RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 HEATR5BQ9P2D3 2071 aa2□□□□□ -2.09
SCAF11-210ENST00000547654 DOCK10Q96BY6 2186 aa1.99□□□□□ -2.09
SCAF11-210ENST00000547654 MIF4GDA9UHW6 222 aaKnown RBP1.99□□□□□ -2.09
SCAF11-210ENST00000547654 IFNGP01579 166 aa1.99□□□□□ -2.09
SCAF11-210ENST00000547654 COX7CP15954 63 aa1.99□□□□□ -2.09
SCAF11-210ENST00000547654 SCIMPQ6UWF3 145 aa1.99□□□□□ -2.09
SCAF11-210ENST00000547654 NAA38Q9BRA0 125 aaKnown RBP1.99□□□□□ -2.09
SCAF11-210ENST00000547654 PKHD1P08F94 4074 aa1.99□□□□□ -2.09
SCAF11-210ENST00000547654 KMT2AQ03164 3969 aa1.99□□□□□ -2.09
SCAF11-210ENST00000547654 HUWE1Q7Z6Z7 4374 aaKnown RBP1.98□□□□□ -2.09
SCAF11-210ENST00000547654 FREM1Q5H8C1 2179 aa1.98□□□□□ -2.09
SCAF11-210ENST00000547654 H3BRM9 83 aa1.98□□□□□ -2.09
SCAF11-210ENST00000547654 M0R129 80 aa1.98□□□□□ -2.09
SCAF11-210ENST00000547654 M0R2P5 195 aa1.98□□□□□ -2.09
SCAF11-210ENST00000547654 APODP05090 189 aa1.98□□□□□ -2.09
SCAF11-210ENST00000547654 S100PP25815 95 aa1.98□□□□□ -2.09
SCAF11-210ENST00000547654 ATP11AUNQ6ZP68 121 aa1.98□□□□□ -2.09
SCAF11-210ENST00000547654 Q6ZRN7 208 aaPredicted RBP1.98□□□□□ -2.09
SCAF11-210ENST00000547654 C3orf62Q6ZUJ4 267 aa1.98□□□□□ -2.09
SCAF11-210ENST00000547654 TCTEX1D1Q8N7M0 179 aa1.98□□□□□ -2.09
SCAF11-210ENST00000547654 ATP6V0E2Q8NHE4 81 aa1.98□□□□□ -2.09
SCAF11-210ENST00000547654 LINC00052Q96N35 136 aa1.98□□□□□ -2.09
SCAF11-210ENST00000547654 SDF2Q99470 211 aa1.98□□□□□ -2.09
SCAF11-210ENST00000547654 SNURFQ9Y675 71 aa1.98□□□□□ -2.09
SCAF11-210ENST00000547654 FAT4Q6V0I7 4981 aa1.97□□□□□ -2.09
SCAF11-210ENST00000547654 HSPG2P98160 4391 aa1.97□□□□□ -2.09
SCAF11-210ENST00000547654 ZNF25P17030 456 aaPredicted RBP1.97□□□□□ -2.09
SCAF11-210ENST00000547654 MRPS10P82664 201 aaKnown RBP1.97□□□□□ -2.09
SCAF11-210ENST00000547654 LINC01545Q5VT33 79 aa1.97□□□□□ -2.09
SCAF11-210ENST00000547654 KRTAP26-1Q6PEX3 210 aa1.97□□□□□ -2.09
SCAF11-210ENST00000547654 IDO2Q6ZQW0 420 aa1.97□□□□□ -2.09
SCAF11-210ENST00000547654 SNX29P2Q8IUI4 249 aa1.97□□□□□ -2.09
SCAF11-210ENST00000547654 PATE1Q8WXA2 126 aa1.97□□□□□ -2.09
SCAF11-210ENST00000547654 COPS9Q8WXC6 57 aa1.97□□□□□ -2.09
SCAF11-210ENST00000547654 CDC42SE1Q9NRR8 79 aa1.97□□□□□ -2.09
SCAF11-210ENST00000547654 NOP16Q9Y3C1 178 aaKnown RBP1.97□□□□□ -2.09
SCAF11-210ENST00000547654 ALMS1Q8TCU4 4167 aa1.97□□□□□ -2.09
SCAF11-210ENST00000547654 RNF213Q63HN8 5207 aa1.96□□□□□ -2.1
SCAF11-210ENST00000547654 IGF2P01344 180 aa1.96□□□□□ -2.1
SCAF11-210ENST00000547654 MEIG1Q5JSS6 88 aa1.96□□□□□ -2.1
SCAF11-210ENST00000547654 ZCCHC23Q6ZST2 131 aa1.96□□□□□ -2.1
SCAF11-210ENST00000547654 Q8N2B8 174 aa1.96□□□□□ -2.1
SCAF11-210ENST00000547654 MED12Q93074 2177 aa1.96□□□□□ -2.1
SCAF11-210ENST00000547654 A0A1W2PRS3 328 aa1.95□□□□□ -2.1
SCAF11-210ENST00000547654 A6NN06 94 aa1.95□□□□□ -2.1
SCAF11-210ENST00000547654 J3QLW9 94 aa1.95□□□□□ -2.1
SCAF11-210ENST00000547654 GEMIN2O14893 280 aaKnown RBP1.95□□□□□ -2.1
SCAF11-210ENST00000547654 NUPR1O60356 82 aa1.95□□□□□ -2.1
SCAF11-210ENST00000547654 RNASE3P12724 160 aaKnown RBP1.95□□□□□ -2.1
SCAF11-210ENST00000547654 HMGA1P17096 107 aaKnown RBP1.95□□□□□ -2.1
SCAF11-210ENST00000547654 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.95□□□□□ -2.1
SCAF11-210ENST00000547654 SLC25A26Q70HW3 274 aa1.95□□□□□ -2.1
SCAF11-210ENST00000547654 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.95□□□□□ -2.1
SCAF11-210ENST00000547654 DPH3Q96FX2 82 aa1.95□□□□□ -2.1
SCAF11-210ENST00000547654 PDCD10Q9BUL8 212 aa1.95□□□□□ -2.1
SCAF11-210ENST00000547654 RERGLQ9H628 205 aa1.95□□□□□ -2.1
SCAF11-210ENST00000547654 MED9Q9NWA0 146 aa1.95□□□□□ -2.1
SCAF11-210ENST00000547654 TAS2R8Q9NYW2 309 aa1.95□□□□□ -2.1
SCAF11-210ENST00000547654 TANC2Q9HCD6 1990 aa1.95□□□□□ -2.1
SCAF11-210ENST00000547654 CADP27708 2225 aa1.95□□□□□ -2.1
SCAF11-210ENST00000547654 ANKRD36A6QL64 1941 aa1.94□□□□□ -2.1
SCAF11-210ENST00000547654 TRAV12-2A0A075B6T6 113 aa1.94□□□□□ -2.1
SCAF11-210ENST00000547654 TRBV6-4A0A1B0GX49 114 aa1.94□□□□□ -2.1
SCAF11-210ENST00000547654 F6UZH7 168 aa1.94□□□□□ -2.1
SCAF11-210ENST00000547654 MRPS14O60783 128 aaKnown RBP1.94□□□□□ -2.1
SCAF11-210ENST00000547654 IGHV3-33P01772 117 aa1.94□□□□□ -2.1
SCAF11-210ENST00000547654 AKAIN1P0CW23 69 aa1.94□□□□□ -2.1
SCAF11-210ENST00000547654 FGF7P21781 194 aa1.94□□□□□ -2.1
SCAF11-210ENST00000547654 Q6ZUT4 128 aa1.94□□□□□ -2.1
SCAF11-210ENST00000547654 DNAH11Q96DT5 4516 aa1.94□□□□□ -2.1
SCAF11-210ENST00000547654 MYCBP2O75592 4640 aa1.94□□□□□ -2.1
SCAF11-210ENST00000547654 DMBT1Q9UGM3 2413 aaPredicted RBP1.93□□□□□ -2.1
SCAF11-210ENST00000547654 FAT2Q9NYQ8 4349 aa1.93□□□□□ -2.1
SCAF11-210ENST00000547654 ADCYAP1P18509 176 aa1.93□□□□□ -2.1
SCAF11-210ENST00000547654 TFF3Q07654 80 aa1.93□□□□□ -2.1
SCAF11-210ENST00000547654 RHOHQ15669 191 aa1.93□□□□□ -2.1
SCAF11-210ENST00000547654 MPV17LQ2QL34 196 aa1.93□□□□□ -2.1
SCAF11-210ENST00000547654 OCIAD2Q56VL3 154 aa1.93□□□□□ -2.1
SCAF11-210ENST00000547654 MIC13Q5XKP0 118 aa1.93□□□□□ -2.1
SCAF11-210ENST00000547654 C15orf53Q8NAA6 179 aa1.93□□□□□ -2.1
SCAF11-210ENST00000547654 ZNF625Q96I27 306 aaPredicted RBP1.93□□□□□ -2.1
SCAF11-210ENST00000547654 TCEAL7Q9BRU2 100 aa1.93□□□□□ -2.1
SCAF11-210ENST00000547654 TMEM14CQ9P0S9 112 aa1.93□□□□□ -2.1
SCAF11-210ENST00000547654 KRTAP13-4Q3LI77 160 aa1.92□□□□□ -2.1
SCAF11-210ENST00000547654 DYNLRB2Q8TF09 96 aa1.92□□□□□ -2.1
SCAF11-210ENST00000547654 SNRNP25Q9BV90 132 aaKnown RBP1.92□□□□□ -2.1
SCAF11-210ENST00000547654 SCN3BQ9NY72 215 aa1.92□□□□□ -2.1
SCAF11-210ENST00000547654 PLCE1Q9P212 2302 aa1.92□□□□□ -2.1
SCAF11-210ENST00000547654 FREM3P0C091 2139 aa1.91□□□□□ -2.1
SCAF11-210ENST00000547654 DNAJC13O75165 2243 aa1.91□□□□□ -2.1
SCAF11-210ENST00000547654 IGLV3-32A0A0A0MS00 114 aa1.91□□□□□ -2.1
SCAF11-210ENST00000547654 TRAV2A0A0B4J234 112 aa1.91□□□□□ -2.1
SCAF11-210ENST00000547654 CORTO00230 105 aa1.91□□□□□ -2.1
SCAF11-210ENST00000547654 CCL25O15444 150 aa1.91□□□□□ -2.1
SCAF11-210ENST00000547654 SNAPC5O75971 98 aa1.91□□□□□ -2.1
SCAF11-210ENST00000547654 DNAL4O96015 105 aa1.91□□□□□ -2.1
SCAF11-210ENST00000547654 HIST1H1DP16402 221 aaKnown RBP1.91□□□□□ -2.1
SCAF11-210ENST00000547654 POLR2JP52435 117 aaKnown RBP1.91□□□□□ -2.1
SCAF11-210ENST00000547654 DEFB133Q30KQ1 61 aa1.91□□□□□ -2.1
SCAF11-210ENST00000547654 UNQ5815/PRO19632Q6UWF5 114 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms