RNA–Protein interactions for RNA: ENST00000595689.2

SSX4-201, Transcript of SSX family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX4, Length 1,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4-201ENST00000595689 TIMM21Q9BVV7 248 aa3.69□□□□□ -1.82
SSX4-201ENST00000595689 FLG2Q5D862 2391 aaPredicted RBP3.69□□□□□ -1.82
SSX4-201ENST00000595689 LRP1Q07954 4544 aaKnown RBP3.69□□□□□ -1.82
SSX4-201ENST00000595689 ZNF561-AS1K7EIQ3 104 aa3.68□□□□□ -1.82
SSX4-201ENST00000595689 COX7A2LO14548 114 aa3.68□□□□□ -1.82
SSX4-201ENST00000595689 PPBPP02775 128 aa3.68□□□□□ -1.82
SSX4-201ENST00000595689 MALP21145 153 aa3.68□□□□□ -1.82
SSX4-201ENST00000595689 SYCNQ0VAF6 134 aa3.68□□□□□ -1.82
SSX4-201ENST00000595689 SMAGPQ0VAQ4 97 aa3.68□□□□□ -1.82
SSX4-201ENST00000595689 TMEM136Q6ZRR5 245 aa3.68□□□□□ -1.82
SSX4-201ENST00000595689 Q6ZRU5 148 aa3.68□□□□□ -1.82
SSX4-201ENST00000595689 C5orf38Q86SI9 138 aa3.68□□□□□ -1.82
SSX4-201ENST00000595689 STPG4Q8N801 248 aa3.68□□□□□ -1.82
SSX4-201ENST00000595689 ANAPC16Q96DE5 110 aa3.68□□□□□ -1.82
SSX4-201ENST00000595689 DPH3Q96FX2 82 aa3.68□□□□□ -1.82
SSX4-201ENST00000595689 PRELID3AQ96N28 172 aa3.68□□□□□ -1.82
SSX4-201ENST00000595689 SPANXA1Q9NS26 97 aa3.68□□□□□ -1.82
SSX4-201ENST00000595689 LOC389332A0A1B0GUA5 103 aa3.67□□□□□ -1.82
SSX4-201ENST00000595689 PRSS47A8MTI9 375 aa3.67□□□□□ -1.82
SSX4-201ENST00000595689 OXTP01178 125 aa3.67□□□□□ -1.82
SSX4-201ENST00000595689 MT-ND4LP03901 98 aa3.67□□□□□ -1.82
SSX4-201ENST00000595689 MRPS36P82909 103 aaKnown RBP3.67□□□□□ -1.82
SSX4-201ENST00000595689 SPAG11BQ08648 103 aa3.67□□□□□ -1.82
SSX4-201ENST00000595689 SRRM2Q9UQ35 2752 aaKnown RBP3.66□□□□□ -1.82
SSX4-201ENST00000595689 IGLV4-3A0A075B6K6 122 aa3.66□□□□□ -1.82
SSX4-201ENST00000595689 IGHV3OR16-9A0A0B4J2B5 98 aa3.66□□□□□ -1.82
SSX4-201ENST00000595689 IFITM10A6NMD0 228 aa3.66□□□□□ -1.82
SSX4-201ENST00000595689 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.66□□□□□ -1.82
SSX4-201ENST00000595689 IFI27P40305 119 aaPredicted RBP3.66□□□□□ -1.82
SSX4-201ENST00000595689 PTTG1IPP53801 180 aa3.66□□□□□ -1.82
SSX4-201ENST00000595689 PRR3P79522 188 aaKnown RBP3.66□□□□□ -1.82
SSX4-201ENST00000595689 C7orf33Q8WU49 177 aa3.66□□□□□ -1.82
SSX4-201ENST00000595689 CAMK2N2Q96S95 79 aa3.66□□□□□ -1.82
SSX4-201ENST00000595689 MAP1LC3AQ9H492 121 aa3.66□□□□□ -1.82
SSX4-201ENST00000595689 LAMTOR2Q9Y2Q5 125 aa3.66□□□□□ -1.82
SSX4-201ENST00000595689 A0A0J9YXV3 536 aa3.65□□□□□ -1.83
SSX4-201ENST00000595689 LOC107984640A0A0U1RRK4 108 aa3.65□□□□□ -1.83
SSX4-201ENST00000595689 TMEM218A2RU14 115 aa3.65□□□□□ -1.83
SSX4-201ENST00000595689 APOMO95445 188 aa3.65□□□□□ -1.83
SSX4-201ENST00000595689 MT1HL1P0DM35 61 aa3.65□□□□□ -1.83
SSX4-201ENST00000595689 RAB5AP20339 215 aa3.65□□□□□ -1.83
SSX4-201ENST00000595689 GAGE2BQ13066 116 aa3.65□□□□□ -1.83
SSX4-201ENST00000595689 KIAA1644Q3SXP7 199 aa3.65□□□□□ -1.83
SSX4-201ENST00000595689 LINC00242Q5T6M2 205 aa3.65□□□□□ -1.83
SSX4-201ENST00000595689 ZC2HC1BQ5TFG8 222 aa3.65□□□□□ -1.83
SSX4-201ENST00000595689 UQCC3Q6UW78 93 aa3.65□□□□□ -1.83
SSX4-201ENST00000595689 C2orf66Q6UXQ4 117 aa3.65□□□□□ -1.83
SSX4-201ENST00000595689 LINC00173Q6ZV60 143 aa3.65□□□□□ -1.83
SSX4-201ENST00000595689 Q8N8P6 123 aa3.65□□□□□ -1.83
SSX4-201ENST00000595689 ORAOV1Q8WV07 137 aa3.65□□□□□ -1.83
SSX4-201ENST00000595689 C2orf48Q96LS8 159 aa3.65□□□□□ -1.83
SSX4-201ENST00000595689 LINC00474Q9P2X8 69 aa3.65□□□□□ -1.83
SSX4-201ENST00000595689 PKIGQ9Y2B9 76 aa3.65□□□□□ -1.83
SSX4-201ENST00000595689 PYGO1Q9Y3Y4 419 aa3.65□□□□□ -1.83
SSX4-201ENST00000595689 A0A1W2PNN7 141 aa3.64□□□□□ -1.83
SSX4-201ENST00000595689 UBE2D1P51668 147 aa3.64□□□□□ -1.83
SSX4-201ENST00000595689 RPL18AQ02543 176 aaKnown RBP3.64□□□□□ -1.83
SSX4-201ENST00000595689 C10orf25Q5T742 122 aa3.64□□□□□ -1.83
SSX4-201ENST00000595689 OR10D4PQ8NGN7 298 aa3.64□□□□□ -1.83
SSX4-201ENST00000595689 TMEM141Q96I45 108 aa3.64□□□□□ -1.83
SSX4-201ENST00000595689 IMMP2LQ96T52 175 aa3.64□□□□□ -1.83
SSX4-201ENST00000595689 CTDSP1Q9GZU7 261 aa3.64□□□□□ -1.83
SSX4-201ENST00000595689 CYSLTR1Q9Y271 337 aa3.64□□□□□ -1.83
SSX4-201ENST00000595689 HMCN2Q8NDA2 5059 aa3.64□□□□□ -1.83
SSX4-201ENST00000595689 A0A087WZ39 114 aa3.63□□□□□ -1.83
SSX4-201ENST00000595689 TGIF2-C20orf24A0A0A6YYL0 155 aa3.63□□□□□ -1.83
SSX4-201ENST00000595689 IGIPA6NJ69 53 aa3.63□□□□□ -1.83
SSX4-201ENST00000595689 KIAA0087Q14695 138 aa3.63□□□□□ -1.83
SSX4-201ENST00000595689 RNF151Q2KHN1 245 aa3.63□□□□□ -1.83
SSX4-201ENST00000595689 ORMDL2Q53FV1 153 aa3.63□□□□□ -1.83
SSX4-201ENST00000595689 C9orf116Q5BN46 136 aaPredicted RBP3.63□□□□□ -1.83
SSX4-201ENST00000595689 LCE1DQ5T752 114 aa3.63□□□□□ -1.83
SSX4-201ENST00000595689 UNQ6190/PRO20217Q6UXQ8 127 aa3.63□□□□□ -1.83
SSX4-201ENST00000595689 TEX43Q6ZNM6 134 aa3.63□□□□□ -1.83
SSX4-201ENST00000595689 COMMD7Q86VX2 200 aa3.63□□□□□ -1.83
SSX4-201ENST00000595689 AMELXQ99217 191 aa3.63□□□□□ -1.83
SSX4-201ENST00000595689 SEC11CQ9BY50 192 aa3.63□□□□□ -1.83
SSX4-201ENST00000595689 MRPL35Q9NZE8 188 aaKnown RBP3.63□□□□□ -1.83
SSX4-201ENST00000595689 C6orf48Q9UBA6 75 aa3.63□□□□□ -1.83
SSX4-201ENST00000595689 TRAV9-1A0A075B6T8 112 aa3.62□□□□□ -1.83
SSX4-201ENST00000595689 FAM168BA1KXE4 195 aa3.62□□□□□ -1.83
SSX4-201ENST00000595689 F8WDY8 70 aa3.62□□□□□ -1.83
SSX4-201ENST00000595689 K7EMI3 77 aa3.62□□□□□ -1.83
SSX4-201ENST00000595689 NDUFA1O15239 70 aa3.62□□□□□ -1.83
SSX4-201ENST00000595689 C2orf82Q6UX34 121 aa3.62□□□□□ -1.83
SSX4-201ENST00000595689 Q6ZRP5 223 aa3.62□□□□□ -1.83
SSX4-201ENST00000595689 PHF5AQ7RTV0 110 aaKnown RBP3.62□□□□□ -1.83
SSX4-201ENST00000595689 C2orf88Q9BSF0 95 aa3.62□□□□□ -1.83
SSX4-201ENST00000595689 NXT2Q9NPJ8 142 aaKnown RBP3.62□□□□□ -1.83
SSX4-201ENST00000595689 DMBT1Q9UGM3 2413 aaPredicted RBP3.62□□□□□ -1.83
SSX4-201ENST00000595689 NPSP0C0P6 89 aa3.61□□□□□ -1.83
SSX4-201ENST00000595689 TLX1NBP0CAT3 122 aa3.61□□□□□ -1.83
SSX4-201ENST00000595689 ODF1Q14990 250 aa3.61□□□□□ -1.83
SSX4-201ENST00000595689 C10orf91Q5T1B1 145 aa3.61□□□□□ -1.83
SSX4-201ENST00000595689 SERTAD4-AS1Q5TG53 156 aa3.61□□□□□ -1.83
SSX4-201ENST00000595689 Q6ZN92 141 aa3.61□□□□□ -1.83
SSX4-201ENST00000595689 FAM19A3Q7Z5A8 133 aa3.61□□□□□ -1.83
SSX4-201ENST00000595689 KRTAP11-1Q8IUC1 163 aa3.61□□□□□ -1.83
SSX4-201ENST00000595689 KRTAP7-1Q8IUC3 87 aa3.61□□□□□ -1.83
SSX4-201ENST00000595689 TOMM6Q96B49 74 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms