RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 MRPS36P82909 103 aaKnown RBP13.05□□□□□ -0.32
VTI1B-205ENST00000555543 PRSS3P2Q8NHM4 247 aa13.05□□□□□ -0.32
VTI1B-205ENST00000555543 GNB1LQ9BYB4 327 aa13.05□□□□□ -0.32
VTI1B-205ENST00000555543 PKHD1L1Q86WI1 4243 aa13.05□□□□□ -0.32
VTI1B-205ENST00000555543 Q8N8P6 123 aa13.04□□□□□ -0.32
VTI1B-205ENST00000555543 MT-ND6P03923 174 aa13.03□□□□□ -0.32
VTI1B-205ENST00000555543 C5orf38Q86SI9 138 aa13.03□□□□□ -0.32
VTI1B-205ENST00000555543 TRAPPC1Q9Y5R8 145 aa13.03□□□□□ -0.32
VTI1B-205ENST00000555543 A0A087WYN8 130 aa13.02□□□□□ -0.33
VTI1B-205ENST00000555543 TRGC2P03986 189 aa13.02□□□□□ -0.33
VTI1B-205ENST00000555543 MALP21145 153 aa13.02□□□□□ -0.33
VTI1B-205ENST00000555543 CARD19Q96LW7 228 aa13.02□□□□□ -0.33
VTI1B-205ENST00000555543 IGLV4-3A0A075B6K6 122 aa13.01□□□□□ -0.33
VTI1B-205ENST00000555543 IFITM10A6NMD0 228 aa13.01□□□□□ -0.33
VTI1B-205ENST00000555543 ZNF561-AS1K7EIQ3 104 aa13.01□□□□□ -0.33
VTI1B-205ENST00000555543 IFI27P40305 119 aaPredicted RBP13.01□□□□□ -0.33
VTI1B-205ENST00000555543 KIAA1644Q3SXP7 199 aa13.01□□□□□ -0.33
VTI1B-205ENST00000555543 PYGO1Q9Y3Y4 419 aa13.01□□□□□ -0.33
VTI1B-205ENST00000555543 IGLV4-69A0A075B6H9 119 aa13□□□□□ -0.33
VTI1B-205ENST00000555543 IGKV2-24A0A0C4DH68 120 aa13□□□□□ -0.33
VTI1B-205ENST00000555543 TMA7Q9Y2S6 64 aaKnown RBP13□□□□□ -0.33
VTI1B-205ENST00000555543 A0A096LNI7 61 aa12.99□□□□□ -0.33
VTI1B-205ENST00000555543 RAB5BP61020 215 aa12.99□□□□□ -0.33
VTI1B-205ENST00000555543 RPL37AP61513 92 aaKnown RBP12.99□□□□□ -0.33
VTI1B-205ENST00000555543 SYCNQ0VAF6 134 aa12.99□□□□□ -0.33
VTI1B-205ENST00000555543 FABP9Q0Z7S8 132 aa12.99□□□□□ -0.33
VTI1B-205ENST00000555543 DPH3Q96FX2 82 aa12.99□□□□□ -0.33
VTI1B-205ENST00000555543 MRPL18Q9H0U6 180 aaKnown RBP12.99□□□□□ -0.33
VTI1B-205ENST00000555543 LRP1Q07954 4544 aaKnown RBP12.98□□□□□ -0.33
VTI1B-205ENST00000555543 IGHV3OR16-9A0A0B4J2B5 98 aa12.98□□□□□ -0.33
VTI1B-205ENST00000555543 C2orf66Q6UXQ4 117 aa12.98□□□□□ -0.33
VTI1B-205ENST00000555543 PLAC8Q9NZF1 115 aa12.98□□□□□ -0.33
VTI1B-205ENST00000555543 CYSLTR1Q9Y271 337 aa12.98□□□□□ -0.33
VTI1B-205ENST00000555543 MAJINQ3KP22 176 aa12.97□□□□□ -0.33
VTI1B-205ENST00000555543 Q6ZRU5 148 aa12.97□□□□□ -0.33
VTI1B-205ENST00000555543 TMEM141Q96I45 108 aa12.97□□□□□ -0.33
VTI1B-205ENST00000555543 NXT2Q9NPJ8 142 aaKnown RBP12.97□□□□□ -0.33
VTI1B-205ENST00000555543 FAT3Q8TDW7 4589 aa12.97□□□□□ -0.33
VTI1B-205ENST00000555543 ORMDL2Q53FV1 153 aa12.96□□□□□ -0.33
VTI1B-205ENST00000555543 HNRNPA3P51991 378 aaKnown RBP12.95□□□□□ -0.34
VTI1B-205ENST00000555543 SPAG11BQ08648 103 aa12.95□□□□□ -0.34
VTI1B-205ENST00000555543 ZC2HC1BQ5TFG8 222 aa12.95□□□□□ -0.34
VTI1B-205ENST00000555543 K7EMI3 77 aa12.94□□□□□ -0.34
VTI1B-205ENST00000555543 APOMO95445 188 aa12.94□□□□□ -0.34
VTI1B-205ENST00000555543 LINC00242Q5T6M2 205 aa12.94□□□□□ -0.34
VTI1B-205ENST00000555543 LINC00173Q6ZV60 143 aa12.94□□□□□ -0.34
VTI1B-205ENST00000555543 CAMK2N2Q96S95 79 aa12.94□□□□□ -0.34
VTI1B-205ENST00000555543 TEX43Q6ZNM6 134 aa12.93□□□□□ -0.34
VTI1B-205ENST00000555543 STPG4Q8N801 248 aa12.93□□□□□ -0.34
VTI1B-205ENST00000555543 OR10D4PQ8NGN7 298 aa12.93□□□□□ -0.34
VTI1B-205ENST00000555543 ORAOV1Q8WV07 137 aa12.93□□□□□ -0.34
VTI1B-205ENST00000555543 C2orf48Q96LS8 159 aa12.93□□□□□ -0.34
VTI1B-205ENST00000555543 IGIPA6NJ69 53 aa12.92□□□□□ -0.34
VTI1B-205ENST00000555543 HIST1H2BKO60814 126 aa12.92□□□□□ -0.34
VTI1B-205ENST00000555543 HIST1H2BJP06899 126 aa12.92□□□□□ -0.34
VTI1B-205ENST00000555543 HIST1H2BOP23527 126 aa12.92□□□□□ -0.34
VTI1B-205ENST00000555543 HIST1H2BBP33778 126 aa12.92□□□□□ -0.34
VTI1B-205ENST00000555543 UBE2D1P51668 147 aa12.92□□□□□ -0.34
VTI1B-205ENST00000555543 HIST1H2BDP58876 126 aa12.92□□□□□ -0.34
VTI1B-205ENST00000555543 HIST1H2BCP62807 126 aa12.92□□□□□ -0.34
VTI1B-205ENST00000555543 HIST2H2BEQ16778 126 aa12.92□□□□□ -0.34
VTI1B-205ENST00000555543 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.92□□□□□ -0.34
VTI1B-205ENST00000555543 HIST1H2BHQ93079 126 aa12.92□□□□□ -0.34
VTI1B-205ENST00000555543 HIST1H2BNQ99877 126 aa12.92□□□□□ -0.34
VTI1B-205ENST00000555543 HIST1H2BMQ99879 126 aa12.92□□□□□ -0.34
VTI1B-205ENST00000555543 ALKBH7Q9BT30 221 aaPredicted RBP12.92□□□□□ -0.34
VTI1B-205ENST00000555543 AMELXQ99217 191 aa12.91□□□□□ -0.34
VTI1B-205ENST00000555543 PKIGQ9Y2B9 76 aa12.9□□□□□ -0.34
VTI1B-205ENST00000555543 A0A087WZ39 114 aa12.89□□□□□ -0.35
VTI1B-205ENST00000555543 LOC107984640A0A0U1RRK4 108 aa12.89□□□□□ -0.35
VTI1B-205ENST00000555543 PTTG1IPP53801 180 aa12.89□□□□□ -0.35
VTI1B-205ENST00000555543 Q6ZN92 141 aa12.89□□□□□ -0.35
VTI1B-205ENST00000555543 LINC00474Q9P2X8 69 aa12.89□□□□□ -0.35
VTI1B-205ENST00000555543 A0A0J9YXV3 536 aa12.88□□□□□ -0.35
VTI1B-205ENST00000555543 KRTAP29-1A8MX34 341 aaPredicted RBP12.88□□□□□ -0.35
VTI1B-205ENST00000555543 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.88□□□□□ -0.35
VTI1B-205ENST00000555543 NPSP0C0P6 89 aa12.88□□□□□ -0.35
VTI1B-205ENST00000555543 TOMM6Q96B49 74 aa12.88□□□□□ -0.35
VTI1B-205ENST00000555543 C2orf88Q9BSF0 95 aa12.88□□□□□ -0.35
VTI1B-205ENST00000555543 VCX2Q9H322 139 aa12.88□□□□□ -0.35
VTI1B-205ENST00000555543 GAGE2BQ13066 116 aa12.87□□□□□ -0.35
VTI1B-205ENST00000555543 C10orf25Q5T742 122 aa12.87□□□□□ -0.35
VTI1B-205ENST00000555543 LINC01546A6NGU7 62 aa12.86□□□□□ -0.35
VTI1B-205ENST00000555543 TIMM17AQ99595 171 aa12.86□□□□□ -0.35
VTI1B-205ENST00000555543 J3QL48 77 aa12.85□□□□□ -0.35
VTI1B-205ENST00000555543 S100A6P06703 90 aa12.85□□□□□ -0.35
VTI1B-205ENST00000555543 NDUFA6P56556 154 aa12.85□□□□□ -0.35
VTI1B-205ENST00000555543 KIAA0087Q14695 138 aa12.85□□□□□ -0.35
VTI1B-205ENST00000555543 C7orf33Q8WU49 177 aa12.85□□□□□ -0.35
VTI1B-205ENST00000555543 MRPL35Q9NZE8 188 aaKnown RBP12.85□□□□□ -0.35
VTI1B-205ENST00000555543 NDUFA1O15239 70 aa12.84□□□□□ -0.35
VTI1B-205ENST00000555543 RPL18AQ02543 176 aaKnown RBP12.84□□□□□ -0.35
VTI1B-205ENST00000555543 RNF151Q2KHN1 245 aa12.84□□□□□ -0.35
VTI1B-205ENST00000555543 COA6Q5JTJ3 125 aaKnown RBP12.84□□□□□ -0.35
VTI1B-205ENST00000555543 UNQ6190/PRO20217Q6UXQ8 127 aa12.84□□□□□ -0.35
VTI1B-205ENST00000555543 FAM19A3Q7Z5A8 133 aa12.84□□□□□ -0.35
VTI1B-205ENST00000555543 G0S2P27469 103 aa12.83□□□□□ -0.36
VTI1B-205ENST00000555543 F8WDY8 70 aa12.82□□□□□ -0.36
VTI1B-205ENST00000555543 ERASQ7Z444 233 aa12.82□□□□□ -0.36
VTI1B-205ENST00000555543 SCGB3A1Q96QR1 104 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms