RNA–Protein interactions for RNA: ENST00000573212.5

NPLOC4-211, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-211ENST00000573212 BTF3L4Q96K17 158 aa4.86□□□□□ -1.63
NPLOC4-211ENST00000573212 C2orf48Q96LS8 159 aa4.86□□□□□ -1.63
NPLOC4-211ENST00000573212 FAM210AQ96ND0 272 aa4.86□□□□□ -1.63
NPLOC4-211ENST00000573212 TRBV20OR9-2A0A075B6H5 130 aa4.85□□□□□ -1.63
NPLOC4-211ENST00000573212 TRAV1-1A0A0B4J248 108 aa4.85□□□□□ -1.63
NPLOC4-211ENST00000573212 H0Y9J4 135 aa4.85□□□□□ -1.63
NPLOC4-211ENST00000573212 APOMO95445 188 aa4.85□□□□□ -1.63
NPLOC4-211ENST00000573212 PMCHP20382 165 aa4.85□□□□□ -1.63
NPLOC4-211ENST00000573212 POLR2KP53803 58 aaKnown RBP4.85□□□□□ -1.63
NPLOC4-211ENST00000573212 TEX261Q6UWH6 196 aa4.85□□□□□ -1.63
NPLOC4-211ENST00000573212 TMEM101Q96IK0 257 aa4.85□□□□□ -1.63
NPLOC4-211ENST00000573212 MANBALQ9NQG1 85 aa4.85□□□□□ -1.63
NPLOC4-211ENST00000573212 GNG4P50150 75 aa4.84□□□□□ -1.63
NPLOC4-211ENST00000573212 EIF5AP63241 154 aaKnown RBP4.84□□□□□ -1.63
NPLOC4-211ENST00000573212 ZNF345Q14585 488 aa4.84□□□□□ -1.63
NPLOC4-211ENST00000573212 PRR4Q16378 134 aa4.84□□□□□ -1.63
NPLOC4-211ENST00000573212 EIF5AL1Q6IS14 154 aaKnown RBP4.84□□□□□ -1.63
NPLOC4-211ENST00000573212 Q6ZVQ6 151 aa4.84□□□□□ -1.63
NPLOC4-211ENST00000573212 BIN3Q9NQY0 253 aa4.84□□□□□ -1.63
NPLOC4-211ENST00000573212 C1orf196B1AJZ1 125 aa4.83□□□□□ -1.64
NPLOC4-211ENST00000573212 BCL2L11O43521 198 aa4.83□□□□□ -1.64
NPLOC4-211ENST00000573212 CAMK2N2Q96S95 79 aa4.83□□□□□ -1.64
NPLOC4-211ENST00000573212 OPRPNQ99935 248 aaPredicted RBP4.83□□□□□ -1.64
NPLOC4-211ENST00000573212 GNG13Q9P2W3 67 aa4.83□□□□□ -1.64
NPLOC4-211ENST00000573212 CSDC2Q9Y534 153 aaKnown RBP4.83□□□□□ -1.64
NPLOC4-211ENST00000573212 KRTAP4-8A0A0G2JLE6 195 aa4.82□□□□□ -1.64
NPLOC4-211ENST00000573212 HMSDA8MTL9 139 aa4.82□□□□□ -1.64
NPLOC4-211ENST00000573212 COX7A2LO14548 114 aa4.82□□□□□ -1.64
NPLOC4-211ENST00000573212 TLX1NBP0CAT3 122 aa4.82□□□□□ -1.64
NPLOC4-211ENST00000573212 TAGLN2P37802 199 aaKnown RBP4.82□□□□□ -1.64
NPLOC4-211ENST00000573212 RIGQ13278 110 aa4.82□□□□□ -1.64
NPLOC4-211ENST00000573212 KRTAP7-1Q8IUC3 87 aa4.82□□□□□ -1.64
NPLOC4-211ENST00000573212 MRAP2Q96G30 205 aa4.82□□□□□ -1.64
NPLOC4-211ENST00000573212 RNASE7Q9H1E1 156 aaKnown RBP4.82□□□□□ -1.64
NPLOC4-211ENST00000573212 MED9Q9NWA0 146 aa4.82□□□□□ -1.64
NPLOC4-211ENST00000573212 TMEM242Q9NWH2 141 aa4.82□□□□□ -1.64
NPLOC4-211ENST00000573212 CARHSP1Q9Y2V2 147 aaKnown RBP4.82□□□□□ -1.64
NPLOC4-211ENST00000573212 TRBV27A0A0K0K1C4 114 aa4.81□□□□□ -1.64
NPLOC4-211ENST00000573212 SMLR1H3BR10 107 aa4.81□□□□□ -1.64
NPLOC4-211ENST00000573212 K7EN84 100 aa4.81□□□□□ -1.64
NPLOC4-211ENST00000573212 PDE6DO43924 150 aa4.81□□□□□ -1.64
NPLOC4-211ENST00000573212 RPL18AQ02543 176 aaKnown RBP4.81□□□□□ -1.64
NPLOC4-211ENST00000573212 LCE1DQ5T752 114 aa4.81□□□□□ -1.64
NPLOC4-211ENST00000573212 SMIM15Q7Z3B0 74 aa4.81□□□□□ -1.64
NPLOC4-211ENST00000573212 C5orf38Q86SI9 138 aa4.81□□□□□ -1.64
NPLOC4-211ENST00000573212 TSKUQ8WUA8 353 aa4.81□□□□□ -1.64
NPLOC4-211ENST00000573212 FAM218AQ96MZ4 157 aa4.81□□□□□ -1.64
NPLOC4-211ENST00000573212 RPP21Q9H633 154 aaKnown RBP4.81□□□□□ -1.64
NPLOC4-211ENST00000573212 ST20Q9HBF5 79 aa4.81□□□□□ -1.64
NPLOC4-211ENST00000573212 MRPL35Q9NZE8 188 aaKnown RBP4.81□□□□□ -1.64
NPLOC4-211ENST00000573212 FAM168BA1KXE4 195 aa4.8□□□□□ -1.64
NPLOC4-211ENST00000573212 C7orf77A4D0Y5 90 aa4.8□□□□□ -1.64
NPLOC4-211ENST00000573212 RPL13AP40429 203 aaKnown RBP4.8□□□□□ -1.64
NPLOC4-211ENST00000573212 VCX2Q9H322 139 aa4.8□□□□□ -1.64
NPLOC4-211ENST00000573212 UBE2D4Q9Y2X8 147 aa4.8□□□□□ -1.64
NPLOC4-211ENST00000573212 RAB4AP20338 218 aa4.79□□□□□ -1.64
NPLOC4-211ENST00000573212 TMEM241Q24JQ0 296 aa4.79□□□□□ -1.64
NPLOC4-211ENST00000573212 KIAA1644Q3SXP7 199 aa4.79□□□□□ -1.64
NPLOC4-211ENST00000573212 FAM104AQ969W3 186 aa4.79□□□□□ -1.64
NPLOC4-211ENST00000573212 IMMP2LQ96T52 175 aa4.79□□□□□ -1.64
NPLOC4-211ENST00000573212 TMEM191AQ9H0A3 160 aa4.79□□□□□ -1.64
NPLOC4-211ENST00000573212 TRAV13-1A0A0B4J241 112 aa4.78□□□□□ -1.64
NPLOC4-211ENST00000573212 IGHV3OR16-9A0A0B4J2B5 98 aa4.78□□□□□ -1.64
NPLOC4-211ENST00000573212 KANTRA0A1W2PQU2 76 aa4.78□□□□□ -1.64
NPLOC4-211ENST00000573212 SPAG11BQ08648 103 aa4.78□□□□□ -1.64
NPLOC4-211ENST00000573212 RNASE13Q5GAN3 156 aaKnown RBP4.78□□□□□ -1.64
NPLOC4-211ENST00000573212 FAM231DQ6ZW35 169 aa4.78□□□□□ -1.64
NPLOC4-211ENST00000573212 LINC00518Q8N0U6 118 aa4.78□□□□□ -1.64
NPLOC4-211ENST00000573212 OR10D4PQ8NGN7 298 aa4.78□□□□□ -1.64
NPLOC4-211ENST00000573212 TIMM21Q9BVV7 248 aa4.78□□□□□ -1.64
NPLOC4-211ENST00000573212 A8MWL6 223 aa4.77□□□□□ -1.65
NPLOC4-211ENST00000573212 TEX46H3BTG2 121 aa4.77□□□□□ -1.65
NPLOC4-211ENST00000573212 GATCO43716 136 aaKnown RBP4.77□□□□□ -1.65
NPLOC4-211ENST00000573212 ZNF861PO60384 105 aa4.77□□□□□ -1.65
NPLOC4-211ENST00000573212 UBE2D1P51668 147 aa4.77□□□□□ -1.65
NPLOC4-211ENST00000573212 KIAA0087Q14695 138 aa4.77□□□□□ -1.65
NPLOC4-211ENST00000573212 LCE5AQ5TCM9 118 aa4.77□□□□□ -1.65
NPLOC4-211ENST00000573212 UNQ6190/PRO20217Q6UXQ8 127 aa4.77□□□□□ -1.65
NPLOC4-211ENST00000573212 C6orf48Q9UBA6 75 aa4.77□□□□□ -1.65
NPLOC4-211ENST00000573212 SMAGPQ0VAQ4 97 aa4.76□□□□□ -1.65
NPLOC4-211ENST00000573212 Q6ZUT4 128 aa4.76□□□□□ -1.65
NPLOC4-211ENST00000573212 SMDT1Q9H4I9 107 aa4.76□□□□□ -1.65
NPLOC4-211ENST00000573212 A0A1B0GUT8 65 aa4.75□□□□□ -1.65
NPLOC4-211ENST00000573212 SMIM1B2RUZ4 78 aa4.75□□□□□ -1.65
NPLOC4-211ENST00000573212 NDUFA1O15239 70 aa4.75□□□□□ -1.65
NPLOC4-211ENST00000573212 TSPAN13O95857 204 aa4.75□□□□□ -1.65
NPLOC4-211ENST00000573212 FAM19A5Q7Z5A7 132 aaPredicted RBP4.75□□□□□ -1.65
NPLOC4-211ENST00000573212 AMN1Q8IY45 258 aa4.75□□□□□ -1.65
NPLOC4-211ENST00000573212 ORAOV1Q8WV07 137 aa4.75□□□□□ -1.65
NPLOC4-211ENST00000573212 SMKR1H3BMG3 65 aa4.74□□□□□ -1.65
NPLOC4-211ENST00000573212 M0QXV9 152 aa4.74□□□□□ -1.65
NPLOC4-211ENST00000573212 FCER1GP30273 86 aa4.74□□□□□ -1.65
NPLOC4-211ENST00000573212 C9orf129Q5T035 196 aaKnown RBP4.74□□□□□ -1.65
NPLOC4-211ENST00000573212 A0A087X002 238 aa4.73□□□□□ -1.65
NPLOC4-211ENST00000573212 HIGD1CA8MV81 97 aa4.73□□□□□ -1.65
NPLOC4-211ENST00000573212 H0Y8G0 127 aa4.73□□□□□ -1.65
NPLOC4-211ENST00000573212 PPP1R17O96001 155 aa4.73□□□□□ -1.65
NPLOC4-211ENST00000573212 RPL32P62910 135 aaKnown RBP4.73□□□□□ -1.65
NPLOC4-211ENST00000573212 UBE2BP63146 152 aa4.73□□□□□ -1.65
NPLOC4-211ENST00000573212 MRPS36P82909 103 aaKnown RBP4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms