RNA–Protein interactions for RNA: ENST00000607814.5

CTSA-218, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-218ENST00000607814 TMEM18Q96B42 140 aa8.66□□□□□ -1.02
CTSA-218ENST00000607814 CSDC2Q9Y534 153 aaKnown RBP8.66□□□□□ -1.02
CTSA-218ENST00000607814 PHOX2AO14813 284 aa8.65□□□□□ -1.02
CTSA-218ENST00000607814 RAB5AP20339 215 aa8.65□□□□□ -1.02
CTSA-218ENST00000607814 IGHV1-58A0A0C4DH39 117 aa8.64□□□□□ -1.03
CTSA-218ENST00000607814 IGKV2-24A0A0C4DH68 120 aa8.64□□□□□ -1.03
CTSA-218ENST00000607814 C1orf196B1AJZ1 125 aa8.64□□□□□ -1.03
CTSA-218ENST00000607814 ZC2HC1BQ5TFG8 222 aa8.64□□□□□ -1.03
CTSA-218ENST00000607814 TIMM21Q9BVV7 248 aa8.64□□□□□ -1.03
CTSA-218ENST00000607814 MAP1LC3AQ9H492 121 aa8.64□□□□□ -1.03
CTSA-218ENST00000607814 MALP21145 153 aa8.63□□□□□ -1.03
CTSA-218ENST00000607814 IGLV4-69A0A075B6H9 119 aa8.62□□□□□ -1.03
CTSA-218ENST00000607814 A0A087WYN8 130 aa8.62□□□□□ -1.03
CTSA-218ENST00000607814 ZNF561-AS1K7EIQ3 104 aa8.62□□□□□ -1.03
CTSA-218ENST00000607814 COX7A2LO14548 114 aa8.62□□□□□ -1.03
CTSA-218ENST00000607814 SCO1O75880 301 aa8.62□□□□□ -1.03
CTSA-218ENST00000607814 SMAGPQ0VAQ4 97 aa8.62□□□□□ -1.03
CTSA-218ENST00000607814 MAJINQ3KP22 176 aa8.62□□□□□ -1.03
CTSA-218ENST00000607814 CBLN2Q8IUK8 224 aa8.62□□□□□ -1.03
CTSA-218ENST00000607814 SPANXA1Q9NS26 97 aa8.62□□□□□ -1.03
CTSA-218ENST00000607814 A0A096LNI7 61 aa8.61□□□□□ -1.03
CTSA-218ENST00000607814 IFITM10A6NMD0 228 aa8.61□□□□□ -1.03
CTSA-218ENST00000607814 PRSS47A8MTI9 375 aa8.61□□□□□ -1.03
CTSA-218ENST00000607814 IFI27P40305 119 aaPredicted RBP8.61□□□□□ -1.03
CTSA-218ENST00000607814 COX19Q49B96 90 aa8.61□□□□□ -1.03
CTSA-218ENST00000607814 Q8N8P6 123 aa8.61□□□□□ -1.03
CTSA-218ENST00000607814 SPACA4Q8TDM5 124 aa8.61□□□□□ -1.03
CTSA-218ENST00000607814 IGLV4-3A0A075B6K6 122 aa8.6□□□□□ -1.03
CTSA-218ENST00000607814 SYCNQ0VAF6 134 aa8.6□□□□□ -1.03
CTSA-218ENST00000607814 CIRBPQ14011 172 aaKnown RBP8.6□□□□□ -1.03
CTSA-218ENST00000607814 CARD19Q96LW7 228 aa8.6□□□□□ -1.03
CTSA-218ENST00000607814 YPEL4Q96NS1 127 aa8.6□□□□□ -1.03
CTSA-218ENST00000607814 A0A0J9YXV3 536 aa8.59□□□□□ -1.03
CTSA-218ENST00000607814 MRPS36P82909 103 aaKnown RBP8.59□□□□□ -1.03
CTSA-218ENST00000607814 C2orf66Q6UXQ4 117 aa8.59□□□□□ -1.03
CTSA-218ENST00000607814 LAMTOR2Q9Y2Q5 125 aa8.59□□□□□ -1.03
CTSA-218ENST00000607814 COLCA2A8K830 154 aa8.57□□□□□ -1.04
CTSA-218ENST00000607814 SPAG11BQ08648 103 aa8.57□□□□□ -1.04
CTSA-218ENST00000607814 STPG4Q8N801 248 aa8.57□□□□□ -1.04
CTSA-218ENST00000607814 CAMK2N2Q96S95 79 aa8.57□□□□□ -1.04
CTSA-218ENST00000607814 IGHV3OR16-9A0A0B4J2B5 98 aa8.56□□□□□ -1.04
CTSA-218ENST00000607814 GAGE2BQ13066 116 aa8.56□□□□□ -1.04
CTSA-218ENST00000607814 LINC00242Q5T6M2 205 aa8.56□□□□□ -1.04
CTSA-218ENST00000607814 ORAOV1Q8WV07 137 aa8.56□□□□□ -1.04
CTSA-218ENST00000607814 TMEM141Q96I45 108 aa8.56□□□□□ -1.04
CTSA-218ENST00000607814 CYSLTR1Q9Y271 337 aa8.56□□□□□ -1.04
CTSA-218ENST00000607814 PYGO1Q9Y3Y4 419 aa8.56□□□□□ -1.04
CTSA-218ENST00000607814 TGIF2-C20orf24A0A0A6YYL0 155 aa8.55□□□□□ -1.04
CTSA-218ENST00000607814 MT-ND6P03923 174 aa8.55□□□□□ -1.04
CTSA-218ENST00000607814 ORMDL2Q53FV1 153 aa8.55□□□□□ -1.04
CTSA-218ENST00000607814 PLAC8Q9NZF1 115 aa8.55□□□□□ -1.04
CTSA-218ENST00000607814 APOMO95445 188 aa8.54□□□□□ -1.04
CTSA-218ENST00000607814 FABP9Q0Z7S8 132 aa8.54□□□□□ -1.04
CTSA-218ENST00000607814 C10orf25Q5T742 122 aa8.54□□□□□ -1.04
CTSA-218ENST00000607814 TEX43Q6ZNM6 134 aa8.54□□□□□ -1.04
CTSA-218ENST00000607814 LINC00173Q6ZV60 143 aa8.54□□□□□ -1.04
CTSA-218ENST00000607814 ALKBH7Q9BT30 221 aaPredicted RBP8.54□□□□□ -1.04
CTSA-218ENST00000607814 GNB1LQ9BYB4 327 aa8.54□□□□□ -1.04
CTSA-218ENST00000607814 MRPL18Q9H0U6 180 aaKnown RBP8.54□□□□□ -1.04
CTSA-218ENST00000607814 NXT2Q9NPJ8 142 aaKnown RBP8.54□□□□□ -1.04
CTSA-218ENST00000607814 IGIPA6NJ69 53 aa8.53□□□□□ -1.04
CTSA-218ENST00000607814 UBE2D1P51668 147 aa8.53□□□□□ -1.04
CTSA-218ENST00000607814 UNQ6190/PRO20217Q6UXQ8 127 aa8.53□□□□□ -1.04
CTSA-218ENST00000607814 VCX2Q9H322 139 aa8.53□□□□□ -1.04
CTSA-218ENST00000607814 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.52□□□□□ -1.05
CTSA-218ENST00000607814 AMELXQ99217 191 aa8.52□□□□□ -1.05
CTSA-218ENST00000607814 LOC107984640A0A0U1RRK4 108 aa8.51□□□□□ -1.05
CTSA-218ENST00000607814 A0A1W2PNN7 141 aa8.51□□□□□ -1.05
CTSA-218ENST00000607814 PTTG1IPP53801 180 aa8.51□□□□□ -1.05
CTSA-218ENST00000607814 RPL18AQ02543 176 aaKnown RBP8.51□□□□□ -1.05
CTSA-218ENST00000607814 Q6ZN92 141 aa8.51□□□□□ -1.05
CTSA-218ENST00000607814 C2orf48Q96LS8 159 aa8.51□□□□□ -1.05
CTSA-218ENST00000607814 C2orf88Q9BSF0 95 aa8.51□□□□□ -1.05
CTSA-218ENST00000607814 A0A087WZ39 114 aa8.5□□□□□ -1.05
CTSA-218ENST00000607814 C2orf82Q6UX34 121 aa8.5□□□□□ -1.05
CTSA-218ENST00000607814 OR10D4PQ8NGN7 298 aa8.5□□□□□ -1.05
CTSA-218ENST00000607814 TOMM6Q96B49 74 aa8.5□□□□□ -1.05
CTSA-218ENST00000607814 LINC01600Q96MT4 127 aa8.5□□□□□ -1.05
CTSA-218ENST00000607814 SCGB3A1Q96QR1 104 aa8.5□□□□□ -1.05
CTSA-218ENST00000607814 KIAA0087Q14695 138 aa8.49□□□□□ -1.05
CTSA-218ENST00000607814 C6orf48Q9UBA6 75 aa8.49□□□□□ -1.05
CTSA-218ENST00000607814 TRAPPC1Q9Y5R8 145 aa8.49□□□□□ -1.05
CTSA-218ENST00000607814 K7EMI3 77 aa8.48□□□□□ -1.05
CTSA-218ENST00000607814 C7orf33Q8WU49 177 aa8.48□□□□□ -1.05
CTSA-218ENST00000607814 TOMM7Q9P0U1 55 aa8.48□□□□□ -1.05
CTSA-218ENST00000607814 NDUFA1O15239 70 aa8.47□□□□□ -1.05
CTSA-218ENST00000607814 C9orf116Q5BN46 136 aaPredicted RBP8.47□□□□□ -1.05
CTSA-218ENST00000607814 FA2HQ7L5A8 372 aa8.47□□□□□ -1.05
CTSA-218ENST00000607814 TIMM17AQ99595 171 aa8.47□□□□□ -1.05
CTSA-218ENST00000607814 LINC00474Q9P2X8 69 aa8.47□□□□□ -1.05
CTSA-218ENST00000607814 FAM168BA1KXE4 195 aa8.46□□□□□ -1.06
CTSA-218ENST00000607814 TRGC2P03986 189 aa8.46□□□□□ -1.06
CTSA-218ENST00000607814 PMCHL1Q16048 86 aa8.46□□□□□ -1.06
CTSA-218ENST00000607814 GAGE2EQ4V326 116 aa8.46□□□□□ -1.06
CTSA-218ENST00000607814 Q6ZRP5 223 aa8.46□□□□□ -1.06
CTSA-218ENST00000607814 ERASQ7Z444 233 aa8.46□□□□□ -1.06
CTSA-218ENST00000607814 URB1-AS1Q96HZ7 61 aa8.46□□□□□ -1.06
CTSA-218ENST00000607814 MRPL35Q9NZE8 188 aaKnown RBP8.46□□□□□ -1.06
CTSA-218ENST00000607814 GAGE2DQ9UEU5 116 aa8.46□□□□□ -1.06
CTSA-218ENST00000607814 CDKN2A-AS1Q9UH64 79 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms