RNA–Protein interactions for RNA: ENST00000526357.5

CTNND1-213, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,994 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-213ENST00000526357 LINC00575Q6W349 94 aa6.82□□□□□ -1.32
CTNND1-213ENST00000526357 C18orf65Q6ZTR6 163 aa6.82□□□□□ -1.32
CTNND1-213ENST00000526357 C11orf21Q9P2W6 132 aa6.82□□□□□ -1.32
CTNND1-213ENST00000526357 ZNF407Q9C0G0 2248 aa6.82□□□□□ -1.32
CTNND1-213ENST00000526357 HCG22E2RYF7 251 aa6.82□□□□□ -1.32
CTNND1-213ENST00000526357 Q8N3U1 123 aa6.82□□□□□ -1.32
CTNND1-213ENST00000526357 IGIPA6NJ69 53 aa6.82□□□□□ -1.32
CTNND1-213ENST00000526357 NCOR1O75376 2440 aa6.81□□□□□ -1.32
CTNND1-213ENST00000526357 WISP2O76076 250 aa6.81□□□□□ -1.32
CTNND1-213ENST00000526357 MALRD1Q5VYJ5 2156 aa6.81□□□□□ -1.32
CTNND1-213ENST00000526357 A0A087WVE0 104 aa6.81□□□□□ -1.32
CTNND1-213ENST00000526357 SMIM1B2RUZ4 78 aa6.81□□□□□ -1.32
CTNND1-213ENST00000526357 COL6A6A6NMZ7 2263 aa6.8□□□□□ -1.32
CTNND1-213ENST00000526357 YPEL4Q96NS1 127 aa6.8□□□□□ -1.32
CTNND1-213ENST00000526357 CACNA1BQ00975 2339 aa6.8□□□□□ -1.32
CTNND1-213ENST00000526357 DENND4AQ7Z401 1863 aa6.8□□□□□ -1.32
CTNND1-213ENST00000526357 C9orf116Q5BN46 136 aaPredicted RBP6.8□□□□□ -1.32
CTNND1-213ENST00000526357 A0A087WSZ3 146 aa6.8□□□□□ -1.32
CTNND1-213ENST00000526357 Q6ZPA2 131 aa6.79□□□□□ -1.32
CTNND1-213ENST00000526357 C7orf65Q6ZTY9 151 aa6.79□□□□□ -1.32
CTNND1-213ENST00000526357 SBSPONQ8IVN8 264 aa6.79□□□□□ -1.32
CTNND1-213ENST00000526357 C2orf48Q96LS8 159 aa6.79□□□□□ -1.32
CTNND1-213ENST00000526357 PRM2P04554 102 aa6.79□□□□□ -1.32
CTNND1-213ENST00000526357 CNFNQ9BYD5 112 aa6.79□□□□□ -1.32
CTNND1-213ENST00000526357 COX6A2Q02221 97 aa6.78□□□□□ -1.32
CTNND1-213ENST00000526357 C1orf134Q5TEV5 83 aa6.78□□□□□ -1.32
CTNND1-213ENST00000526357 LINC00337Q8N6G1 96 aa6.78□□□□□ -1.32
CTNND1-213ENST00000526357 TMEM254Q8TBM7 123 aa6.78□□□□□ -1.32
CTNND1-213ENST00000526357 SPTBN2O15020 2390 aa6.77□□□□□ -1.33
CTNND1-213ENST00000526357 A0A1B0GU69 56 aa6.77□□□□□ -1.33
CTNND1-213ENST00000526357 C1orf64Q8NEQ6 169 aa6.77□□□□□ -1.33
CTNND1-213ENST00000526357 OXLD1Q5BKU9 147 aa6.77□□□□□ -1.33
CTNND1-213ENST00000526357 PKDREJQ9NTG1 2253 aa6.77□□□□□ -1.33
CTNND1-213ENST00000526357 PRR3P79522 188 aaKnown RBP6.76□□□□□ -1.33
CTNND1-213ENST00000526357 LINC01561Q8N1V8 128 aa6.76□□□□□ -1.33
CTNND1-213ENST00000526357 ANAPC1Q9H1A4 1944 aa6.76□□□□□ -1.33
CTNND1-213ENST00000526357 PRLHP81277 87 aa6.76□□□□□ -1.33
CTNND1-213ENST00000526357 GAS8-AS1O95177 125 aa6.76□□□□□ -1.33
CTNND1-213ENST00000526357 SPAG11AQ6PDA7 123 aa6.76□□□□□ -1.33
CTNND1-213ENST00000526357 CRIP2P52943 208 aaPredicted RBP6.76□□□□□ -1.33
CTNND1-213ENST00000526357 DEFB116Q30KQ4 102 aa6.75□□□□□ -1.33
CTNND1-213ENST00000526357 SERTAD4-AS1Q5TG53 156 aa6.75□□□□□ -1.33
CTNND1-213ENST00000526357 WNK2Q9Y3S1 2297 aa6.75□□□□□ -1.33
CTNND1-213ENST00000526357 FHL2Q14192 279 aa6.75□□□□□ -1.33
CTNND1-213ENST00000526357 GTF3C1Q12789 2109 aa6.75□□□□□ -1.33
CTNND1-213ENST00000526357 CXCL6P80162 114 aa6.75□□□□□ -1.33
CTNND1-213ENST00000526357 IGLV4-60A0A075B6I1 120 aa6.75□□□□□ -1.33
CTNND1-213ENST00000526357 PLA2G1BP04054 148 aaKnown RBP6.75□□□□□ -1.33
CTNND1-213ENST00000526357 Q8N2B8 174 aa6.75□□□□□ -1.33
CTNND1-213ENST00000526357 MED13Q9UHV7 2174 aa6.74□□□□□ -1.33
CTNND1-213ENST00000526357 IGKV2D-30A0A075B6S6 120 aa6.74□□□□□ -1.33
CTNND1-213ENST00000526357 IGKV2-30P06310 120 aa6.74□□□□□ -1.33
CTNND1-213ENST00000526357 ACYP2P14621 99 aa6.74□□□□□ -1.33
CTNND1-213ENST00000526357 CRIP3Q6Q6R5 217 aa6.74□□□□□ -1.33
CTNND1-213ENST00000526357 PLXNB3Q9ULL4 1909 aa6.74□□□□□ -1.33
CTNND1-213ENST00000526357 PLA2G2AP14555 144 aa6.73□□□□□ -1.33
CTNND1-213ENST00000526357 AMELXQ99217 191 aa6.73□□□□□ -1.33
CTNND1-213ENST00000526357 TP53AIP1Q9HCN2 124 aa6.73□□□□□ -1.33
CTNND1-213ENST00000526357 ODF3L2Q3SX64 289 aa6.73□□□□□ -1.33
CTNND1-213ENST00000526357 Q6ZTC4 211 aa6.73□□□□□ -1.33
CTNND1-213ENST00000526357 A0A1B0GUV1 79 aa6.72□□□□□ -1.33
CTNND1-213ENST00000526357 IGLV1-51P01701 117 aa6.72□□□□□ -1.33
CTNND1-213ENST00000526357 ADAMTSL4-AS1Q5T5F5 129 aa6.72□□□□□ -1.33
CTNND1-213ENST00000526357 BRI3O95415 125 aa6.71□□□□□ -1.33
CTNND1-213ENST00000526357 TSPEAR-AS2P59090 65 aa6.71□□□□□ -1.33
CTNND1-213ENST00000526357 SMCR5Q8TEV8 140 aa6.71□□□□□ -1.33
CTNND1-213ENST00000526357 ADAMTS9Q9P2N4 1935 aa6.71□□□□□ -1.34
CTNND1-213ENST00000526357 DSCAML1Q8TD84 2053 aa6.71□□□□□ -1.34
CTNND1-213ENST00000526357 ZGRF1Q86YA3 2104 aa6.71□□□□□ -1.34
CTNND1-213ENST00000526357 DENND4CQ5VZ89 1909 aa6.7□□□□□ -1.34
CTNND1-213ENST00000526357 LYPD5Q6UWN5 251 aa6.7□□□□□ -1.34
CTNND1-213ENST00000526357 ACACAQ13085 2346 aa6.7□□□□□ -1.34
CTNND1-213ENST00000526357 VPREB1P12018 145 aa6.7□□□□□ -1.34
CTNND1-213ENST00000526357 C16orf95Q9H693 158 aa6.7□□□□□ -1.34
CTNND1-213ENST00000526357 ROS1P08922 2347 aa6.69□□□□□ -1.34
CTNND1-213ENST00000526357 PRO0628Q9UI54 55 aa6.69□□□□□ -1.34
CTNND1-213ENST00000526357 SMIM29Q86T20 159 aa6.69□□□□□ -1.34
CTNND1-213ENST00000526357 C22orf24Q9Y442 160 aa6.69□□□□□ -1.34
CTNND1-213ENST00000526357 LINC00846Q9NV44 126 aa6.68□□□□□ -1.34
CTNND1-213ENST00000526357 ZNF106Q9H2Y7 1883 aaKnown RBP6.68□□□□□ -1.34
CTNND1-213ENST00000526357 Q6ZRU5 148 aa6.68□□□□□ -1.34
CTNND1-213ENST00000526357 C6orf48Q9UBA6 75 aa6.68□□□□□ -1.34
CTNND1-213ENST00000526357 SPINT4Q6UDR6 99 aa6.67□□□□□ -1.34
CTNND1-213ENST00000526357 COL4A3Q01955 1670 aa6.67□□□□□ -1.34
CTNND1-213ENST00000526357 NHLRC4P0CG21 123 aaPredicted RBP6.67□□□□□ -1.34
CTNND1-213ENST00000526357 EDN2P20800 178 aa6.67□□□□□ -1.34
CTNND1-213ENST00000526357 Q9UF83 564 aa6.67□□□□□ -1.34
CTNND1-213ENST00000526357 KIF26AQ9ULI4 1882 aaPredicted RBP6.67□□□□□ -1.34
CTNND1-213ENST00000526357 URB1-AS1Q96HZ7 61 aa6.66□□□□□ -1.34
CTNND1-213ENST00000526357 BCE1O60756 84 aa6.66□□□□□ -1.34
CTNND1-213ENST00000526357 KIAA0087Q14695 138 aa6.66□□□□□ -1.34
CTNND1-213ENST00000526357 H3BPC8 53 aa6.65□□□□□ -1.34
CTNND1-213ENST00000526357 SPACA4Q8TDM5 124 aa6.65□□□□□ -1.34
CTNND1-213ENST00000526357 C8orf87E5RJ46 101 aa6.65□□□□□ -1.35
CTNND1-213ENST00000526357 SPTAN1Q13813 2472 aaKnown RBP6.65□□□□□ -1.35
CTNND1-213ENST00000526357 NCOA6Q14686 2063 aaPredicted RBP6.65□□□□□ -1.35
CTNND1-213ENST00000526357 A0A1B0GW54 56 aa6.64□□□□□ -1.35
CTNND1-213ENST00000526357 ARHGAP21Q5T5U3 1957 aa6.64□□□□□ -1.35
CTNND1-213ENST00000526357 CNOT1A5YKK6 2376 aaKnown RBP6.64□□□□□ -1.35
CTNND1-213ENST00000526357 LTBP2Q14767 1821 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms