RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 HBBP68871 147 aa3.04□□□□□ -1.92
CLK3-219ENST00000567805 COX6A2Q02221 97 aa3.04□□□□□ -1.92
CLK3-219ENST00000567805 MRPL54Q6P161 138 aaKnown RBP3.04□□□□□ -1.92
CLK3-219ENST00000567805 ATP5L2Q7Z4Y8 100 aa3.04□□□□□ -1.92
CLK3-219ENST00000567805 TMEM18Q96B42 140 aa3.04□□□□□ -1.92
CLK3-219ENST00000567805 DPH3Q96FX2 82 aa3.04□□□□□ -1.92
CLK3-219ENST00000567805 TIMM21Q9BVV7 248 aa3.04□□□□□ -1.92
CLK3-219ENST00000567805 PLAC8Q9NZF1 115 aa3.04□□□□□ -1.92
CLK3-219ENST00000567805 LINC00474Q9P2X8 69 aa3.04□□□□□ -1.92
CLK3-219ENST00000567805 UBE2D4Q9Y2X8 147 aa3.04□□□□□ -1.92
CLK3-219ENST00000567805 IGKV2-24A0A0C4DH68 120 aa3.03□□□□□ -1.92
CLK3-219ENST00000567805 D6R8Y8 96 aa3.03□□□□□ -1.92
CLK3-219ENST00000567805 COX7A2LO14548 114 aa3.03□□□□□ -1.92
CLK3-219ENST00000567805 PHOX2AO14813 284 aa3.03□□□□□ -1.92
CLK3-219ENST00000567805 PPBPP02775 128 aa3.03□□□□□ -1.92
CLK3-219ENST00000567805 RAB14P61106 215 aa3.03□□□□□ -1.92
CLK3-219ENST00000567805 PNRC1Q12796 327 aaPredicted RBP3.03□□□□□ -1.92
CLK3-219ENST00000567805 MAJINQ3KP22 176 aa3.03□□□□□ -1.92
CLK3-219ENST00000567805 ORMDL3Q8N138 153 aa3.03□□□□□ -1.92
CLK3-219ENST00000567805 PRSS3P2Q8NHM4 247 aa3.03□□□□□ -1.92
CLK3-219ENST00000567805 C7orf33Q8WU49 177 aa3.03□□□□□ -1.92
CLK3-219ENST00000567805 CARD19Q96LW7 228 aa3.03□□□□□ -1.92
CLK3-219ENST00000567805 SMIM2Q9BVW6 85 aa3.03□□□□□ -1.92
CLK3-219ENST00000567805 TNXBP22105 4242 aa3.02□□□□□ -1.93
CLK3-219ENST00000567805 A0A096LNI7 61 aa3.02□□□□□ -1.93
CLK3-219ENST00000567805 TRAV13-1A0A0B4J241 112 aa3.02□□□□□ -1.93
CLK3-219ENST00000567805 B5MCH6 92 aa3.02□□□□□ -1.93
CLK3-219ENST00000567805 APOMO95445 188 aa3.02□□□□□ -1.93
CLK3-219ENST00000567805 NPYP01303 97 aa3.02□□□□□ -1.93
CLK3-219ENST00000567805 HNRNPA3P51991 378 aaKnown RBP3.02□□□□□ -1.93
CLK3-219ENST00000567805 RPL39P62891 51 aaKnown RBP3.02□□□□□ -1.93
CLK3-219ENST00000567805 SYCNQ0VAF6 134 aa3.02□□□□□ -1.93
CLK3-219ENST00000567805 RNASE13Q5GAN3 156 aaKnown RBP3.02□□□□□ -1.93
CLK3-219ENST00000567805 SERTAD4-AS1Q5TG53 156 aa3.02□□□□□ -1.93
CLK3-219ENST00000567805 Q6ZRU5 148 aa3.02□□□□□ -1.93
CLK3-219ENST00000567805 Q6ZUT4 128 aa3.02□□□□□ -1.93
CLK3-219ENST00000567805 STPG4Q8N801 248 aa3.02□□□□□ -1.93
CLK3-219ENST00000567805 LINC00526Q96FQ7 95 aa3.02□□□□□ -1.93
CLK3-219ENST00000567805 SPANXA1Q9NS26 97 aa3.02□□□□□ -1.93
CLK3-219ENST00000567805 IGLV4-69A0A075B6H9 119 aa3.01□□□□□ -1.93
CLK3-219ENST00000567805 LOC107984640A0A0U1RRK4 108 aa3.01□□□□□ -1.93
CLK3-219ENST00000567805 ATP6V1G1O75348 118 aa3.01□□□□□ -1.93
CLK3-219ENST00000567805 MT-ND4LP03901 98 aa3.01□□□□□ -1.93
CLK3-219ENST00000567805 RAB5AP20339 215 aa3.01□□□□□ -1.93
CLK3-219ENST00000567805 MRPS36P82909 103 aaKnown RBP3.01□□□□□ -1.93
CLK3-219ENST00000567805 TMEM136Q6ZRR5 245 aa3.01□□□□□ -1.93
CLK3-219ENST00000567805 OR10D4PQ8NGN7 298 aa3.01□□□□□ -1.93
CLK3-219ENST00000567805 C2orf48Q96LS8 159 aa3.01□□□□□ -1.93
CLK3-219ENST00000567805 PRELID3AQ96N28 172 aa3.01□□□□□ -1.93
CLK3-219ENST00000567805 CAMK2N2Q96S95 79 aa3.01□□□□□ -1.93
CLK3-219ENST00000567805 LAMTOR2Q9Y2Q5 125 aa3.01□□□□□ -1.93
CLK3-219ENST00000567805 IGHV3OR16-9A0A0B4J2B5 98 aa3□□□□□ -1.93
CLK3-219ENST00000567805 IFITM10A6NMD0 228 aa3□□□□□ -1.93
CLK3-219ENST00000567805 F8WDY8 70 aa3□□□□□ -1.93
CLK3-219ENST00000567805 S100A1P23297 94 aa3□□□□□ -1.93
CLK3-219ENST00000567805 IFI27P40305 119 aaPredicted RBP3□□□□□ -1.93
CLK3-219ENST00000567805 PRR3P79522 188 aaKnown RBP3□□□□□ -1.93
CLK3-219ENST00000567805 SPAG11BQ08648 103 aa3□□□□□ -1.93
CLK3-219ENST00000567805 NDUFA5Q16718 116 aa3□□□□□ -1.93
CLK3-219ENST00000567805 CLLU1Q5K131 121 aa3□□□□□ -1.93
CLK3-219ENST00000567805 C5orf38Q86SI9 138 aa3□□□□□ -1.93
CLK3-219ENST00000567805 FAM104AQ969W3 186 aa3□□□□□ -1.93
CLK3-219ENST00000567805 MAP1LC3AQ9H492 121 aa3□□□□□ -1.93
CLK3-219ENST00000567805 PYGO1Q9Y3Y4 419 aa3□□□□□ -1.93
CLK3-219ENST00000567805 IGLV4-3A0A075B6K6 122 aa2.99□□□□□ -1.93
CLK3-219ENST00000567805 TGIF2-C20orf24A0A0A6YYL0 155 aa2.99□□□□□ -1.93
CLK3-219ENST00000567805 LOC389332A0A1B0GUA5 103 aa2.99□□□□□ -1.93
CLK3-219ENST00000567805 C9orf118A6NHY6 69 aa2.99□□□□□ -1.93
CLK3-219ENST00000567805 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.99□□□□□ -1.93
CLK3-219ENST00000567805 K7EMI3 77 aa2.99□□□□□ -1.93
CLK3-219ENST00000567805 NDUFA1O15239 70 aa2.99□□□□□ -1.93
CLK3-219ENST00000567805 GAGE2BQ13066 116 aa2.99□□□□□ -1.93
CLK3-219ENST00000567805 ORMDL2Q53FV1 153 aa2.99□□□□□ -1.93
CLK3-219ENST00000567805 UQCC3Q6UW78 93 aa2.99□□□□□ -1.93
CLK3-219ENST00000567805 Q8N8P6 123 aa2.99□□□□□ -1.93
CLK3-219ENST00000567805 ORAOV1Q8WV07 137 aa2.99□□□□□ -1.93
CLK3-219ENST00000567805 TMEM141Q96I45 108 aa2.99□□□□□ -1.93
CLK3-219ENST00000567805 IMMP2LQ96T52 175 aa2.99□□□□□ -1.93
CLK3-219ENST00000567805 OPRPNQ99935 248 aaPredicted RBP2.99□□□□□ -1.93
CLK3-219ENST00000567805 MRPL35Q9NZE8 188 aaKnown RBP2.99□□□□□ -1.93
CLK3-219ENST00000567805 TRAV9-1A0A075B6T8 112 aa2.98□□□□□ -1.93
CLK3-219ENST00000567805 A0A087WZ39 114 aa2.98□□□□□ -1.93
CLK3-219ENST00000567805 NPSP0C0P6 89 aa2.98□□□□□ -1.93
CLK3-219ENST00000567805 TLX1NBP0CAT3 122 aa2.98□□□□□ -1.93
CLK3-219ENST00000567805 MT1HL1P0DM35 61 aa2.98□□□□□ -1.93
CLK3-219ENST00000567805 G0S2P27469 103 aa2.98□□□□□ -1.93
CLK3-219ENST00000567805 RPL18AQ02543 176 aaKnown RBP2.98□□□□□ -1.93
CLK3-219ENST00000567805 SPINK6Q6UWN8 80 aa2.98□□□□□ -1.93
CLK3-219ENST00000567805 C2orf66Q6UXQ4 117 aa2.98□□□□□ -1.93
CLK3-219ENST00000567805 Q6ZN92 141 aa2.98□□□□□ -1.93
CLK3-219ENST00000567805 TEX43Q6ZNM6 134 aa2.98□□□□□ -1.93
CLK3-219ENST00000567805 Q6ZRP5 223 aa2.98□□□□□ -1.93
CLK3-219ENST00000567805 C2orf88Q9BSF0 95 aa2.98□□□□□ -1.93
CLK3-219ENST00000567805 CTDSP1Q9GZU7 261 aa2.98□□□□□ -1.93
CLK3-219ENST00000567805 NXT2Q9NPJ8 142 aaKnown RBP2.98□□□□□ -1.93
CLK3-219ENST00000567805 CYSLTR1Q9Y271 337 aa2.98□□□□□ -1.93
CLK3-219ENST00000567805 HMCN2Q8NDA2 5059 aa2.97□□□□□ -1.93
CLK3-219ENST00000567805 A0A0J9YXV3 536 aa2.97□□□□□ -1.93
CLK3-219ENST00000567805 A0A1W2PNN7 141 aa2.97□□□□□ -1.93
CLK3-219ENST00000567805 TMEM218A2RU14 115 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms