RNA–Protein interactions for RNA: ENST00000574294.5

TVP23B-207, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 5

Gene TVP23B, Length 1,049 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-207ENST00000574294 UQCC3Q6UW78 93 aa10.43□□□□□ -0.74
TVP23B-207ENST00000574294 STPG4Q8N801 248 aa10.43□□□□□ -0.74
TVP23B-207ENST00000574294 PYGO1Q9Y3Y4 419 aa10.43□□□□□ -0.74
TVP23B-207ENST00000574294 A0A096LNI7 61 aa10.42□□□□□ -0.74
TVP23B-207ENST00000574294 K7EMI3 77 aa10.42□□□□□ -0.74
TVP23B-207ENST00000574294 Q6ZRU5 148 aa10.42□□□□□ -0.74
TVP23B-207ENST00000574294 OR10D4PQ8NGN7 298 aa10.42□□□□□ -0.74
TVP23B-207ENST00000574294 IMMP2LQ96T52 175 aa10.42□□□□□ -0.74
TVP23B-207ENST00000574294 MAP1LC3AQ9H492 121 aa10.42□□□□□ -0.74
TVP23B-207ENST00000574294 LOC107984640A0A0U1RRK4 108 aa10.41□□□□□ -0.74
TVP23B-207ENST00000574294 LINC00526Q96FQ7 95 aa10.41□□□□□ -0.74
TVP23B-207ENST00000574294 CAMK2N2Q96S95 79 aa10.41□□□□□ -0.74
TVP23B-207ENST00000574294 IFITM10A6NMD0 228 aa10.4□□□□□ -0.74
TVP23B-207ENST00000574294 RNF151Q2KHN1 245 aa10.4□□□□□ -0.74
TVP23B-207ENST00000574294 C5orf38Q86SI9 138 aa10.4□□□□□ -0.74
TVP23B-207ENST00000574294 IGHV3OR16-9A0A0B4J2B5 98 aa10.39□□□□□ -0.75
TVP23B-207ENST00000574294 SERTAD4-AS1Q5TG53 156 aa10.39□□□□□ -0.75
TVP23B-207ENST00000574294 CTDSP1Q9GZU7 261 aa10.39□□□□□ -0.75
TVP23B-207ENST00000574294 TRAV9-1A0A075B6T8 112 aa10.38□□□□□ -0.75
TVP23B-207ENST00000574294 NPSP0C0P6 89 aa10.38□□□□□ -0.75
TVP23B-207ENST00000574294 G0S2P27469 103 aa10.38□□□□□ -0.75
TVP23B-207ENST00000574294 PTTG1IPP53801 180 aa10.38□□□□□ -0.75
TVP23B-207ENST00000574294 SPAG11BQ08648 103 aa10.38□□□□□ -0.75
TVP23B-207ENST00000574294 ORMDL2Q53FV1 153 aa10.38□□□□□ -0.75
TVP23B-207ENST00000574294 Q8N8P6 123 aa10.38□□□□□ -0.75
TVP23B-207ENST00000574294 FAM104AQ969W3 186 aa10.38□□□□□ -0.75
TVP23B-207ENST00000574294 TGIF2-C20orf24A0A0A6YYL0 155 aa10.37□□□□□ -0.75
TVP23B-207ENST00000574294 HNRNPA3P51991 378 aaKnown RBP10.37□□□□□ -0.75
TVP23B-207ENST00000574294 TMEM141Q96I45 108 aa10.37□□□□□ -0.75
TVP23B-207ENST00000574294 CYSLTR1Q9Y271 337 aa10.37□□□□□ -0.75
TVP23B-207ENST00000574294 LOC389332A0A1B0GUA5 103 aa10.36□□□□□ -0.75
TVP23B-207ENST00000574294 TMEM218A2RU14 115 aa10.36□□□□□ -0.75
TVP23B-207ENST00000574294 OPRPNQ99935 248 aaPredicted RBP10.36□□□□□ -0.75
TVP23B-207ENST00000574294 NXT2Q9NPJ8 142 aaKnown RBP10.36□□□□□ -0.75
TVP23B-207ENST00000574294 MRPL35Q9NZE8 188 aaKnown RBP10.36□□□□□ -0.75
TVP23B-207ENST00000574294 IGLV4-3A0A075B6K6 122 aa10.35□□□□□ -0.75
TVP23B-207ENST00000574294 Q6ZN92 141 aa10.35□□□□□ -0.75
TVP23B-207ENST00000574294 TEX43Q6ZNM6 134 aa10.35□□□□□ -0.75
TVP23B-207ENST00000574294 ORAOV1Q8WV07 137 aa10.35□□□□□ -0.75
TVP23B-207ENST00000574294 C2orf88Q9BSF0 95 aa10.35□□□□□ -0.75
TVP23B-207ENST00000574294 A0A087WZ39 114 aa10.34□□□□□ -0.75
TVP23B-207ENST00000574294 NDUFA1O15239 70 aa10.34□□□□□ -0.75
TVP23B-207ENST00000574294 PRR3P79522 188 aaKnown RBP10.34□□□□□ -0.75
TVP23B-207ENST00000574294 GAGE2BQ13066 116 aa10.34□□□□□ -0.75
TVP23B-207ENST00000574294 PAPPA-AS1Q5QFB9 102 aa10.34□□□□□ -0.75
TVP23B-207ENST00000574294 C2orf66Q6UXQ4 117 aa10.34□□□□□ -0.75
TVP23B-207ENST00000574294 LINC01561Q8N1V8 128 aa10.33□□□□□ -0.76
TVP23B-207ENST00000574294 SEC11CQ9BY50 192 aa10.33□□□□□ -0.76
TVP23B-207ENST00000574294 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.32□□□□□ -0.76
TVP23B-207ENST00000574294 S100PP25815 95 aa10.32□□□□□ -0.76
TVP23B-207ENST00000574294 LINC00242Q5T6M2 205 aa10.32□□□□□ -0.76
TVP23B-207ENST00000574294 Q6ZRP5 223 aa10.32□□□□□ -0.76
TVP23B-207ENST00000574294 VCX2Q9H322 139 aa10.32□□□□□ -0.76
TVP23B-207ENST00000574294 LRP1Q07954 4544 aaKnown RBP10.32□□□□□ -0.76
TVP23B-207ENST00000574294 LINC01549A6NIU2 74 aa10.31□□□□□ -0.76
TVP23B-207ENST00000574294 ADCYAP1P18509 176 aa10.31□□□□□ -0.76
TVP23B-207ENST00000574294 IFITM2Q01629 132 aa10.31□□□□□ -0.76
TVP23B-207ENST00000574294 RPL18AQ02543 176 aaKnown RBP10.31□□□□□ -0.76
TVP23B-207ENST00000574294 COX19Q49B96 90 aa10.31□□□□□ -0.76
TVP23B-207ENST00000574294 UBE2D1P51668 147 aa10.3□□□□□ -0.76
TVP23B-207ENST00000574294 SEC11AP67812 179 aa10.3□□□□□ -0.76
TVP23B-207ENST00000574294 TLX1NBP0CAT3 122 aa10.29□□□□□ -0.76
TVP23B-207ENST00000574294 SPINK6Q6UWN8 80 aa10.29□□□□□ -0.76
TVP23B-207ENST00000574294 AMELXQ99217 191 aa10.29□□□□□ -0.76
TVP23B-207ENST00000574294 IGIPA6NJ69 53 aa10.28□□□□□ -0.76
TVP23B-207ENST00000574294 TIMM17AQ99595 171 aa10.28□□□□□ -0.76
TVP23B-207ENST00000574294 GNB1LQ9BYB4 327 aa10.28□□□□□ -0.76
TVP23B-207ENST00000574294 TRBV30A0A0K0K1B3 111 aa10.27□□□□□ -0.77
TVP23B-207ENST00000574294 C9orf116Q5BN46 136 aaPredicted RBP10.27□□□□□ -0.77
TVP23B-207ENST00000574294 FAM19A3Q7Z5A8 133 aa10.27□□□□□ -0.77
TVP23B-207ENST00000574294 PKHD1L1Q86WI1 4243 aa10.26□□□□□ -0.77
TVP23B-207ENST00000574294 MT-ND6P03923 174 aa10.26□□□□□ -0.77
TVP23B-207ENST00000574294 KIAA0087Q14695 138 aa10.26□□□□□ -0.77
TVP23B-207ENST00000574294 REG3GQ6UW15 175 aa10.26□□□□□ -0.77
TVP23B-207ENST00000574294 UNQ6190/PRO20217Q6UXQ8 127 aa10.26□□□□□ -0.77
TVP23B-207ENST00000574294 LINC00173Q6ZV60 143 aa10.26□□□□□ -0.77
TVP23B-207ENST00000574294 FAT3Q8TDW7 4589 aa10.26□□□□□ -0.77
TVP23B-207ENST00000574294 A0A0J9YXV3 536 aa10.25□□□□□ -0.77
TVP23B-207ENST00000574294 A0A1W2PNN7 141 aa10.25□□□□□ -0.77
TVP23B-207ENST00000574294 HERVK_113P63121 156 aa10.25□□□□□ -0.77
TVP23B-207ENST00000574294 RHEBQ15382 184 aa10.25□□□□□ -0.77
TVP23B-207ENST00000574294 COMMD7Q86VX2 200 aa10.25□□□□□ -0.77
TVP23B-207ENST00000574294 TOMM6Q96B49 74 aa10.25□□□□□ -0.77
TVP23B-207ENST00000574294 PACRGQ96M98 296 aaPredicted RBP10.25□□□□□ -0.77
TVP23B-207ENST00000574294 PRSS2P07478 247 aa10.24□□□□□ -0.77
TVP23B-207ENST00000574294 MT1HL1P0DM35 61 aa10.24□□□□□ -0.77
TVP23B-207ENST00000574294 C10orf91Q5T1B1 145 aa10.24□□□□□ -0.77
TVP23B-207ENST00000574294 ERASQ7Z444 233 aa10.24□□□□□ -0.77
TVP23B-207ENST00000574294 C6orf48Q9UBA6 75 aa10.24□□□□□ -0.77
TVP23B-207ENST00000574294 KIAA1644Q3SXP7 199 aa10.23□□□□□ -0.77
TVP23B-207ENST00000574294 C10orf25Q5T742 122 aa10.23□□□□□ -0.77
TVP23B-207ENST00000574294 LINC01600Q96MT4 127 aa10.23□□□□□ -0.77
TVP23B-207ENST00000574294 LINC01546A6NGU7 62 aa10.22□□□□□ -0.77
TVP23B-207ENST00000574294 CKS1BP61024 79 aa10.22□□□□□ -0.77
TVP23B-207ENST00000574294 SRSF9Q13242 221 aaKnown RBP eCLIP10.22□□□□□ -0.77
TVP23B-207ENST00000574294 SCGB3A1Q96QR1 104 aa10.22□□□□□ -0.77
TVP23B-207ENST00000574294 GEMIN7Q9H840 131 aaKnown RBP10.22□□□□□ -0.77
TVP23B-207ENST00000574294 CARHSP1Q9Y2V2 147 aaKnown RBP10.22□□□□□ -0.77
TVP23B-207ENST00000574294 NDUFC2-KCTD14E9PQ53 114 aa10.21□□□□□ -0.77
TVP23B-207ENST00000574294 C6orf226Q5I0X4 101 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms