RNA–Protein interactions for RNA: ENST00000534273.1

PACS1-215, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 3

Gene PACS1, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-215ENST00000534273 Q8N8P6 123 aa12.12□□□□□ -0.47
PACS1-215ENST00000534273 LINC00526Q96FQ7 95 aa12.11□□□□□ -0.47
PACS1-215ENST00000534273 MRPL18Q9H0U6 180 aaKnown RBP12.11□□□□□ -0.47
PACS1-215ENST00000534273 HIST1H2BKO60814 126 aa12.1□□□□□ -0.47
PACS1-215ENST00000534273 HIST1H2BJP06899 126 aa12.1□□□□□ -0.47
PACS1-215ENST00000534273 CHTF8P0CG12 524 aa12.1□□□□□ -0.47
PACS1-215ENST00000534273 HIST1H2BOP23527 126 aa12.1□□□□□ -0.47
PACS1-215ENST00000534273 HIST1H2BBP33778 126 aa12.1□□□□□ -0.47
PACS1-215ENST00000534273 HIST1H2BDP58876 126 aa12.1□□□□□ -0.47
PACS1-215ENST00000534273 HIST1H2BCP62807 126 aa12.1□□□□□ -0.47
PACS1-215ENST00000534273 HIST2H2BEQ16778 126 aa12.1□□□□□ -0.47
PACS1-215ENST00000534273 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.1□□□□□ -0.47
PACS1-215ENST00000534273 HIST1H2BHQ93079 126 aa12.1□□□□□ -0.47
PACS1-215ENST00000534273 HIST1H2BNQ99877 126 aa12.1□□□□□ -0.47
PACS1-215ENST00000534273 HIST1H2BMQ99879 126 aa12.1□□□□□ -0.47
PACS1-215ENST00000534273 PYGO1Q9Y3Y4 419 aa12.1□□□□□ -0.47
PACS1-215ENST00000534273 MALP21145 153 aa12.09□□□□□ -0.47
PACS1-215ENST00000534273 COX6A2Q02221 97 aa12.09□□□□□ -0.47
PACS1-215ENST00000534273 ZNF561-AS1K7EIQ3 104 aa12.08□□□□□ -0.48
PACS1-215ENST00000534273 IFI27P40305 119 aaPredicted RBP12.08□□□□□ -0.48
PACS1-215ENST00000534273 KRTAP10-4P60372 401 aaPredicted RBP12.08□□□□□ -0.48
PACS1-215ENST00000534273 KIAA1644Q3SXP7 199 aa12.08□□□□□ -0.48
PACS1-215ENST00000534273 C5orf38Q86SI9 138 aa12.08□□□□□ -0.48
PACS1-215ENST00000534273 PRSS3P2Q8NHM4 247 aa12.08□□□□□ -0.48
PACS1-215ENST00000534273 SPACA4Q8TDM5 124 aa12.08□□□□□ -0.48
PACS1-215ENST00000534273 IFITM10A6NMD0 228 aa12.07□□□□□ -0.48
PACS1-215ENST00000534273 DPH3Q96FX2 82 aa12.07□□□□□ -0.48
PACS1-215ENST00000534273 NXT2Q9NPJ8 142 aaKnown RBP12.07□□□□□ -0.48
PACS1-215ENST00000534273 IGLV4-3A0A075B6K6 122 aa12.06□□□□□ -0.48
PACS1-215ENST00000534273 K7EMI3 77 aa12.06□□□□□ -0.48
PACS1-215ENST00000534273 SYCNQ0VAF6 134 aa12.06□□□□□ -0.48
PACS1-215ENST00000534273 ORMDL2Q53FV1 153 aa12.06□□□□□ -0.48
PACS1-215ENST00000534273 COA6Q5JTJ3 125 aaKnown RBP12.06□□□□□ -0.48
PACS1-215ENST00000534273 CARD19Q96LW7 228 aa12.06□□□□□ -0.48
PACS1-215ENST00000534273 CYSLTR1Q9Y271 337 aa12.06□□□□□ -0.48
PACS1-215ENST00000534273 IGLV4-69A0A075B6H9 119 aa12.05□□□□□ -0.48
PACS1-215ENST00000534273 A0A087WYN8 130 aa12.05□□□□□ -0.48
PACS1-215ENST00000534273 IGHV3OR16-9A0A0B4J2B5 98 aa12.05□□□□□ -0.48
PACS1-215ENST00000534273 C5orf52A6NGY3 159 aa12.05□□□□□ -0.48
PACS1-215ENST00000534273 S100A6P06703 90 aa12.05□□□□□ -0.48
PACS1-215ENST00000534273 C2orf66Q6UXQ4 117 aa12.05□□□□□ -0.48
PACS1-215ENST00000534273 LOC105371267A0A1B0GV96 52 aa12.04□□□□□ -0.48
PACS1-215ENST00000534273 TMEM141Q96I45 108 aa12.04□□□□□ -0.48
PACS1-215ENST00000534273 MYCBP2O75592 4640 aa12.04□□□□□ -0.48
PACS1-215ENST00000534273 APOMO95445 188 aa12.03□□□□□ -0.48
PACS1-215ENST00000534273 PLAC8Q9NZF1 115 aa12.03□□□□□ -0.48
PACS1-215ENST00000534273 IGKV2-24A0A0C4DH68 120 aa12.02□□□□□ -0.49
PACS1-215ENST00000534273 NDUFA6P56556 154 aa12.02□□□□□ -0.49
PACS1-215ENST00000534273 RPL37AP61513 92 aaKnown RBP12.02□□□□□ -0.49
PACS1-215ENST00000534273 MAJINQ3KP22 176 aa12.02□□□□□ -0.49
PACS1-215ENST00000534273 C2orf48Q96LS8 159 aa12.02□□□□□ -0.49
PACS1-215ENST00000534273 DMBT1Q9UGM3 2413 aaPredicted RBP12.02□□□□□ -0.49
PACS1-215ENST00000534273 A0A096LNI7 61 aa12.01□□□□□ -0.49
PACS1-215ENST00000534273 IGIPA6NJ69 53 aa12.01□□□□□ -0.49
PACS1-215ENST00000534273 LINC00242Q5T6M2 205 aa12.01□□□□□ -0.49
PACS1-215ENST00000534273 Q6ZRU5 148 aa12.01□□□□□ -0.49
PACS1-215ENST00000534273 ALKBH7Q9BT30 221 aaPredicted RBP12.01□□□□□ -0.49
PACS1-215ENST00000534273 PKIGQ9Y2B9 76 aa12.01□□□□□ -0.49
PACS1-215ENST00000534273 NPSP0C0P6 89 aa12□□□□□ -0.49
PACS1-215ENST00000534273 SNRPEP62304 92 aaKnown RBP12□□□□□ -0.49
PACS1-215ENST00000534273 SPAG11BQ08648 103 aa12□□□□□ -0.49
PACS1-215ENST00000534273 TEX43Q6ZNM6 134 aa12□□□□□ -0.49
PACS1-215ENST00000534273 OR10D4PQ8NGN7 298 aa12□□□□□ -0.49
PACS1-215ENST00000534273 CAMK2N2Q96S95 79 aa12□□□□□ -0.49
PACS1-215ENST00000534273 UBE2D1P51668 147 aa11.99□□□□□ -0.49
PACS1-215ENST00000534273 ZC2HC1BQ5TFG8 222 aa11.99□□□□□ -0.49
PACS1-215ENST00000534273 LINC00173Q6ZV60 143 aa11.99□□□□□ -0.49
PACS1-215ENST00000534273 ORAOV1Q8WV07 137 aa11.99□□□□□ -0.49
PACS1-215ENST00000534273 AMELXQ99217 191 aa11.99□□□□□ -0.49
PACS1-215ENST00000534273 G0S2P27469 103 aa11.98□□□□□ -0.49
PACS1-215ENST00000534273 Q6ZN92 141 aa11.98□□□□□ -0.49
PACS1-215ENST00000534273 C2orf88Q9BSF0 95 aa11.98□□□□□ -0.49
PACS1-215ENST00000534273 VCX2Q9H322 139 aa11.98□□□□□ -0.49
PACS1-215ENST00000534273 LINC00474Q9P2X8 69 aa11.98□□□□□ -0.49
PACS1-215ENST00000534273 A0A087WZ39 114 aa11.97□□□□□ -0.49
PACS1-215ENST00000534273 LINC01546A6NGU7 62 aa11.97□□□□□ -0.49
PACS1-215ENST00000534273 STPG4Q8N801 248 aa11.97□□□□□ -0.49
PACS1-215ENST00000534273 TOMM6Q96B49 74 aa11.97□□□□□ -0.49
PACS1-215ENST00000534273 LOC107984640A0A0U1RRK4 108 aa11.96□□□□□ -0.49
PACS1-215ENST00000534273 F8WDY8 70 aa11.95□□□□□ -0.5
PACS1-215ENST00000534273 C18orf32Q8TCD1 76 aa11.95□□□□□ -0.5
PACS1-215ENST00000534273 TIMM17AQ99595 171 aa11.95□□□□□ -0.5
PACS1-215ENST00000534273 PTTG1IPP53801 180 aa11.94□□□□□ -0.5
PACS1-215ENST00000534273 RNF151Q2KHN1 245 aa11.94□□□□□ -0.5
PACS1-215ENST00000534273 PAPPA-AS1Q5QFB9 102 aa11.94□□□□□ -0.5
PACS1-215ENST00000534273 HIST3H2BBQ8N257 126 aa11.94□□□□□ -0.5
PACS1-215ENST00000534273 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.93□□□□□ -0.5
PACS1-215ENST00000534273 HNRNPA3P51991 378 aaKnown RBP11.93□□□□□ -0.5
PACS1-215ENST00000534273 GAGE2BQ13066 116 aa11.93□□□□□ -0.5
PACS1-215ENST00000534273 ERASQ7Z444 233 aa11.93□□□□□ -0.5
PACS1-215ENST00000534273 FAM19A3Q7Z5A8 133 aa11.93□□□□□ -0.5
PACS1-215ENST00000534273 A0A0J9YXV3 536 aa11.92□□□□□ -0.5
PACS1-215ENST00000534273 KIAA0087Q14695 138 aa11.92□□□□□ -0.5
PACS1-215ENST00000534273 BAGE3Q86Y29 109 aa11.92□□□□□ -0.5
PACS1-215ENST00000534273 LINC01561Q8N1V8 128 aa11.92□□□□□ -0.5
PACS1-215ENST00000534273 C7orf33Q8WU49 177 aa11.92□□□□□ -0.5
PACS1-215ENST00000534273 SCGB3A1Q96QR1 104 aa11.92□□□□□ -0.5
PACS1-215ENST00000534273 MRPL35Q9NZE8 188 aaKnown RBP11.92□□□□□ -0.5
PACS1-215ENST00000534273 KRTAP29-1A8MX34 341 aaPredicted RBP11.91□□□□□ -0.5
PACS1-215ENST00000534273 NDUFA1O15239 70 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms