RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 C10orf91Q5T1B1 145 aa8.03□□□□□ -1.12
NPLOC4-213ENST00000573519 C5orf38Q86SI9 138 aa8.03□□□□□ -1.12
NPLOC4-213ENST00000573519 Q8N8P6 123 aa8.03□□□□□ -1.12
NPLOC4-213ENST00000573519 PKIGQ9Y2B9 76 aa8.03□□□□□ -1.12
NPLOC4-213ENST00000573519 S100PP25815 95 aa8.02□□□□□ -1.13
NPLOC4-213ENST00000573519 RPS10P5Q9NQ39 176 aa8.02□□□□□ -1.13
NPLOC4-213ENST00000573519 LINC00474Q9P2X8 69 aa8.02□□□□□ -1.13
NPLOC4-213ENST00000573519 CARHSP1Q9Y2V2 147 aaKnown RBP8.02□□□□□ -1.13
NPLOC4-213ENST00000573519 APOMO95445 188 aa8.01□□□□□ -1.13
NPLOC4-213ENST00000573519 MRPS36P82909 103 aaKnown RBP8.01□□□□□ -1.13
NPLOC4-213ENST00000573519 CAMK2N2Q96S95 79 aa8.01□□□□□ -1.13
NPLOC4-213ENST00000573519 TRAV9-1A0A075B6T8 112 aa8□□□□□ -1.13
NPLOC4-213ENST00000573519 IFITM10A6NMD0 228 aa8□□□□□ -1.13
NPLOC4-213ENST00000573519 IFI27P40305 119 aaPredicted RBP8□□□□□ -1.13
NPLOC4-213ENST00000573519 GAGE2BQ13066 116 aa8□□□□□ -1.13
NPLOC4-213ENST00000573519 Q6ZRU5 148 aa8□□□□□ -1.13
NPLOC4-213ENST00000573519 LRP1Q07954 4544 aaKnown RBP7.99□□□□□ -1.13
NPLOC4-213ENST00000573519 IGLV4-3A0A075B6K6 122 aa7.99□□□□□ -1.13
NPLOC4-213ENST00000573519 LOC107984640A0A0U1RRK4 108 aa7.99□□□□□ -1.13
NPLOC4-213ENST00000573519 SPAG11BQ08648 103 aa7.99□□□□□ -1.13
NPLOC4-213ENST00000573519 RHEBQ15382 184 aa7.99□□□□□ -1.13
NPLOC4-213ENST00000573519 ZC2HC1BQ5TFG8 222 aa7.99□□□□□ -1.13
NPLOC4-213ENST00000573519 C2orf66Q6UXQ4 117 aa7.99□□□□□ -1.13
NPLOC4-213ENST00000573519 PKHD1L1Q86WI1 4243 aa7.99□□□□□ -1.13
NPLOC4-213ENST00000573519 ORMDL2Q53FV1 153 aa7.98□□□□□ -1.13
NPLOC4-213ENST00000573519 GNB1LQ9BYB4 327 aa7.98□□□□□ -1.13
NPLOC4-213ENST00000573519 NXT2Q9NPJ8 142 aaKnown RBP7.98□□□□□ -1.13
NPLOC4-213ENST00000573519 CYSLTR1Q9Y271 337 aa7.98□□□□□ -1.13
NPLOC4-213ENST00000573519 PYGO1Q9Y3Y4 419 aa7.98□□□□□ -1.13
NPLOC4-213ENST00000573519 FAT3Q8TDW7 4589 aa7.97□□□□□ -1.13
NPLOC4-213ENST00000573519 APOC3P02656 99 aa7.97□□□□□ -1.13
NPLOC4-213ENST00000573519 PTTG1IPP53801 180 aa7.97□□□□□ -1.13
NPLOC4-213ENST00000573519 RPL18AQ02543 176 aaKnown RBP7.97□□□□□ -1.13
NPLOC4-213ENST00000573519 ORAOV1Q8WV07 137 aa7.97□□□□□ -1.13
NPLOC4-213ENST00000573519 TMEM141Q96I45 108 aa7.97□□□□□ -1.13
NPLOC4-213ENST00000573519 C2orf48Q96LS8 159 aa7.97□□□□□ -1.13
NPLOC4-213ENST00000573519 TGIF2-C20orf24A0A0A6YYL0 155 aa7.96□□□□□ -1.14
NPLOC4-213ENST00000573519 IGHV3OR16-9A0A0B4J2B5 98 aa7.96□□□□□ -1.14
NPLOC4-213ENST00000573519 A0A0J9YXV3 536 aa7.96□□□□□ -1.14
NPLOC4-213ENST00000573519 PRR3P79522 188 aaKnown RBP7.96□□□□□ -1.14
NPLOC4-213ENST00000573519 FABP9Q0Z7S8 132 aa7.96□□□□□ -1.14
NPLOC4-213ENST00000573519 SERTAD4-AS1Q5TG53 156 aa7.96□□□□□ -1.14
NPLOC4-213ENST00000573519 OR10D4PQ8NGN7 298 aa7.96□□□□□ -1.14
NPLOC4-213ENST00000573519 ALKBH7Q9BT30 221 aaPredicted RBP7.96□□□□□ -1.14
NPLOC4-213ENST00000573519 MRPL18Q9H0U6 180 aaKnown RBP7.96□□□□□ -1.14
NPLOC4-213ENST00000573519 LINC00242Q5T6M2 205 aa7.95□□□□□ -1.14
NPLOC4-213ENST00000573519 TEX43Q6ZNM6 134 aa7.95□□□□□ -1.14
NPLOC4-213ENST00000573519 IGIPA6NJ69 53 aa7.94□□□□□ -1.14
NPLOC4-213ENST00000573519 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.94□□□□□ -1.14
NPLOC4-213ENST00000573519 VCX2Q9H322 139 aa7.94□□□□□ -1.14
NPLOC4-213ENST00000573519 K7EMI3 77 aa7.93□□□□□ -1.14
NPLOC4-213ENST00000573519 NDUFA1O15239 70 aa7.93□□□□□ -1.14
NPLOC4-213ENST00000573519 UBE2D1P51668 147 aa7.93□□□□□ -1.14
NPLOC4-213ENST00000573519 COX19Q49B96 90 aa7.93□□□□□ -1.14
NPLOC4-213ENST00000573519 Q6ZN92 141 aa7.93□□□□□ -1.14
NPLOC4-213ENST00000573519 LINC00173Q6ZV60 143 aa7.93□□□□□ -1.14
NPLOC4-213ENST00000573519 AMELXQ99217 191 aa7.93□□□□□ -1.14
NPLOC4-213ENST00000573519 C2orf88Q9BSF0 95 aa7.93□□□□□ -1.14
NPLOC4-213ENST00000573519 SNAPINO95295 136 aa7.92□□□□□ -1.14
NPLOC4-213ENST00000573519 MT-ND6P03923 174 aa7.92□□□□□ -1.14
NPLOC4-213ENST00000573519 NDUFA5Q16718 116 aa7.92□□□□□ -1.14
NPLOC4-213ENST00000573519 SVBPQ8N300 66 aa7.92□□□□□ -1.14
NPLOC4-213ENST00000573519 TOMM6Q96B49 74 aa7.92□□□□□ -1.14
NPLOC4-213ENST00000573519 A0A087WZ39 114 aa7.91□□□□□ -1.14
NPLOC4-213ENST00000573519 A0A1W2PNN7 141 aa7.91□□□□□ -1.14
NPLOC4-213ENST00000573519 RNF151Q2KHN1 245 aa7.91□□□□□ -1.14
NPLOC4-213ENST00000573519 C9orf116Q5BN46 136 aaPredicted RBP7.91□□□□□ -1.14
NPLOC4-213ENST00000573519 C10orf25Q5T742 122 aa7.91□□□□□ -1.14
NPLOC4-213ENST00000573519 Q6ZRP5 223 aa7.91□□□□□ -1.14
NPLOC4-213ENST00000573519 SCGB3A1Q96QR1 104 aa7.91□□□□□ -1.14
NPLOC4-213ENST00000573519 MRPL35Q9NZE8 188 aaKnown RBP7.91□□□□□ -1.14
NPLOC4-213ENST00000573519 TRAPPC1Q9Y5R8 145 aa7.91□□□□□ -1.14
NPLOC4-213ENST00000573519 F8WDY8 70 aa7.9□□□□□ -1.14
NPLOC4-213ENST00000573519 MT1HL1P0DM35 61 aa7.9□□□□□ -1.14
NPLOC4-213ENST00000573519 G0S2P27469 103 aa7.9□□□□□ -1.14
NPLOC4-213ENST00000573519 UNQ6190/PRO20217Q6UXQ8 127 aa7.9□□□□□ -1.14
NPLOC4-213ENST00000573519 FA2HQ7L5A8 372 aa7.9□□□□□ -1.14
NPLOC4-213ENST00000573519 TIMM17AQ99595 171 aa7.9□□□□□ -1.14
NPLOC4-213ENST00000573519 PLA2G2DQ9UNK4 145 aa7.9□□□□□ -1.14
NPLOC4-213ENST00000573519 LINC01546A6NGU7 62 aa7.89□□□□□ -1.15
NPLOC4-213ENST00000573519 NPSP0C0P6 89 aa7.89□□□□□ -1.15
NPLOC4-213ENST00000573519 C6orf48Q9UBA6 75 aa7.89□□□□□ -1.15
NPLOC4-213ENST00000573519 KIAA0087Q14695 138 aa7.88□□□□□ -1.15
NPLOC4-213ENST00000573519 GAGE2EQ4V326 116 aa7.88□□□□□ -1.15
NPLOC4-213ENST00000573519 SPINK6Q6UWN8 80 aa7.88□□□□□ -1.15
NPLOC4-213ENST00000573519 PHF5AQ7RTV0 110 aaKnown RBP7.88□□□□□ -1.15
NPLOC4-213ENST00000573519 ERASQ7Z444 233 aa7.88□□□□□ -1.15
NPLOC4-213ENST00000573519 SMCO4Q9NRQ5 59 aa7.88□□□□□ -1.15
NPLOC4-213ENST00000573519 GAGE2DQ9UEU5 116 aa7.88□□□□□ -1.15
NPLOC4-213ENST00000573519 PAPPA-AS1Q5QFB9 102 aa7.87□□□□□ -1.15
NPLOC4-213ENST00000573519 C2orf82Q6UX34 121 aa7.87□□□□□ -1.15
NPLOC4-213ENST00000573519 SLC7A5P1Q8MH63 180 aa7.87□□□□□ -1.15
NPLOC4-213ENST00000573519 TOMM7Q9P0U1 55 aa7.87□□□□□ -1.15
NPLOC4-213ENST00000573519 PRSS2P07478 247 aa7.86□□□□□ -1.15
NPLOC4-213ENST00000573519 REG3GQ6UW15 175 aa7.86□□□□□ -1.15
NPLOC4-213ENST00000573519 FAM19A5Q7Z5A7 132 aaPredicted RBP7.86□□□□□ -1.15
NPLOC4-213ENST00000573519 FAM19A3Q7Z5A8 133 aa7.86□□□□□ -1.15
NPLOC4-213ENST00000573519 C18orf32Q8TCD1 76 aa7.86□□□□□ -1.15
NPLOC4-213ENST00000573519 URB1-AS1Q96HZ7 61 aa7.86□□□□□ -1.15
NPLOC4-213ENST00000573519 PACRGQ96M98 296 aaPredicted RBP7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms