RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 HBBP68871 147 aa6.64□□□□□ -1.35
CAPN1-225ENST00000533704 CIRBPQ14011 172 aaKnown RBP6.64□□□□□ -1.35
CAPN1-225ENST00000533704 HIST3H2BBQ8N257 126 aa6.64□□□□□ -1.35
CAPN1-225ENST00000533704 YPEL4Q96NS1 127 aa6.64□□□□□ -1.35
CAPN1-225ENST00000533704 UBE2D4Q9Y2X8 147 aa6.64□□□□□ -1.35
CAPN1-225ENST00000533704 CBY1Q9Y3M2 126 aa6.64□□□□□ -1.35
CAPN1-225ENST00000533704 ZNF561-AS1K7EIQ3 104 aa6.63□□□□□ -1.35
CAPN1-225ENST00000533704 MALP21145 153 aa6.63□□□□□ -1.35
CAPN1-225ENST00000533704 HNRNPA3P51991 378 aaKnown RBP6.63□□□□□ -1.35
CAPN1-225ENST00000533704 CD164L2Q6UWJ8 174 aa6.63□□□□□ -1.35
CAPN1-225ENST00000533704 Q6ZUT4 128 aa6.63□□□□□ -1.35
CAPN1-225ENST00000533704 TMEM18Q96B42 140 aa6.63□□□□□ -1.35
CAPN1-225ENST00000533704 CARD19Q96LW7 228 aa6.63□□□□□ -1.35
CAPN1-225ENST00000533704 C20orf78Q9BR46 151 aa6.63□□□□□ -1.35
CAPN1-225ENST00000533704 COX7A2LO14548 114 aa6.62□□□□□ -1.35
CAPN1-225ENST00000533704 NPYP01303 97 aa6.62□□□□□ -1.35
CAPN1-225ENST00000533704 RPL39P62891 51 aaKnown RBP6.62□□□□□ -1.35
CAPN1-225ENST00000533704 PNRC1Q12796 327 aaPredicted RBP6.62□□□□□ -1.35
CAPN1-225ENST00000533704 PACRGQ96M98 296 aaPredicted RBP6.62□□□□□ -1.35
CAPN1-225ENST00000533704 SMIM2Q9BVW6 85 aa6.62□□□□□ -1.35
CAPN1-225ENST00000533704 TRBV24-1A0A075B6N3 115 aa6.61□□□□□ -1.35
CAPN1-225ENST00000533704 A0A096LNI7 61 aa6.61□□□□□ -1.35
CAPN1-225ENST00000533704 A0A1B0GXF2 115 aa6.61□□□□□ -1.35
CAPN1-225ENST00000533704 HIST1H2BKO60814 126 aa6.61□□□□□ -1.35
CAPN1-225ENST00000533704 HIST1H2BJP06899 126 aa6.61□□□□□ -1.35
CAPN1-225ENST00000533704 HIST1H2BOP23527 126 aa6.61□□□□□ -1.35
CAPN1-225ENST00000533704 HIST1H2BBP33778 126 aa6.61□□□□□ -1.35
CAPN1-225ENST00000533704 HIST1H2BDP58876 126 aa6.61□□□□□ -1.35
CAPN1-225ENST00000533704 HIST1H2BCP62807 126 aa6.61□□□□□ -1.35
CAPN1-225ENST00000533704 SYCNQ0VAF6 134 aa6.61□□□□□ -1.35
CAPN1-225ENST00000533704 HIST2H2BEQ16778 126 aa6.61□□□□□ -1.35
CAPN1-225ENST00000533704 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.61□□□□□ -1.35
CAPN1-225ENST00000533704 C5orf38Q86SI9 138 aa6.61□□□□□ -1.35
CAPN1-225ENST00000533704 STPG4Q8N801 248 aa6.61□□□□□ -1.35
CAPN1-225ENST00000533704 C7orf33Q8WU49 177 aa6.61□□□□□ -1.35
CAPN1-225ENST00000533704 HIST1H2BHQ93079 126 aa6.61□□□□□ -1.35
CAPN1-225ENST00000533704 HIST1H2BNQ99877 126 aa6.61□□□□□ -1.35
CAPN1-225ENST00000533704 HIST1H2BMQ99879 126 aa6.61□□□□□ -1.35
CAPN1-225ENST00000533704 PLAC8Q9NZF1 115 aa6.61□□□□□ -1.35
CAPN1-225ENST00000533704 CSDC2Q9Y534 153 aaKnown RBP6.61□□□□□ -1.35
CAPN1-225ENST00000533704 IGLV4-69A0A075B6H9 119 aa6.6□□□□□ -1.35
CAPN1-225ENST00000533704 IFITM10A6NMD0 228 aa6.6□□□□□ -1.35
CAPN1-225ENST00000533704 PHOX2AO14813 284 aa6.6□□□□□ -1.35
CAPN1-225ENST00000533704 OXTP01178 125 aa6.6□□□□□ -1.35
CAPN1-225ENST00000533704 FABP4P15090 132 aa6.6□□□□□ -1.35
CAPN1-225ENST00000533704 RPL32P62910 135 aaKnown RBP6.6□□□□□ -1.35
CAPN1-225ENST00000533704 ORMDL3Q8N138 153 aa6.6□□□□□ -1.35
CAPN1-225ENST00000533704 PRELID3AQ96N28 172 aa6.6□□□□□ -1.35
CAPN1-225ENST00000533704 TIMM21Q9BVV7 248 aa6.6□□□□□ -1.35
CAPN1-225ENST00000533704 CTDSP1Q9GZU7 261 aa6.6□□□□□ -1.35
CAPN1-225ENST00000533704 PRO1933Q9H354 126 aa6.6□□□□□ -1.35
CAPN1-225ENST00000533704 PPBPP02775 128 aa6.59□□□□□ -1.35
CAPN1-225ENST00000533704 JOSD1Q15040 202 aaPredicted RBP6.59□□□□□ -1.35
CAPN1-225ENST00000533704 TMEM136Q6ZRR5 245 aa6.59□□□□□ -1.35
CAPN1-225ENST00000533704 ATP5L2Q7Z4Y8 100 aa6.59□□□□□ -1.35
CAPN1-225ENST00000533704 CAMK2N2Q96S95 79 aa6.59□□□□□ -1.35
CAPN1-225ENST00000533704 OPRPNQ99935 248 aaPredicted RBP6.59□□□□□ -1.35
CAPN1-225ENST00000533704 PKIGQ9Y2B9 76 aa6.59□□□□□ -1.35
CAPN1-225ENST00000533704 LOC389332A0A1B0GUA5 103 aa6.58□□□□□ -1.36
CAPN1-225ENST00000533704 GAGE2BQ13066 116 aa6.58□□□□□ -1.36
CAPN1-225ENST00000533704 Q6ZRU5 148 aa6.58□□□□□ -1.36
CAPN1-225ENST00000533704 SPANXA1Q9NS26 97 aa6.58□□□□□ -1.36
CAPN1-225ENST00000533704 LRP1Q07954 4544 aaKnown RBP6.58□□□□□ -1.36
CAPN1-225ENST00000533704 PKHD1L1Q86WI1 4243 aa6.58□□□□□ -1.36
CAPN1-225ENST00000533704 TGIF2-C20orf24A0A0A6YYL0 155 aa6.57□□□□□ -1.36
CAPN1-225ENST00000533704 M0R143 59 aa6.57□□□□□ -1.36
CAPN1-225ENST00000533704 APOMO95445 188 aa6.57□□□□□ -1.36
CAPN1-225ENST00000533704 TRGC2P03986 189 aa6.57□□□□□ -1.36
CAPN1-225ENST00000533704 SPAG11BQ08648 103 aa6.57□□□□□ -1.36
CAPN1-225ENST00000533704 PDZD11Q5EBL8 140 aa6.57□□□□□ -1.36
CAPN1-225ENST00000533704 ANAPC16Q96DE5 110 aa6.57□□□□□ -1.36
CAPN1-225ENST00000533704 HIST1H2BLQ99880 126 aa6.57□□□□□ -1.36
CAPN1-225ENST00000533704 LINC00474Q9P2X8 69 aa6.57□□□□□ -1.36
CAPN1-225ENST00000533704 LOC107984640A0A0U1RRK4 108 aa6.56□□□□□ -1.36
CAPN1-225ENST00000533704 LINC00614P0C842 121 aa6.56□□□□□ -1.36
CAPN1-225ENST00000533704 IFI27P40305 119 aaPredicted RBP6.56□□□□□ -1.36
CAPN1-225ENST00000533704 RPL18AQ02543 176 aaKnown RBP6.56□□□□□ -1.36
CAPN1-225ENST00000533704 ORAOV1Q8WV07 137 aa6.56□□□□□ -1.36
CAPN1-225ENST00000533704 MAP1LC3AQ9H492 121 aa6.56□□□□□ -1.36
CAPN1-225ENST00000533704 A0A0J9YXV3 536 aa6.55□□□□□ -1.36
CAPN1-225ENST00000533704 MRPS36P82909 103 aaKnown RBP6.55□□□□□ -1.36
CAPN1-225ENST00000533704 COA6Q5JTJ3 125 aaKnown RBP6.55□□□□□ -1.36
CAPN1-225ENST00000533704 FAM104AQ969W3 186 aa6.55□□□□□ -1.36
CAPN1-225ENST00000533704 PTTG1IPP53801 180 aa6.54□□□□□ -1.36
CAPN1-225ENST00000533704 PRR3P79522 188 aaKnown RBP6.54□□□□□ -1.36
CAPN1-225ENST00000533704 C2orf48Q96LS8 159 aa6.54□□□□□ -1.36
CAPN1-225ENST00000533704 FAT3Q8TDW7 4589 aa6.54□□□□□ -1.36
CAPN1-225ENST00000533704 IGLV4-3A0A075B6K6 122 aa6.53□□□□□ -1.36
CAPN1-225ENST00000533704 SERTAD4-AS1Q5TG53 156 aa6.53□□□□□ -1.36
CAPN1-225ENST00000533704 Q8N8P6 123 aa6.53□□□□□ -1.36
CAPN1-225ENST00000533704 LAMTOR2Q9Y2Q5 125 aa6.53□□□□□ -1.36
CAPN1-225ENST00000533704 IGHV3OR16-9A0A0B4J2B5 98 aa6.52□□□□□ -1.37
CAPN1-225ENST00000533704 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.52□□□□□ -1.37
CAPN1-225ENST00000533704 DLEU1O43261 78 aa6.52□□□□□ -1.37
CAPN1-225ENST00000533704 G0S2P27469 103 aa6.52□□□□□ -1.37
CAPN1-225ENST00000533704 TMEM141Q96I45 108 aa6.52□□□□□ -1.37
CAPN1-225ENST00000533704 CYSLTR1Q9Y271 337 aa6.52□□□□□ -1.37
CAPN1-225ENST00000533704 A0A1W2PNN7 141 aa6.51□□□□□ -1.37
CAPN1-225ENST00000533704 NDUFA1O15239 70 aa6.51□□□□□ -1.37
CAPN1-225ENST00000533704 C9orf116Q5BN46 136 aaPredicted RBP6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms