RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 TMEM218A2RU14 115 aa7.6□□□□□ -1.19
DDX54-206ENST00000549271 UQCC3Q6UW78 93 aa7.6□□□□□ -1.19
DDX54-206ENST00000549271 OPRPNQ99935 248 aaPredicted RBP7.6□□□□□ -1.19
DDX54-206ENST00000549271 PRR3P79522 188 aaKnown RBP7.59□□□□□ -1.19
DDX54-206ENST00000549271 MAJINQ3KP22 176 aa7.59□□□□□ -1.19
DDX54-206ENST00000549271 SPANXA1Q9NS26 97 aa7.59□□□□□ -1.19
DDX54-206ENST00000549271 MRPS36P82909 103 aaKnown RBP7.58□□□□□ -1.2
DDX54-206ENST00000549271 STPG4Q8N801 248 aa7.58□□□□□ -1.2
DDX54-206ENST00000549271 IMMP2LQ96T52 175 aa7.58□□□□□ -1.2
DDX54-206ENST00000549271 LINC00474Q9P2X8 69 aa7.58□□□□□ -1.2
DDX54-206ENST00000549271 PKIGQ9Y2B9 76 aa7.58□□□□□ -1.2
DDX54-206ENST00000549271 LAMTOR2Q9Y2Q5 125 aa7.58□□□□□ -1.2
DDX54-206ENST00000549271 IGKV2-24A0A0C4DH68 120 aa7.57□□□□□ -1.2
DDX54-206ENST00000549271 LOC389332A0A1B0GUA5 103 aa7.57□□□□□ -1.2
DDX54-206ENST00000549271 COX7A2LO14548 114 aa7.57□□□□□ -1.2
DDX54-206ENST00000549271 C5orf38Q86SI9 138 aa7.57□□□□□ -1.2
DDX54-206ENST00000549271 IGLV4-69A0A075B6H9 119 aa7.56□□□□□ -1.2
DDX54-206ENST00000549271 A0A096LNI7 61 aa7.56□□□□□ -1.2
DDX54-206ENST00000549271 ZNF561-AS1K7EIQ3 104 aa7.56□□□□□ -1.2
DDX54-206ENST00000549271 RAB5AP20339 215 aa7.56□□□□□ -1.2
DDX54-206ENST00000549271 MALP21145 153 aa7.56□□□□□ -1.2
DDX54-206ENST00000549271 SYCNQ0VAF6 134 aa7.56□□□□□ -1.2
DDX54-206ENST00000549271 REG3GQ6UW15 175 aa7.56□□□□□ -1.2
DDX54-206ENST00000549271 Q8N8P6 123 aa7.56□□□□□ -1.2
DDX54-206ENST00000549271 CARD19Q96LW7 228 aa7.56□□□□□ -1.2
DDX54-206ENST00000549271 SEC11CQ9BY50 192 aa7.56□□□□□ -1.2
DDX54-206ENST00000549271 CTDSP1Q9GZU7 261 aa7.56□□□□□ -1.2
DDX54-206ENST00000549271 MAP1LC3AQ9H492 121 aa7.56□□□□□ -1.2
DDX54-206ENST00000549271 PYGO1Q9Y3Y4 419 aa7.56□□□□□ -1.2
DDX54-206ENST00000549271 IGHV3OR16-9A0A0B4J2B5 98 aa7.55□□□□□ -1.2
DDX54-206ENST00000549271 SPINK6Q6UWN8 80 aa7.55□□□□□ -1.2
DDX54-206ENST00000549271 IGLV4-3A0A075B6K6 122 aa7.54□□□□□ -1.2
DDX54-206ENST00000549271 SRSF9Q13242 221 aaKnown RBP eCLIP7.54□□□□□ -1.2
DDX54-206ENST00000549271 C10orf91Q5T1B1 145 aa7.54□□□□□ -1.2
DDX54-206ENST00000549271 COMMD7Q86VX2 200 aa7.54□□□□□ -1.2
DDX54-206ENST00000549271 TRAV9-1A0A075B6T8 112 aa7.53□□□□□ -1.2
DDX54-206ENST00000549271 KIAA1644Q3SXP7 199 aa7.53□□□□□ -1.2
DDX54-206ENST00000549271 C2orf48Q96LS8 159 aa7.53□□□□□ -1.2
DDX54-206ENST00000549271 IFITM10A6NMD0 228 aa7.52□□□□□ -1.21
DDX54-206ENST00000549271 IFI27P40305 119 aaPredicted RBP7.52□□□□□ -1.21
DDX54-206ENST00000549271 C2orf66Q6UXQ4 117 aa7.52□□□□□ -1.21
DDX54-206ENST00000549271 APOMO95445 188 aa7.51□□□□□ -1.21
DDX54-206ENST00000549271 LINC00242Q5T6M2 205 aa7.51□□□□□ -1.21
DDX54-206ENST00000549271 ZC2HC1BQ5TFG8 222 aa7.51□□□□□ -1.21
DDX54-206ENST00000549271 Q6ZRP5 223 aa7.51□□□□□ -1.21
DDX54-206ENST00000549271 TMEM141Q96I45 108 aa7.51□□□□□ -1.21
DDX54-206ENST00000549271 CAMK2N2Q96S95 79 aa7.51□□□□□ -1.21
DDX54-206ENST00000549271 CYSLTR1Q9Y271 337 aa7.51□□□□□ -1.21
DDX54-206ENST00000549271 LOC107984640A0A0U1RRK4 108 aa7.5□□□□□ -1.21
DDX54-206ENST00000549271 IGIPA6NJ69 53 aa7.5□□□□□ -1.21
DDX54-206ENST00000549271 K7EMI3 77 aa7.5□□□□□ -1.21
DDX54-206ENST00000549271 PTTG1IPP53801 180 aa7.5□□□□□ -1.21
DDX54-206ENST00000549271 SPAG11BQ08648 103 aa7.5□□□□□ -1.21
DDX54-206ENST00000549271 ORMDL2Q53FV1 153 aa7.5□□□□□ -1.21
DDX54-206ENST00000549271 LINC00173Q6ZV60 143 aa7.5□□□□□ -1.21
DDX54-206ENST00000549271 OR10D4PQ8NGN7 298 aa7.5□□□□□ -1.21
DDX54-206ENST00000549271 AMELXQ99217 191 aa7.5□□□□□ -1.21
DDX54-206ENST00000549271 NXT2Q9NPJ8 142 aaKnown RBP7.5□□□□□ -1.21
DDX54-206ENST00000549271 CARHSP1Q9Y2V2 147 aaKnown RBP7.5□□□□□ -1.21
DDX54-206ENST00000549271 A0A087WZ39 114 aa7.49□□□□□ -1.21
DDX54-206ENST00000549271 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.49□□□□□ -1.21
DDX54-206ENST00000549271 UBE2D1P51668 147 aa7.49□□□□□ -1.21
DDX54-206ENST00000549271 RNF151Q2KHN1 245 aa7.49□□□□□ -1.21
DDX54-206ENST00000549271 ORAOV1Q8WV07 137 aa7.49□□□□□ -1.21
DDX54-206ENST00000549271 GNB1LQ9BYB4 327 aa7.49□□□□□ -1.21
DDX54-206ENST00000549271 F8WDY8 70 aa7.48□□□□□ -1.21
DDX54-206ENST00000549271 GAGE2BQ13066 116 aa7.48□□□□□ -1.21
DDX54-206ENST00000549271 KIAA0087Q14695 138 aa7.48□□□□□ -1.21
DDX54-206ENST00000549271 C10orf25Q5T742 122 aa7.48□□□□□ -1.21
DDX54-206ENST00000549271 TEX43Q6ZNM6 134 aa7.48□□□□□ -1.21
DDX54-206ENST00000549271 TGIF2-C20orf24A0A0A6YYL0 155 aa7.47□□□□□ -1.21
DDX54-206ENST00000549271 A0A1W2PNN7 141 aa7.47□□□□□ -1.21
DDX54-206ENST00000549271 NPSP0C0P6 89 aa7.47□□□□□ -1.21
DDX54-206ENST00000549271 S100PP25815 95 aa7.47□□□□□ -1.21
DDX54-206ENST00000549271 UNQ6190/PRO20217Q6UXQ8 127 aa7.47□□□□□ -1.21
DDX54-206ENST00000549271 TOMM6Q96B49 74 aa7.47□□□□□ -1.21
DDX54-206ENST00000549271 ALKBH7Q9BT30 221 aaPredicted RBP7.47□□□□□ -1.21
DDX54-206ENST00000549271 VCX2Q9H322 139 aa7.47□□□□□ -1.21
DDX54-206ENST00000549271 MRPL35Q9NZE8 188 aaKnown RBP7.47□□□□□ -1.21
DDX54-206ENST00000549271 LINC01546A6NGU7 62 aa7.46□□□□□ -1.22
DDX54-206ENST00000549271 RHEBQ15382 184 aa7.46□□□□□ -1.22
DDX54-206ENST00000549271 FAM19A3Q7Z5A8 133 aa7.46□□□□□ -1.22
DDX54-206ENST00000549271 RPS10P5Q9NQ39 176 aa7.46□□□□□ -1.22
DDX54-206ENST00000549271 NDUFA1O15239 70 aa7.45□□□□□ -1.22
DDX54-206ENST00000549271 COX19Q49B96 90 aa7.45□□□□□ -1.22
DDX54-206ENST00000549271 Q6ZN92 141 aa7.45□□□□□ -1.22
DDX54-206ENST00000549271 LINC01561Q8N1V8 128 aa7.45□□□□□ -1.22
DDX54-206ENST00000549271 C2orf88Q9BSF0 95 aa7.45□□□□□ -1.22
DDX54-206ENST00000549271 C6orf48Q9UBA6 75 aa7.45□□□□□ -1.22
DDX54-206ENST00000549271 G0S2P27469 103 aa7.44□□□□□ -1.22
DDX54-206ENST00000549271 RPL18AQ02543 176 aaKnown RBP7.44□□□□□ -1.22
DDX54-206ENST00000549271 C9orf116Q5BN46 136 aaPredicted RBP7.44□□□□□ -1.22
DDX54-206ENST00000549271 TIMM17AQ99595 171 aa7.44□□□□□ -1.22
DDX54-206ENST00000549271 MRPL18Q9H0U6 180 aaKnown RBP7.44□□□□□ -1.22
DDX54-206ENST00000549271 FSIP2Q5CZC0 6907 aa7.44□□□□□ -1.22
DDX54-206ENST00000549271 TLX1NBP0CAT3 122 aa7.43□□□□□ -1.22
DDX54-206ENST00000549271 FABP9Q0Z7S8 132 aa7.43□□□□□ -1.22
DDX54-206ENST00000549271 C2orf82Q6UX34 121 aa7.43□□□□□ -1.22
DDX54-206ENST00000549271 ERASQ7Z444 233 aa7.43□□□□□ -1.22
DDX54-206ENST00000549271 MT-ND6P03923 174 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms