RNA–Protein interactions for RNA: ENST00000554707.1

PCNX1-208, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-208ENST00000554707 GNG7O60262 68 aa-1.05□□□□□ -2.58
PCNX1-208ENST00000554707 PI4KAP42356 2102 aa-1.05□□□□□ -2.58
PCNX1-208ENST00000554707 C10orf113Q5VZT2 155 aa-1.05□□□□□ -2.58
PCNX1-208ENST00000554707 TMEM263Q8WUH6 116 aaKnown RBP-1.05□□□□□ -2.58
PCNX1-208ENST00000554707 SNRNP25Q9BV90 132 aaKnown RBP-1.05□□□□□ -2.58
PCNX1-208ENST00000554707 NAA60Q9H7X0 242 aa-1.05□□□□□ -2.58
PCNX1-208ENST00000554707 LAMA2P24043 3122 aaKnown RBP-1.05□□□□□ -2.58
PCNX1-208ENST00000554707 ARHGEF12Q9NZN5 1544 aa-1.05□□□□□ -2.58
PCNX1-208ENST00000554707 IGLC1P0CG04 106 aa-1.06□□□□□ -2.58
PCNX1-208ENST00000554707 CATR1Q13166 79 aa-1.06□□□□□ -2.58
PCNX1-208ENST00000554707 SPANXDQ9BXN6 97 aa-1.06□□□□□ -2.58
PCNX1-208ENST00000554707 APLNQ9ULZ1 77 aa-1.06□□□□□ -2.58
PCNX1-208ENST00000554707 DOCK1Q14185 1865 aa-1.06□□□□□ -2.58
PCNX1-208ENST00000554707 NSD3Q9BZ95 1437 aa-1.06□□□□□ -2.58
PCNX1-208ENST00000554707 SVEP1Q4LDE5 3571 aa-1.07□□□□□ -2.58
PCNX1-208ENST00000554707 LINC00959A0A1B0GUT2 108 aa-1.07□□□□□ -2.58
PCNX1-208ENST00000554707 Q56UQ5 140 aa-1.07□□□□□ -2.58
PCNX1-208ENST00000554707 ARL11Q969Q4 196 aa-1.07□□□□□ -2.58
PCNX1-208ENST00000554707 FLGP20930 4061 aaPredicted RBP-1.07□□□□□ -2.58
PCNX1-208ENST00000554707 CEP152O94986 1710 aa-1.07□□□□□ -2.58
PCNX1-208ENST00000554707 IQSEC2Q5JU85 1478 aa-1.07□□□□□ -2.58
PCNX1-208ENST00000554707 URB1O60287 2271 aaKnown RBP-1.08□□□□□ -2.58
PCNX1-208ENST00000554707 GOLGA4Q13439 2230 aaKnown RBP-1.08□□□□□ -2.58
PCNX1-208ENST00000554707 NXT2Q9NPJ8 142 aaKnown RBP-1.08□□□□□ -2.58
PCNX1-208ENST00000554707 LINC00474Q9P2X8 69 aa-1.08□□□□□ -2.58
PCNX1-208ENST00000554707 ARL2-SNX15V9GYD0 113 aa-1.08□□□□□ -2.58
PCNX1-208ENST00000554707 CPSF1Q10570 1443 aaKnown RBP-1.08□□□□□ -2.58
PCNX1-208ENST00000554707 RIMS1Q86UR5 1692 aaKnown RBP-1.09□□□□□ -2.58
PCNX1-208ENST00000554707 SBF2Q86WG5 1849 aa-1.09□□□□□ -2.58
PCNX1-208ENST00000554707 APOC2P02655 101 aa-1.09□□□□□ -2.58
PCNX1-208ENST00000554707 COX8AP10176 69 aa-1.09□□□□□ -2.58
PCNX1-208ENST00000554707 SELENOWP63302 87 aa-1.09□□□□□ -2.58
PCNX1-208ENST00000554707 MYOZ3Q8TDC0 251 aa-1.09□□□□□ -2.58
PCNX1-208ENST00000554707 LINC00470Q9BZP3 86 aa-1.09□□□□□ -2.58
PCNX1-208ENST00000554707 IFNGP01579 166 aa-1.1□□□□□ -2.59
PCNX1-208ENST00000554707 KRTAP6-2Q3LI66 62 aa-1.1□□□□□ -2.59
PCNX1-208ENST00000554707 FAM223AQ8IWN6 122 aa-1.1□□□□□ -2.59
PCNX1-208ENST00000554707 C8orf59Q8N0T1 100 aaPredicted RBP-1.1□□□□□ -2.59
PCNX1-208ENST00000554707 LINC01600Q96MT4 127 aa-1.1□□□□□ -2.59
PCNX1-208ENST00000554707 UQCR10Q9UDW1 63 aa-1.1□□□□□ -2.59
PCNX1-208ENST00000554707 PAIP2BQ9ULR5 123 aaKnown RBP-1.1□□□□□ -2.59
PCNX1-208ENST00000554707 PATJQ8NI35 1801 aa-1.1□□□□□ -2.59
PCNX1-208ENST00000554707 HECTD1Q9ULT8 2610 aa-1.11□□□□□ -2.59
PCNX1-208ENST00000554707 CPSF4LA6NMK7 179 aaKnown RBP-1.11□□□□□ -2.59
PCNX1-208ENST00000554707 SSSCA1O60232 199 aa-1.11□□□□□ -2.59
PCNX1-208ENST00000554707 COMMD6Q7Z4G1 85 aa-1.11□□□□□ -2.59
PCNX1-208ENST00000554707 C5orf38Q86SI9 138 aa-1.11□□□□□ -2.59
PCNX1-208ENST00000554707 USMG5Q96IX5 58 aa-1.11□□□□□ -2.59
PCNX1-208ENST00000554707 ITPR3Q14573 2671 aa-1.12□□□□□ -2.59
PCNX1-208ENST00000554707 MXRA5Q9NR99 2828 aa-1.12□□□□□ -2.59
PCNX1-208ENST00000554707 WHAMMP3Q1A5X7 153 aa-1.12□□□□□ -2.59
PCNX1-208ENST00000554707 DEFB135Q30KP9 77 aa-1.12□□□□□ -2.59
PCNX1-208ENST00000554707 SPRR4Q96PI1 79 aa-1.12□□□□□ -2.59
PCNX1-208ENST00000554707 USP9YO00507 2555 aaPredicted RBP-1.12□□□□□ -2.59
PCNX1-208ENST00000554707 BICRAQ9NZM4 1560 aa-1.13□□□□□ -2.59
PCNX1-208ENST00000554707 SPRR2AP35326 72 aa-1.13□□□□□ -2.59
PCNX1-208ENST00000554707 SFTA2Q6UW10 78 aa-1.13□□□□□ -2.59
PCNX1-208ENST00000554707 ZNF436-AS1Q8NC38 126 aaPredicted RBP-1.13□□□□□ -2.59
PCNX1-208ENST00000554707 LCN9Q8WX39 176 aa-1.13□□□□□ -2.59
PCNX1-208ENST00000554707 HMGXB3Q12766 1538 aa-1.14□□□□□ -2.59
PCNX1-208ENST00000554707 TULP4Q9NRJ4 1543 aa-1.14□□□□□ -2.59
PCNX1-208ENST00000554707 DOCK2Q92608 1830 aa-1.14□□□□□ -2.59
PCNX1-208ENST00000554707 TGP01266 2768 aa-1.14□□□□□ -2.59
PCNX1-208ENST00000554707 CCDC58Q4VC31 144 aa-1.14□□□□□ -2.59
PCNX1-208ENST00000554707 PRKDCP78527 4128 aaKnown RBP-1.14□□□□□ -2.59
PCNX1-208ENST00000554707 EPG5Q9HCE0 2579 aa-1.14□□□□□ -2.59
PCNX1-208ENST00000554707 RAPGEF6Q8TEU7 1601 aa-1.15□□□□□ -2.59
PCNX1-208ENST00000554707 KDM5AP29375 1690 aaKnown RBP-1.15□□□□□ -2.59
PCNX1-208ENST00000554707 SETBP1Q9Y6X0 1596 aa-1.15□□□□□ -2.59
PCNX1-208ENST00000554707 LOC100130705A0A1B0GUX0 176 aa-1.15□□□□□ -2.59
PCNX1-208ENST00000554707 PRO1933Q9H354 126 aa-1.15□□□□□ -2.59
PCNX1-208ENST00000554707 CDC42SE2Q9NRR3 84 aa-1.15□□□□□ -2.59
PCNX1-208ENST00000554707 NBPF19A0A087WUL8 3843 aa-1.15□□□□□ -2.59
PCNX1-208ENST00000554707 DNAJC13O75165 2243 aa-1.16□□□□□ -2.59
PCNX1-208ENST00000554707 PKHD1P08F94 4074 aa-1.16□□□□□ -2.59
PCNX1-208ENST00000554707 OOSP1A8MZH6 123 aa-1.16□□□□□ -2.6
PCNX1-208ENST00000554707 GNG11P61952 73 aa-1.16□□□□□ -2.6
PCNX1-208ENST00000554707 MANBALQ9NQG1 85 aa-1.16□□□□□ -2.6
PCNX1-208ENST00000554707 DSPP15924 2871 aaKnown RBP-1.16□□□□□ -2.6
PCNX1-208ENST00000554707 MAGI1Q96QZ7 1491 aaPredicted RBP-1.17□□□□□ -2.6
PCNX1-208ENST00000554707 PCNX1Q96RV3 2341 aa-1.17□□□□□ -2.6
PCNX1-208ENST00000554707 A0A1B0GWA3 101 aa-1.17□□□□□ -2.6
PCNX1-208ENST00000554707 BTG2P78543 158 aa-1.17□□□□□ -2.6
PCNX1-208ENST00000554707 FAM167A-AS1Q96KT0 104 aa-1.17□□□□□ -2.6
PCNX1-208ENST00000554707 NAIPQ13075 1403 aa-1.17□□□□□ -2.6
PCNX1-208ENST00000554707 SEC11AP67812 179 aa-1.18□□□□□ -2.6
PCNX1-208ENST00000554707 CRIPTQ9P021 101 aa-1.18□□□□□ -2.6
PCNX1-208ENST00000554707 NDUFA2O43678 99 aa-1.19□□□□□ -2.6
PCNX1-208ENST00000554707 AKAIN1P0CW23 69 aa-1.19□□□□□ -2.6
PCNX1-208ENST00000554707 TRAPPC2P0DI81 140 aa-1.19□□□□□ -2.6
PCNX1-208ENST00000554707 TRAPPC2BP0DI82 140 aa-1.19□□□□□ -2.6
PCNX1-208ENST00000554707 FGF7P21781 194 aa-1.19□□□□□ -2.6
PCNX1-208ENST00000554707 C9orf153Q5TBE3 101 aa-1.19□□□□□ -2.6
PCNX1-208ENST00000554707 FASNP49327 2511 aaKnown RBP-1.19□□□□□ -2.6
PCNX1-208ENST00000554707 USP9XQ93008 2570 aaPredicted RBP-1.19□□□□□ -2.6
PCNX1-208ENST00000554707 UBE2L5PA0A1B0GUS4 154 aa-1.2□□□□□ -2.6
PCNX1-208ENST00000554707 SPRR2EP22531 72 aa-1.2□□□□□ -2.6
PCNX1-208ENST00000554707 UBE2L3P68036 154 aaKnown RBP-1.2□□□□□ -2.6
PCNX1-208ENST00000554707 TSC22D3Q99576 134 aa-1.2□□□□□ -2.6
PCNX1-208ENST00000554707 FAM107BQ9H098 131 aa-1.2□□□□□ -2.6
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms