RNA–Protein interactions for RNA: ENST00000543082.5

TCF4-208, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 2,399 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-208ENST00000543082 SPTA1P02549 2419 aa6.88□□□□□ -1.31
TCF4-208ENST00000543082 IGHV4-61A0A0C4DH41 118 aa6.88□□□□□ -1.31
TCF4-208ENST00000543082 FAM236DA0A1B0GTK5 79 aa6.88□□□□□ -1.31
TCF4-208ENST00000543082 LY6G6DO95868 133 aa6.88□□□□□ -1.31
TCF4-208ENST00000543082 FAM236CP0DP71 79 aa6.88□□□□□ -1.31
TCF4-208ENST00000543082 SS18Q15532 418 aa6.88□□□□□ -1.31
TCF4-208ENST00000543082 C10orf105Q8TEF2 133 aa6.88□□□□□ -1.31
TCF4-208ENST00000543082 TOMM7Q9P0U1 55 aa6.88□□□□□ -1.31
TCF4-208ENST00000543082 ASH1LQ9NR48 2969 aaKnown RBP6.88□□□□□ -1.31
TCF4-208ENST00000543082 HILS1P60008 231 aa6.88□□□□□ -1.31
TCF4-208ENST00000543082 LINC00167Q96N53 147 aa6.88□□□□□ -1.31
TCF4-208ENST00000543082 SVEP1Q4LDE5 3571 aa6.88□□□□□ -1.31
TCF4-208ENST00000543082 TRAV23DV6A0A075B6W5 121 aa6.87□□□□□ -1.31
TCF4-208ENST00000543082 SLPIP03973 132 aa6.87□□□□□ -1.31
TCF4-208ENST00000543082 LYPD5Q6UWN5 251 aa6.87□□□□□ -1.31
TCF4-208ENST00000543082 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.87□□□□□ -1.31
TCF4-208ENST00000543082 TRBV6-4A0A1B0GX49 114 aa6.87□□□□□ -1.31
TCF4-208ENST00000543082 PAX4O43316 350 aa6.87□□□□□ -1.31
TCF4-208ENST00000543082 BCE1O60756 84 aa6.87□□□□□ -1.31
TCF4-208ENST00000543082 SERP1Q9Y6X1 66 aa6.87□□□□□ -1.31
TCF4-208ENST00000543082 IL17DQ8TAD2 202 aa6.86□□□□□ -1.31
TCF4-208ENST00000543082 NBASA2RRP1 2371 aa6.86□□□□□ -1.31
TCF4-208ENST00000543082 TRGV1A0A0A0MS02 117 aa6.86□□□□□ -1.31
TCF4-208ENST00000543082 LOC100996750A0A140TA64 210 aa6.86□□□□□ -1.31
TCF4-208ENST00000543082 EPM2AB3EWF7 344 aa6.86□□□□□ -1.31
TCF4-208ENST00000543082 XCL1P47992 114 aa6.86□□□□□ -1.31
TCF4-208ENST00000543082 C20orf197Q8N268 126 aa6.86□□□□□ -1.31
TCF4-208ENST00000543082 UBE2E2Q96LR5 201 aa6.86□□□□□ -1.31
TCF4-208ENST00000543082 KRTAP4-6Q9BYQ5 205 aa6.86□□□□□ -1.31
TCF4-208ENST00000543082 UBL5Q9BZL1 73 aa6.86□□□□□ -1.31
TCF4-208ENST00000543082 MAP6D1Q9H9H5 199 aa6.86□□□□□ -1.31
TCF4-208ENST00000543082 XCL2Q9UBD3 114 aa6.86□□□□□ -1.31
TCF4-208ENST00000543082 PFN2P35080 140 aa6.85□□□□□ -1.31
TCF4-208ENST00000543082 ENHOQ6UWT2 76 aa6.85□□□□□ -1.31
TCF4-208ENST00000543082 AKAP6Q13023 2319 aa6.85□□□□□ -1.31
TCF4-208ENST00000543082 TMEM256-PLSCR3K7ERE1 68 aa6.84□□□□□ -1.31
TCF4-208ENST00000543082 MSMBP08118 114 aa6.84□□□□□ -1.31
TCF4-208ENST00000543082 FAM19A1Q7Z5A9 133 aa6.84□□□□□ -1.31
TCF4-208ENST00000543082 RELNP78509 3460 aa6.84□□□□□ -1.31
TCF4-208ENST00000543082 ZFHX3Q15911 3703 aa6.84□□□□□ -1.31
TCF4-208ENST00000543082 WFDC9Q8NEX5 89 aa6.84□□□□□ -1.31
TCF4-208ENST00000543082 HIVEP3Q5T1R4 2406 aa6.84□□□□□ -1.32
TCF4-208ENST00000543082 TRAV7A0A075B6U4 112 aa6.83□□□□□ -1.32
TCF4-208ENST00000543082 IGHV4-59P01825 116 aa6.83□□□□□ -1.32
TCF4-208ENST00000543082 UCNP55089 124 aa6.83□□□□□ -1.32
TCF4-208ENST00000543082 PRO0628Q9UI54 55 aa6.83□□□□□ -1.32
TCF4-208ENST00000543082 NBL1P41271 181 aa6.82□□□□□ -1.32
TCF4-208ENST00000543082 SLURP1P55000 103 aa6.82□□□□□ -1.32
TCF4-208ENST00000543082 Q8N814 137 aa6.82□□□□□ -1.32
TCF4-208ENST00000543082 A0A087WZ39 114 aa6.82□□□□□ -1.32
TCF4-208ENST00000543082 IGHV3OR16-9A0A0B4J2B5 98 aa6.82□□□□□ -1.32
TCF4-208ENST00000543082 TMEM86BQ8N661 226 aa6.82□□□□□ -1.32
TCF4-208ENST00000543082 ZFHX2Q9C0A1 2572 aaPredicted RBP6.82□□□□□ -1.32
TCF4-208ENST00000543082 H7BZZ5 65 aa6.81□□□□□ -1.32
TCF4-208ENST00000543082 DYNLRB2Q8TF09 96 aa6.81□□□□□ -1.32
TCF4-208ENST00000543082 DEFB112Q30KQ8 113 aa6.81□□□□□ -1.32
TCF4-208ENST00000543082 Q6ZTI0 123 aa6.81□□□□□ -1.32
TCF4-208ENST00000543082 IGKV3OR2-268A0A0C4DH90 116 aa6.8□□□□□ -1.32
TCF4-208ENST00000543082 A0A1W2PRX2 142 aa6.8□□□□□ -1.32
TCF4-208ENST00000543082 KLKP1Q107X0 134 aa6.8□□□□□ -1.32
TCF4-208ENST00000543082 C1orf158Q8N1D5 194 aa6.8□□□□□ -1.32
TCF4-208ENST00000543082 C11orf44Q8N8P7 122 aa6.8□□□□□ -1.32
TCF4-208ENST00000543082 B4DSR2 109 aa6.79□□□□□ -1.32
TCF4-208ENST00000543082 CREBBPQ92793 2442 aa6.79□□□□□ -1.32
TCF4-208ENST00000543082 CELSR1Q9NYQ6 3014 aa6.79□□□□□ -1.32
TCF4-208ENST00000543082 IGHV4-30-2A0A087WSY4 118 aa6.79□□□□□ -1.32
TCF4-208ENST00000543082 DEFB136Q30KP8 78 aa6.79□□□□□ -1.32
TCF4-208ENST00000543082 CCL19Q99731 98 aa6.79□□□□□ -1.32
TCF4-208ENST00000543082 CEP295Q9C0D2 2601 aa6.78□□□□□ -1.32
TCF4-208ENST00000543082 SMIM26A0A096LP01 95 aa6.78□□□□□ -1.32
TCF4-208ENST00000543082 C6orf226Q5I0X4 101 aa6.78□□□□□ -1.32
TCF4-208ENST00000543082 STHQ8IWL8 128 aa6.78□□□□□ -1.32
TCF4-208ENST00000543082 LINC00482Q8N8I6 264 aa6.78□□□□□ -1.32
TCF4-208ENST00000543082 ZNF702PQ9H963 129 aa6.78□□□□□ -1.32
TCF4-208ENST00000543082 IGLV4-60A0A075B6I1 120 aa6.77□□□□□ -1.32
TCF4-208ENST00000543082 C19orf84I3L1E1 186 aa6.77□□□□□ -1.32
TCF4-208ENST00000543082 NANOS2P60321 138 aaKnown RBP6.77□□□□□ -1.32
TCF4-208ENST00000543082 LOC110117498A0A087WWA1 95 aa6.77□□□□□ -1.33
TCF4-208ENST00000543082 A0A096LNT2 108 aa6.77□□□□□ -1.33
TCF4-208ENST00000543082 Q6ZQT0 140 aa6.77□□□□□ -1.33
TCF4-208ENST00000543082 DEFB114Q30KQ6 69 aa6.76□□□□□ -1.33
TCF4-208ENST00000543082 LINC00336Q6ZUF6 198 aa6.76□□□□□ -1.33
TCF4-208ENST00000543082 Q8IZM0 81 aa6.76□□□□□ -1.33
TCF4-208ENST00000543082 C11orf68Q9H3H3 251 aaKnown RBP6.76□□□□□ -1.33
TCF4-208ENST00000543082 TRBV6-8A0A0A6YYG3 113 aa6.76□□□□□ -1.33
TCF4-208ENST00000543082 ZNF561-AS1K7EIQ3 104 aa6.76□□□□□ -1.33
TCF4-208ENST00000543082 ATP5EP56381 51 aaPredicted RBP6.76□□□□□ -1.33
TCF4-208ENST00000543082 C18orf65Q6ZTR6 163 aa6.76□□□□□ -1.33
TCF4-208ENST00000543082 NOP10Q9NPE3 64 aaKnown RBP6.76□□□□□ -1.33
TCF4-208ENST00000543082 ATRXP46100 2492 aa6.76□□□□□ -1.33
TCF4-208ENST00000543082 LOC100131303A0A0U1RQF7 123 aa6.75□□□□□ -1.33
TCF4-208ENST00000543082 NDUFC1O43677 76 aa6.75□□□□□ -1.33
TCF4-208ENST00000543082 LINC01547P58512 204 aaPredicted RBP6.75□□□□□ -1.33
TCF4-208ENST00000543082 RBM3P98179 157 aaKnown RBP6.75□□□□□ -1.33
TCF4-208ENST00000543082 ODF3L2Q3SX64 289 aa6.75□□□□□ -1.33
TCF4-208ENST00000543082 CSPG4Q6UVK1 2322 aa6.75□□□□□ -1.33
TCF4-208ENST00000543082 LINC00959A0A1B0GUT2 108 aa6.75□□□□□ -1.33
TCF4-208ENST00000543082 C4orf3Q8WVX3 66 aa6.75□□□□□ -1.33
TCF4-208ENST00000543082 TRGV2A0A075B6R0 118 aa6.74□□□□□ -1.33
TCF4-208ENST00000543082 CXCL6P80162 114 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms