RNA–Protein interactions for RNA: ENST00000597146.1

LIG1-214, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-214ENST00000597146 TIMM21Q9BVV7 248 aa9.58□□□□□ -0.88
LIG1-214ENST00000597146 CTDSP1Q9GZU7 261 aa9.58□□□□□ -0.88
LIG1-214ENST00000597146 MAP1LC3AQ9H492 121 aa9.58□□□□□ -0.88
LIG1-214ENST00000597146 TMEM218A2RU14 115 aa9.57□□□□□ -0.88
LIG1-214ENST00000597146 COX6A2Q02221 97 aa9.57□□□□□ -0.88
LIG1-214ENST00000597146 SRSF9Q13242 221 aaKnown RBP eCLIP9.57□□□□□ -0.88
LIG1-214ENST00000597146 PKIGQ9Y2B9 76 aa9.57□□□□□ -0.88
LIG1-214ENST00000597146 GVQW2A0A096LPI5 108 aaPredicted RBP9.56□□□□□ -0.88
LIG1-214ENST00000597146 APOMO95445 188 aa9.56□□□□□ -0.88
LIG1-214ENST00000597146 S100PP25815 95 aa9.56□□□□□ -0.88
LIG1-214ENST00000597146 RPL39P62891 51 aaKnown RBP9.56□□□□□ -0.88
LIG1-214ENST00000597146 STPG4Q8N801 248 aa9.56□□□□□ -0.88
LIG1-214ENST00000597146 SPANXA1Q9NS26 97 aa9.56□□□□□ -0.88
LIG1-214ENST00000597146 LAMTOR2Q9Y2Q5 125 aa9.56□□□□□ -0.88
LIG1-214ENST00000597146 IFI27P40305 119 aaPredicted RBP9.55□□□□□ -0.88
LIG1-214ENST00000597146 Q6ZUT4 128 aa9.55□□□□□ -0.88
LIG1-214ENST00000597146 C5orf38Q86SI9 138 aa9.55□□□□□ -0.88
LIG1-214ENST00000597146 LINC00526Q96FQ7 95 aa9.55□□□□□ -0.88
LIG1-214ENST00000597146 IMMP2LQ96T52 175 aa9.55□□□□□ -0.88
LIG1-214ENST00000597146 IFITM2Q01629 132 aa9.54□□□□□ -0.88
LIG1-214ENST00000597146 SYCNQ0VAF6 134 aa9.54□□□□□ -0.88
LIG1-214ENST00000597146 COMMD7Q86VX2 200 aa9.54□□□□□ -0.88
LIG1-214ENST00000597146 PRSS3P2Q8NHM4 247 aa9.54□□□□□ -0.88
LIG1-214ENST00000597146 FSIP2Q5CZC0 6907 aa9.54□□□□□ -0.88
LIG1-214ENST00000597146 IFITM10A6NMD0 228 aa9.53□□□□□ -0.88
LIG1-214ENST00000597146 CARD19Q96LW7 228 aa9.53□□□□□ -0.88
LIG1-214ENST00000597146 OPRPNQ99935 248 aaPredicted RBP9.53□□□□□ -0.88
LIG1-214ENST00000597146 Q8N8P6 123 aa9.52□□□□□ -0.89
LIG1-214ENST00000597146 SEC11CQ9BY50 192 aa9.52□□□□□ -0.89
LIG1-214ENST00000597146 G0S2P27469 103 aa9.51□□□□□ -0.89
LIG1-214ENST00000597146 MRPS36P82909 103 aaKnown RBP9.51□□□□□ -0.89
LIG1-214ENST00000597146 CAMK2N2Q96S95 79 aa9.51□□□□□ -0.89
LIG1-214ENST00000597146 LINC00474Q9P2X8 69 aa9.51□□□□□ -0.89
LIG1-214ENST00000597146 IGLV4-69A0A075B6H9 119 aa9.5□□□□□ -0.89
LIG1-214ENST00000597146 A0A096LNI7 61 aa9.5□□□□□ -0.89
LIG1-214ENST00000597146 ORMDL2Q53FV1 153 aa9.5□□□□□ -0.89
LIG1-214ENST00000597146 Q6ZN92 141 aa9.5□□□□□ -0.89
LIG1-214ENST00000597146 NXT2Q9NPJ8 142 aaKnown RBP9.5□□□□□ -0.89
LIG1-214ENST00000597146 CYSLTR1Q9Y271 337 aa9.5□□□□□ -0.89
LIG1-214ENST00000597146 TRAV9-1A0A075B6T8 112 aa9.49□□□□□ -0.89
LIG1-214ENST00000597146 TGIF2-C20orf24A0A0A6YYL0 155 aa9.49□□□□□ -0.89
LIG1-214ENST00000597146 PRSS47A8MTI9 375 aa9.49□□□□□ -0.89
LIG1-214ENST00000597146 Q6ZRP5 223 aa9.49□□□□□ -0.89
LIG1-214ENST00000597146 C2orf88Q9BSF0 95 aa9.49□□□□□ -0.89
LIG1-214ENST00000597146 VCX2Q9H322 139 aa9.49□□□□□ -0.89
LIG1-214ENST00000597146 ADCYAP1P18509 176 aa9.48□□□□□ -0.89
LIG1-214ENST00000597146 GAGE2BQ13066 116 aa9.48□□□□□ -0.89
LIG1-214ENST00000597146 PRR4Q16378 134 aa9.48□□□□□ -0.89
LIG1-214ENST00000597146 KIAA1644Q3SXP7 199 aa9.48□□□□□ -0.89
LIG1-214ENST00000597146 TEX43Q6ZNM6 134 aa9.48□□□□□ -0.89
LIG1-214ENST00000597146 TMEM141Q96I45 108 aa9.48□□□□□ -0.89
LIG1-214ENST00000597146 RPS10P5Q9NQ39 176 aa9.48□□□□□ -0.89
LIG1-214ENST00000597146 PYGO1Q9Y3Y4 419 aa9.48□□□□□ -0.89
LIG1-214ENST00000597146 LOC107984640A0A0U1RRK4 108 aa9.47□□□□□ -0.89
LIG1-214ENST00000597146 K7EMI3 77 aa9.47□□□□□ -0.89
LIG1-214ENST00000597146 SPAG11BQ08648 103 aa9.47□□□□□ -0.89
LIG1-214ENST00000597146 C2orf66Q6UXQ4 117 aa9.47□□□□□ -0.89
LIG1-214ENST00000597146 ORAOV1Q8WV07 137 aa9.47□□□□□ -0.89
LIG1-214ENST00000597146 COX19Q49B96 90 aa9.46□□□□□ -0.9
LIG1-214ENST00000597146 PRR26Q8N8Z3 221 aa9.46□□□□□ -0.9
LIG1-214ENST00000597146 C2orf48Q96LS8 159 aa9.46□□□□□ -0.9
LIG1-214ENST00000597146 IGLV4-3A0A075B6K6 122 aa9.45□□□□□ -0.9
LIG1-214ENST00000597146 PAPPA-AS1Q5QFB9 102 aa9.45□□□□□ -0.9
LIG1-214ENST00000597146 OR10D4PQ8NGN7 298 aa9.45□□□□□ -0.9
LIG1-214ENST00000597146 FABP9Q0Z7S8 132 aa9.44□□□□□ -0.9
LIG1-214ENST00000597146 NDUFA5Q16718 116 aa9.44□□□□□ -0.9
LIG1-214ENST00000597146 GNB1LQ9BYB4 327 aa9.44□□□□□ -0.9
LIG1-214ENST00000597146 PSORS1C2Q9UIG4 136 aa9.44□□□□□ -0.9
LIG1-214ENST00000597146 IGHV3OR16-9A0A0B4J2B5 98 aa9.43□□□□□ -0.9
LIG1-214ENST00000597146 F8WDY8 70 aa9.43□□□□□ -0.9
LIG1-214ENST00000597146 NDUFA1O15239 70 aa9.43□□□□□ -0.9
LIG1-214ENST00000597146 RHEBQ15382 184 aa9.43□□□□□ -0.9
LIG1-214ENST00000597146 RPL18AQ02543 176 aaKnown RBP9.42□□□□□ -0.9
LIG1-214ENST00000597146 FAM104AQ969W3 186 aa9.42□□□□□ -0.9
LIG1-214ENST00000597146 SMCO4Q9NRQ5 59 aa9.42□□□□□ -0.9
LIG1-214ENST00000597146 PRSS2P07478 247 aa9.41□□□□□ -0.9
LIG1-214ENST00000597146 LINC00242Q5T6M2 205 aa9.41□□□□□ -0.9
LIG1-214ENST00000597146 FA2HQ7L5A8 372 aa9.41□□□□□ -0.9
LIG1-214ENST00000597146 SCGB3A1Q96QR1 104 aa9.41□□□□□ -0.9
LIG1-214ENST00000597146 APOC3P02656 99 aa9.4□□□□□ -0.9
LIG1-214ENST00000597146 MT-ND6P03923 174 aa9.4□□□□□ -0.9
LIG1-214ENST00000597146 NPSP0C0P6 89 aa9.4□□□□□ -0.9
LIG1-214ENST00000597146 PTTG1IPP53801 180 aa9.4□□□□□ -0.9
LIG1-214ENST00000597146 SEC11AP67812 179 aa9.4□□□□□ -0.9
LIG1-214ENST00000597146 RNF151Q2KHN1 245 aa9.4□□□□□ -0.9
LIG1-214ENST00000597146 ZC2HC1BQ5TFG8 222 aa9.4□□□□□ -0.9
LIG1-214ENST00000597146 MRPL18Q9H0U6 180 aaKnown RBP9.4□□□□□ -0.9
LIG1-214ENST00000597146 GEMIN7Q9H840 131 aaKnown RBP9.4□□□□□ -0.9
LIG1-214ENST00000597146 CRCT1Q9UGL9 99 aa9.4□□□□□ -0.9
LIG1-214ENST00000597146 CARHSP1Q9Y2V2 147 aaKnown RBP9.4□□□□□ -0.9
LIG1-214ENST00000597146 A0A087WZ39 114 aa9.39□□□□□ -0.91
LIG1-214ENST00000597146 UBE2D1P51668 147 aa9.39□□□□□ -0.91
LIG1-214ENST00000597146 C10orf91Q5T1B1 145 aa9.39□□□□□ -0.91
LIG1-214ENST00000597146 PACRGQ96M98 296 aaPredicted RBP9.39□□□□□ -0.91
LIG1-214ENST00000597146 LINC01549A6NIU2 74 aa9.38□□□□□ -0.91
LIG1-214ENST00000597146 IGIPA6NJ69 53 aa9.38□□□□□ -0.91
LIG1-214ENST00000597146 C6orf226Q5I0X4 101 aa9.38□□□□□ -0.91
LIG1-214ENST00000597146 UNQ6190/PRO20217Q6UXQ8 127 aa9.38□□□□□ -0.91
LIG1-214ENST00000597146 TOMM6Q96B49 74 aa9.38□□□□□ -0.91
LIG1-214ENST00000597146 ALKBH7Q9BT30 221 aaPredicted RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 152 ms