RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 TMEM136Q6ZRR5 245 aa5.57□□□□□ -1.52
SNRPA1-206ENST00000558059 Q6ZUT4 128 aa5.57□□□□□ -1.52
SNRPA1-206ENST00000558059 PRSS3P2Q8NHM4 247 aa5.57□□□□□ -1.52
SNRPA1-206ENST00000558059 SPACA4Q8TDM5 124 aa5.57□□□□□ -1.52
SNRPA1-206ENST00000558059 ANAPC16Q96DE5 110 aa5.57□□□□□ -1.52
SNRPA1-206ENST00000558059 TRAV13-1A0A0B4J241 112 aa5.56□□□□□ -1.52
SNRPA1-206ENST00000558059 HNRNPA3P51991 378 aaKnown RBP5.56□□□□□ -1.52
SNRPA1-206ENST00000558059 ORMDL3Q8N138 153 aa5.56□□□□□ -1.52
SNRPA1-206ENST00000558059 TMEM18Q96B42 140 aa5.56□□□□□ -1.52
SNRPA1-206ENST00000558059 DPH3Q96FX2 82 aa5.56□□□□□ -1.52
SNRPA1-206ENST00000558059 PRELID3AQ96N28 172 aa5.56□□□□□ -1.52
SNRPA1-206ENST00000558059 PRSS47A8MTI9 375 aa5.55□□□□□ -1.52
SNRPA1-206ENST00000558059 OPRPNQ99935 248 aaPredicted RBP5.55□□□□□ -1.52
SNRPA1-206ENST00000558059 PLAC8Q9NZF1 115 aa5.55□□□□□ -1.52
SNRPA1-206ENST00000558059 A0A096LNI7 61 aa5.54□□□□□ -1.52
SNRPA1-206ENST00000558059 IGKV2-24A0A0C4DH68 120 aa5.54□□□□□ -1.52
SNRPA1-206ENST00000558059 ZNF561-AS1K7EIQ3 104 aa5.54□□□□□ -1.52
SNRPA1-206ENST00000558059 COX7A2LO14548 114 aa5.54□□□□□ -1.52
SNRPA1-206ENST00000558059 ADCYAP1P18509 176 aa5.54□□□□□ -1.52
SNRPA1-206ENST00000558059 MRPS36P82909 103 aaKnown RBP5.54□□□□□ -1.52
SNRPA1-206ENST00000558059 SYCNQ0VAF6 134 aa5.54□□□□□ -1.52
SNRPA1-206ENST00000558059 MAJINQ3KP22 176 aa5.54□□□□□ -1.52
SNRPA1-206ENST00000558059 C5orf38Q86SI9 138 aa5.54□□□□□ -1.52
SNRPA1-206ENST00000558059 CARD19Q96LW7 228 aa5.54□□□□□ -1.52
SNRPA1-206ENST00000558059 SPANXA1Q9NS26 97 aa5.54□□□□□ -1.52
SNRPA1-206ENST00000558059 IGLV4-69A0A075B6H9 119 aa5.53□□□□□ -1.52
SNRPA1-206ENST00000558059 TMEM218A2RU14 115 aa5.53□□□□□ -1.52
SNRPA1-206ENST00000558059 MALP21145 153 aa5.53□□□□□ -1.52
SNRPA1-206ENST00000558059 UQCC3Q6UW78 93 aa5.53□□□□□ -1.52
SNRPA1-206ENST00000558059 LAMTOR2Q9Y2Q5 125 aa5.53□□□□□ -1.52
SNRPA1-206ENST00000558059 IGHV3OR16-9A0A0B4J2B5 98 aa5.52□□□□□ -1.53
SNRPA1-206ENST00000558059 LOC389332A0A1B0GUA5 103 aa5.52□□□□□ -1.53
SNRPA1-206ENST00000558059 OXTP01178 125 aa5.52□□□□□ -1.53
SNRPA1-206ENST00000558059 RAB5AP20339 215 aa5.52□□□□□ -1.53
SNRPA1-206ENST00000558059 Q6ZRU5 148 aa5.52□□□□□ -1.53
SNRPA1-206ENST00000558059 STPG4Q8N801 248 aa5.52□□□□□ -1.53
SNRPA1-206ENST00000558059 Q8N8P6 123 aa5.52□□□□□ -1.53
SNRPA1-206ENST00000558059 IMMP2LQ96T52 175 aa5.52□□□□□ -1.53
SNRPA1-206ENST00000558059 MAP1LC3AQ9H492 121 aa5.52□□□□□ -1.53
SNRPA1-206ENST00000558059 PYGO1Q9Y3Y4 419 aa5.52□□□□□ -1.53
SNRPA1-206ENST00000558059 TNXBP22105 4242 aa5.52□□□□□ -1.53
SNRPA1-206ENST00000558059 IGLV4-3A0A075B6K6 122 aa5.51□□□□□ -1.53
SNRPA1-206ENST00000558059 C2orf48Q96LS8 159 aa5.51□□□□□ -1.53
SNRPA1-206ENST00000558059 LINC00474Q9P2X8 69 aa5.51□□□□□ -1.53
SNRPA1-206ENST00000558059 IFITM10A6NMD0 228 aa5.5□□□□□ -1.53
SNRPA1-206ENST00000558059 APOMO95445 188 aa5.5□□□□□ -1.53
SNRPA1-206ENST00000558059 IFI27P40305 119 aaPredicted RBP5.5□□□□□ -1.53
SNRPA1-206ENST00000558059 PTTG1IPP53801 180 aa5.5□□□□□ -1.53
SNRPA1-206ENST00000558059 CAMK2N2Q96S95 79 aa5.5□□□□□ -1.53
SNRPA1-206ENST00000558059 SEC11CQ9BY50 192 aa5.5□□□□□ -1.53
SNRPA1-206ENST00000558059 CTDSP1Q9GZU7 261 aa5.5□□□□□ -1.53
SNRPA1-206ENST00000558059 PKIGQ9Y2B9 76 aa5.5□□□□□ -1.53
SNRPA1-206ENST00000558059 TRAV9-1A0A075B6T8 112 aa5.49□□□□□ -1.53
SNRPA1-206ENST00000558059 LOC107984640A0A0U1RRK4 108 aa5.49□□□□□ -1.53
SNRPA1-206ENST00000558059 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.49□□□□□ -1.53
SNRPA1-206ENST00000558059 SPAG11BQ08648 103 aa5.49□□□□□ -1.53
SNRPA1-206ENST00000558059 GAGE2BQ13066 116 aa5.49□□□□□ -1.53
SNRPA1-206ENST00000558059 RNF151Q2KHN1 245 aa5.49□□□□□ -1.53
SNRPA1-206ENST00000558059 LINC00242Q5T6M2 205 aa5.49□□□□□ -1.53
SNRPA1-206ENST00000558059 ZC2HC1BQ5TFG8 222 aa5.49□□□□□ -1.53
SNRPA1-206ENST00000558059 KRTAP5-3Q6L8H2 238 aa5.49□□□□□ -1.53
SNRPA1-206ENST00000558059 OR10D4PQ8NGN7 298 aa5.49□□□□□ -1.53
SNRPA1-206ENST00000558059 C7orf33Q8WU49 177 aa5.49□□□□□ -1.53
SNRPA1-206ENST00000558059 TMEM141Q96I45 108 aa5.49□□□□□ -1.53
SNRPA1-206ENST00000558059 A0A087WZ39 114 aa5.48□□□□□ -1.53
SNRPA1-206ENST00000558059 A0A0J9YXV3 536 aa5.48□□□□□ -1.53
SNRPA1-206ENST00000558059 IGIPA6NJ69 53 aa5.48□□□□□ -1.53
SNRPA1-206ENST00000558059 K7EMI3 77 aa5.48□□□□□ -1.53
SNRPA1-206ENST00000558059 KIAA1644Q3SXP7 199 aa5.48□□□□□ -1.53
SNRPA1-206ENST00000558059 ORMDL2Q53FV1 153 aa5.48□□□□□ -1.53
SNRPA1-206ENST00000558059 C10orf91Q5T1B1 145 aa5.48□□□□□ -1.53
SNRPA1-206ENST00000558059 C2orf66Q6UXQ4 117 aa5.48□□□□□ -1.53
SNRPA1-206ENST00000558059 LINC00173Q6ZV60 143 aa5.48□□□□□ -1.53
SNRPA1-206ENST00000558059 COMMD7Q86VX2 200 aa5.48□□□□□ -1.53
SNRPA1-206ENST00000558059 ORAOV1Q8WV07 137 aa5.48□□□□□ -1.53
SNRPA1-206ENST00000558059 AMELXQ99217 191 aa5.48□□□□□ -1.53
SNRPA1-206ENST00000558059 CYSLTR1Q9Y271 337 aa5.48□□□□□ -1.53
SNRPA1-206ENST00000558059 TGIF2-C20orf24A0A0A6YYL0 155 aa5.47□□□□□ -1.53
SNRPA1-206ENST00000558059 A0A1W2PNN7 141 aa5.47□□□□□ -1.53
SNRPA1-206ENST00000558059 F8WDY8 70 aa5.47□□□□□ -1.53
SNRPA1-206ENST00000558059 UBE2D1P51668 147 aa5.47□□□□□ -1.53
SNRPA1-206ENST00000558059 PRR3P79522 188 aaKnown RBP5.47□□□□□ -1.53
SNRPA1-206ENST00000558059 KIAA0087Q14695 138 aa5.47□□□□□ -1.53
SNRPA1-206ENST00000558059 C10orf25Q5T742 122 aa5.47□□□□□ -1.53
SNRPA1-206ENST00000558059 TEX43Q6ZNM6 134 aa5.47□□□□□ -1.53
SNRPA1-206ENST00000558059 NXT2Q9NPJ8 142 aaKnown RBP5.47□□□□□ -1.53
SNRPA1-206ENST00000558059 MRPL35Q9NZE8 188 aaKnown RBP5.47□□□□□ -1.53
SNRPA1-206ENST00000558059 NDUFA1O15239 70 aa5.46□□□□□ -1.54
SNRPA1-206ENST00000558059 NPSP0C0P6 89 aa5.46□□□□□ -1.54
SNRPA1-206ENST00000558059 MT1HL1P0DM35 61 aa5.46□□□□□ -1.54
SNRPA1-206ENST00000558059 UNQ6190/PRO20217Q6UXQ8 127 aa5.46□□□□□ -1.54
SNRPA1-206ENST00000558059 GNB1LQ9BYB4 327 aa5.46□□□□□ -1.54
SNRPA1-206ENST00000558059 VCX2Q9H322 139 aa5.46□□□□□ -1.54
SNRPA1-206ENST00000558059 TLX1NBP0CAT3 122 aa5.45□□□□□ -1.54
SNRPA1-206ENST00000558059 S100PP25815 95 aa5.45□□□□□ -1.54
SNRPA1-206ENST00000558059 RPL18AQ02543 176 aaKnown RBP5.45□□□□□ -1.54
SNRPA1-206ENST00000558059 C9orf116Q5BN46 136 aaPredicted RBP5.45□□□□□ -1.54
SNRPA1-206ENST00000558059 Q6ZN92 141 aa5.45□□□□□ -1.54
SNRPA1-206ENST00000558059 FAM19A3Q7Z5A8 133 aa5.45□□□□□ -1.54
SNRPA1-206ENST00000558059 LINC01561Q8N1V8 128 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 135.8 ms