RNA–Protein interactions for RNA: ENST00000521331.5

PRKDC-204, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-204ENST00000521331 NDUFA6P56556 154 aa9.21□□□□□ -0.94
PRKDC-204ENST00000521331 MRPL52Q86TS9 123 aaKnown RBP9.21□□□□□ -0.94
PRKDC-204ENST00000521331 ST20Q9HBF5 79 aa9.21□□□□□ -0.94
PRKDC-204ENST00000521331 LOC107984640A0A0U1RRK4 108 aa9.2□□□□□ -0.94
PRKDC-204ENST00000521331 TSHBP01222 138 aa9.2□□□□□ -0.94
PRKDC-204ENST00000521331 CAMPP49913 170 aa9.2□□□□□ -0.94
PRKDC-204ENST00000521331 CDC42SE2Q9NRR3 84 aa9.2□□□□□ -0.94
PRKDC-204ENST00000521331 A8MWL6 223 aa9.19□□□□□ -0.94
PRKDC-204ENST00000521331 TRGC2P03986 189 aa9.19□□□□□ -0.94
PRKDC-204ENST00000521331 ZNF664Q8N3J9 261 aa9.19□□□□□ -0.94
PRKDC-204ENST00000521331 LCE2BO14633 110 aa9.18□□□□□ -0.94
PRKDC-204ENST00000521331 MALP21145 153 aa9.18□□□□□ -0.94
PRKDC-204ENST00000521331 GAGE2BQ13066 116 aa9.18□□□□□ -0.94
PRKDC-204ENST00000521331 TMEM241Q24JQ0 296 aa9.18□□□□□ -0.94
PRKDC-204ENST00000521331 LBHQ53QV2 105 aaPredicted RBP9.18□□□□□ -0.94
PRKDC-204ENST00000521331 FAM231DQ6ZW35 169 aa9.18□□□□□ -0.94
PRKDC-204ENST00000521331 BORCS7Q96B45 105 aa9.18□□□□□ -0.94
PRKDC-204ENST00000521331 ANAPC16Q96DE5 110 aa9.18□□□□□ -0.94
PRKDC-204ENST00000521331 IMMP2LQ96T52 175 aa9.18□□□□□ -0.94
PRKDC-204ENST00000521331 TRBV27A0A0K0K1C4 114 aa9.17□□□□□ -0.94
PRKDC-204ENST00000521331 JOSD1Q15040 202 aaPredicted RBP9.17□□□□□ -0.94
PRKDC-204ENST00000521331 CT83Q5H943 113 aa9.17□□□□□ -0.94
PRKDC-204ENST00000521331 OR10D4PQ8NGN7 298 aa9.17□□□□□ -0.94
PRKDC-204ENST00000521331 HIST1H2BLQ99880 126 aa9.17□□□□□ -0.94
PRKDC-204ENST00000521331 IGLV4-69A0A075B6H9 119 aa9.16□□□□□ -0.94
PRKDC-204ENST00000521331 COX7A2LO14548 114 aa9.16□□□□□ -0.94
PRKDC-204ENST00000521331 GAS8-AS1O95177 125 aa9.16□□□□□ -0.94
PRKDC-204ENST00000521331 POLR2KP53803 58 aaKnown RBP9.16□□□□□ -0.94
PRKDC-204ENST00000521331 RPL23P62829 140 aaKnown RBP9.16□□□□□ -0.94
PRKDC-204ENST00000521331 A0A1W2PNN7 141 aa9.15□□□□□ -0.94
PRKDC-204ENST00000521331 APOMO95445 188 aa9.15□□□□□ -0.94
PRKDC-204ENST00000521331 SMAGPQ0VAQ4 97 aa9.15□□□□□ -0.94
PRKDC-204ENST00000521331 NUP35Q8NFH5 326 aa9.15□□□□□ -0.94
PRKDC-204ENST00000521331 CAMK2N2Q96S95 79 aa9.15□□□□□ -0.94
PRKDC-204ENST00000521331 SMIM7Q9BQ49 75 aa9.15□□□□□ -0.94
PRKDC-204ENST00000521331 TMEM191AQ9H0A3 160 aa9.15□□□□□ -0.94
PRKDC-204ENST00000521331 A0A1B0GUT8 65 aa9.14□□□□□ -0.95
PRKDC-204ENST00000521331 MT-ND6P03923 174 aa9.14□□□□□ -0.95
PRKDC-204ENST00000521331 C14orf144Q96I85 54 aa9.14□□□□□ -0.95
PRKDC-204ENST00000521331 C2orf48Q96LS8 159 aa9.14□□□□□ -0.95
PRKDC-204ENST00000521331 PSORS1C2Q9UIG4 136 aa9.14□□□□□ -0.95
PRKDC-204ENST00000521331 CSDC2Q9Y534 153 aaKnown RBP9.14□□□□□ -0.95
PRKDC-204ENST00000521331 FCER1GP30273 86 aa9.13□□□□□ -0.95
PRKDC-204ENST00000521331 C9orf116Q5BN46 136 aaPredicted RBP9.13□□□□□ -0.95
PRKDC-204ENST00000521331 PACRGQ96M98 296 aaPredicted RBP9.13□□□□□ -0.95
PRKDC-204ENST00000521331 TRAV9-1A0A075B6T8 112 aa9.12□□□□□ -0.95
PRKDC-204ENST00000521331 HIGD1CA8MV81 97 aa9.12□□□□□ -0.95
PRKDC-204ENST00000521331 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.12□□□□□ -0.95
PRKDC-204ENST00000521331 VCYO14598 125 aa9.12□□□□□ -0.95
PRKDC-204ENST00000521331 PPP1R17O96001 155 aa9.12□□□□□ -0.95
PRKDC-204ENST00000521331 RAB4AP20338 218 aa9.12□□□□□ -0.95
PRKDC-204ENST00000521331 DDTP30046 118 aa9.12□□□□□ -0.95
PRKDC-204ENST00000521331 CEBPGP53567 150 aa9.12□□□□□ -0.95
PRKDC-204ENST00000521331 RPL18AQ02543 176 aaKnown RBP9.12□□□□□ -0.95
PRKDC-204ENST00000521331 TSKUQ8WUA8 353 aa9.12□□□□□ -0.95
PRKDC-204ENST00000521331 C2orf88Q9BSF0 95 aa9.12□□□□□ -0.95
PRKDC-204ENST00000521331 TSTD3H0UI37 97 aa9.11□□□□□ -0.95
PRKDC-204ENST00000521331 RNF151Q2KHN1 245 aa9.11□□□□□ -0.95
PRKDC-204ENST00000521331 UBE2D4Q9Y2X8 147 aa9.11□□□□□ -0.95
PRKDC-204ENST00000521331 TRAV13-1A0A0B4J241 112 aa9.1□□□□□ -0.95
PRKDC-204ENST00000521331 FABP4P15090 132 aa9.1□□□□□ -0.95
PRKDC-204ENST00000521331 C1orf137Q5JT78 98 aa9.1□□□□□ -0.95
PRKDC-204ENST00000521331 AMN1Q8IY45 258 aa9.1□□□□□ -0.95
PRKDC-204ENST00000521331 KIR2DL4Q99706 377 aa9.1□□□□□ -0.95
PRKDC-204ENST00000521331 SUMO2P61956 95 aaKnown RBP9.09□□□□□ -0.95
PRKDC-204ENST00000521331 SPAG11BQ08648 103 aa9.09□□□□□ -0.95
PRKDC-204ENST00000521331 ADIRFQ15847 76 aa9.09□□□□□ -0.95
PRKDC-204ENST00000521331 C5orf38Q86SI9 138 aa9.09□□□□□ -0.95
PRKDC-204ENST00000521331 RNASE13Q5GAN3 156 aaKnown RBP9.08□□□□□ -0.96
PRKDC-204ENST00000521331 PHF5AQ7RTV0 110 aaKnown RBP9.08□□□□□ -0.96
PRKDC-204ENST00000521331 LINC01551Q86U37 167 aa9.08□□□□□ -0.96
PRKDC-204ENST00000521331 DIRC1Q969H9 104 aa9.08□□□□□ -0.96
PRKDC-204ENST00000521331 TMEM18Q96B42 140 aa9.08□□□□□ -0.96
PRKDC-204ENST00000521331 TIMM21Q9BVV7 248 aa9.08□□□□□ -0.96
PRKDC-204ENST00000521331 OSTCQ9NRP0 149 aa9.08□□□□□ -0.96
PRKDC-204ENST00000521331 F8WDY8 70 aa9.07□□□□□ -0.96
PRKDC-204ENST00000521331 SMKR1H3BMG3 65 aa9.07□□□□□ -0.96
PRKDC-204ENST00000521331 RIGQ13278 110 aa9.07□□□□□ -0.96
PRKDC-204ENST00000521331 Q6ZUT4 128 aa9.07□□□□□ -0.96
PRKDC-204ENST00000521331 NRACQ8N912 160 aa9.07□□□□□ -0.96
PRKDC-204ENST00000521331 OPRPNQ99935 248 aaPredicted RBP9.07□□□□□ -0.96
PRKDC-204ENST00000521331 MRPL35Q9NZE8 188 aaKnown RBP9.07□□□□□ -0.96
PRKDC-204ENST00000521331 IGLV7-43P04211 117 aa9.06□□□□□ -0.96
PRKDC-204ENST00000521331 PRR26Q8N8Z3 221 aa9.05□□□□□ -0.96
PRKDC-204ENST00000521331 LPAP08519 4548 aa9.04□□□□□ -0.96
PRKDC-204ENST00000521331 A0A087WZ39 114 aa9.04□□□□□ -0.96
PRKDC-204ENST00000521331 TCAPO15273 167 aa9.04□□□□□ -0.96
PRKDC-204ENST00000521331 ORAOV1Q8WV07 137 aa9.04□□□□□ -0.96
PRKDC-204ENST00000521331 H0Y9J4 135 aa9.03□□□□□ -0.96
PRKDC-204ENST00000521331 NDUFA1O15239 70 aa9.03□□□□□ -0.96
PRKDC-204ENST00000521331 PDZD11Q5EBL8 140 aa9.03□□□□□ -0.96
PRKDC-204ENST00000521331 C20orf78Q9BR46 151 aa9.03□□□□□ -0.96
PRKDC-204ENST00000521331 V9GYV3 84 aa9.03□□□□□ -0.96
PRKDC-204ENST00000521331 IGLV1-50A0A075B6I6 118 aa9.02□□□□□ -0.97
PRKDC-204ENST00000521331 TLX1NBP0CAT3 122 aa9.02□□□□□ -0.97
PRKDC-204ENST00000521331 RPL32P62910 135 aaKnown RBP9.02□□□□□ -0.97
PRKDC-204ENST00000521331 NAT8BQ9UHF3 227 aa9.02□□□□□ -0.97
PRKDC-204ENST00000521331 IGHV3OR16-9A0A0B4J2B5 98 aa9.01□□□□□ -0.97
PRKDC-204ENST00000521331 MRPL51Q4U2R6 128 aaKnown RBP9.01□□□□□ -0.97
PRKDC-204ENST00000521331 FAM104BQ5XKR9 115 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms