RNA–Protein interactions for RNA: ENST00000514934.1

SGCA-211, Transcript of sarcoglycan alpha, humanhuman

TSL 4

Gene SGCA, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-211ENST00000514934 TGIF2-C20orf24A0A0A6YYL0 155 aa9.2□□□□□ -0.94
SGCA-211ENST00000514934 IGHV1-58A0A0C4DH39 117 aa9.2□□□□□ -0.94
SGCA-211ENST00000514934 RNASE13Q5GAN3 156 aaKnown RBP9.2□□□□□ -0.94
SGCA-211ENST00000514934 TNFRSF6BO95407 300 aa9.19□□□□□ -0.94
SGCA-211ENST00000514934 NPYP01303 97 aa9.19□□□□□ -0.94
SGCA-211ENST00000514934 MRPL54Q6P161 138 aaKnown RBP9.19□□□□□ -0.94
SGCA-211ENST00000514934 SMIM2Q9BVW6 85 aa9.19□□□□□ -0.94
SGCA-211ENST00000514934 D6R8Y8 96 aa9.18□□□□□ -0.94
SGCA-211ENST00000514934 RPL39P62891 51 aaKnown RBP9.18□□□□□ -0.94
SGCA-211ENST00000514934 HBBP68871 147 aa9.18□□□□□ -0.94
SGCA-211ENST00000514934 PHOX2AO14813 284 aa9.17□□□□□ -0.94
SGCA-211ENST00000514934 TRGC2P03986 189 aa9.17□□□□□ -0.94
SGCA-211ENST00000514934 FCER1GP30273 86 aa9.17□□□□□ -0.94
SGCA-211ENST00000514934 NDUFA6P56556 154 aa9.17□□□□□ -0.94
SGCA-211ENST00000514934 SS18Q15532 418 aa9.17□□□□□ -0.94
SGCA-211ENST00000514934 KIR2DL4Q99706 377 aa9.17□□□□□ -0.94
SGCA-211ENST00000514934 IGKV2-24A0A0C4DH68 120 aa9.16□□□□□ -0.94
SGCA-211ENST00000514934 HIST1H2BKO60814 126 aa9.16□□□□□ -0.94
SGCA-211ENST00000514934 HIST1H2BJP06899 126 aa9.16□□□□□ -0.94
SGCA-211ENST00000514934 HIST1H2BOP23527 126 aa9.16□□□□□ -0.94
SGCA-211ENST00000514934 S100A2P29034 98 aa9.16□□□□□ -0.94
SGCA-211ENST00000514934 CKS2P33552 79 aa9.16□□□□□ -0.94
SGCA-211ENST00000514934 HIST1H2BBP33778 126 aa9.16□□□□□ -0.94
SGCA-211ENST00000514934 HIST1H2BDP58876 126 aa9.16□□□□□ -0.94
SGCA-211ENST00000514934 HIST1H2BCP62807 126 aa9.16□□□□□ -0.94
SGCA-211ENST00000514934 HIST2H2BEQ16778 126 aa9.16□□□□□ -0.94
SGCA-211ENST00000514934 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.16□□□□□ -0.94
SGCA-211ENST00000514934 HIST1H2BHQ93079 126 aa9.16□□□□□ -0.94
SGCA-211ENST00000514934 CARD19Q96LW7 228 aa9.16□□□□□ -0.94
SGCA-211ENST00000514934 HIST1H2BNQ99877 126 aa9.16□□□□□ -0.94
SGCA-211ENST00000514934 HIST1H2BMQ99879 126 aa9.16□□□□□ -0.94
SGCA-211ENST00000514934 MAJINQ3KP22 176 aa9.15□□□□□ -0.94
SGCA-211ENST00000514934 OPRPNQ99935 248 aaPredicted RBP9.15□□□□□ -0.94
SGCA-211ENST00000514934 IGLV4-69A0A075B6H9 119 aa9.14□□□□□ -0.95
SGCA-211ENST00000514934 IGHV3OR16-9A0A0B4J2B5 98 aa9.14□□□□□ -0.95
SGCA-211ENST00000514934 PRR3P79522 188 aaKnown RBP9.14□□□□□ -0.95
SGCA-211ENST00000514934 MRPS36P82909 103 aaKnown RBP9.14□□□□□ -0.95
SGCA-211ENST00000514934 SYCNQ0VAF6 134 aa9.14□□□□□ -0.95
SGCA-211ENST00000514934 COA6Q5JTJ3 125 aaKnown RBP9.14□□□□□ -0.95
SGCA-211ENST00000514934 Q6ZRU5 148 aa9.14□□□□□ -0.95
SGCA-211ENST00000514934 STPG4Q8N801 248 aa9.14□□□□□ -0.95
SGCA-211ENST00000514934 TRAPPC1Q9Y5R8 145 aa9.14□□□□□ -0.95
SGCA-211ENST00000514934 TRAV13-1A0A0B4J241 112 aa9.13□□□□□ -0.95
SGCA-211ENST00000514934 PRSS47A8MTI9 375 aa9.13□□□□□ -0.95
SGCA-211ENST00000514934 COX7A2LO14548 114 aa9.13□□□□□ -0.95
SGCA-211ENST00000514934 PPBPP02775 128 aa9.13□□□□□ -0.95
SGCA-211ENST00000514934 TCAPO15273 167 aa9.12□□□□□ -0.95
SGCA-211ENST00000514934 PTTG1IPP53801 180 aa9.12□□□□□ -0.95
SGCA-211ENST00000514934 HIST3H2BBQ8N257 126 aa9.12□□□□□ -0.95
SGCA-211ENST00000514934 SPANXA1Q9NS26 97 aa9.12□□□□□ -0.95
SGCA-211ENST00000514934 C5orf38Q86SI9 138 aa9.11□□□□□ -0.95
SGCA-211ENST00000514934 ORMDL3Q8N138 153 aa9.11□□□□□ -0.95
SGCA-211ENST00000514934 C2orf48Q96LS8 159 aa9.11□□□□□ -0.95
SGCA-211ENST00000514934 PCP4L1A6NKN8 68 aa9.1□□□□□ -0.95
SGCA-211ENST00000514934 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.1□□□□□ -0.95
SGCA-211ENST00000514934 ZNF561-AS1K7EIQ3 104 aa9.1□□□□□ -0.95
SGCA-211ENST00000514934 SMAGPQ0VAQ4 97 aa9.1□□□□□ -0.95
SGCA-211ENST00000514934 TMEM136Q6ZRR5 245 aa9.1□□□□□ -0.95
SGCA-211ENST00000514934 PRELID3AQ96N28 172 aa9.1□□□□□ -0.95
SGCA-211ENST00000514934 MRPL18Q9H0U6 180 aaKnown RBP9.1□□□□□ -0.95
SGCA-211ENST00000514934 LRP2P98164 4655 aa9.1□□□□□ -0.95
SGCA-211ENST00000514934 A0A1W2PNN7 141 aa9.09□□□□□ -0.95
SGCA-211ENST00000514934 SERTAD4-AS1Q5TG53 156 aa9.09□□□□□ -0.95
SGCA-211ENST00000514934 TMEM18Q96B42 140 aa9.09□□□□□ -0.95
SGCA-211ENST00000514934 DPH3Q96FX2 82 aa9.09□□□□□ -0.95
SGCA-211ENST00000514934 LINC00474Q9P2X8 69 aa9.09□□□□□ -0.95
SGCA-211ENST00000514934 PYGO1Q9Y3Y4 419 aa9.09□□□□□ -0.95
SGCA-211ENST00000514934 IGLV4-3A0A075B6K6 122 aa9.08□□□□□ -0.96
SGCA-211ENST00000514934 LINC00173Q6ZV60 143 aa9.08□□□□□ -0.96
SGCA-211ENST00000514934 C7orf33Q8WU49 177 aa9.08□□□□□ -0.96
SGCA-211ENST00000514934 PACRGQ96M98 296 aaPredicted RBP9.08□□□□□ -0.96
SGCA-211ENST00000514934 LOC107984640A0A0U1RRK4 108 aa9.07□□□□□ -0.96
SGCA-211ENST00000514934 IFITM10A6NMD0 228 aa9.07□□□□□ -0.96
SGCA-211ENST00000514934 APOMO95445 188 aa9.07□□□□□ -0.96
SGCA-211ENST00000514934 SRSF9Q13242 221 aaKnown RBP eCLIP9.07□□□□□ -0.96
SGCA-211ENST00000514934 KIAA0087Q14695 138 aa9.07□□□□□ -0.96
SGCA-211ENST00000514934 C10orf25Q5T742 122 aa9.07□□□□□ -0.96
SGCA-211ENST00000514934 OR10D4PQ8NGN7 298 aa9.07□□□□□ -0.96
SGCA-211ENST00000514934 MALP21145 153 aa9.06□□□□□ -0.96
SGCA-211ENST00000514934 SPAG11BQ08648 103 aa9.06□□□□□ -0.96
SGCA-211ENST00000514934 RNF151Q2KHN1 245 aa9.06□□□□□ -0.96
SGCA-211ENST00000514934 LINC00242Q5T6M2 205 aa9.06□□□□□ -0.96
SGCA-211ENST00000514934 CAMK2N2Q96S95 79 aa9.06□□□□□ -0.96
SGCA-211ENST00000514934 LAMTOR2Q9Y2Q5 125 aa9.06□□□□□ -0.96
SGCA-211ENST00000514934 A0A0J9YXV3 536 aa9.05□□□□□ -0.96
SGCA-211ENST00000514934 MRPL35Q9NZE8 188 aaKnown RBP9.05□□□□□ -0.96
SGCA-211ENST00000514934 PKIGQ9Y2B9 76 aa9.05□□□□□ -0.96
SGCA-211ENST00000514934 FABP4P15090 132 aa9.04□□□□□ -0.96
SGCA-211ENST00000514934 GAGE2BQ13066 116 aa9.04□□□□□ -0.96
SGCA-211ENST00000514934 PYY3Q5JQD4 70 aa9.04□□□□□ -0.96
SGCA-211ENST00000514934 KRTAP7-1Q8IUC3 87 aa9.04□□□□□ -0.96
SGCA-211ENST00000514934 Q8N8P6 123 aa9.04□□□□□ -0.96
SGCA-211ENST00000514934 ORAOV1Q8WV07 137 aa9.04□□□□□ -0.96
SGCA-211ENST00000514934 LINC01600Q96MT4 127 aa9.04□□□□□ -0.96
SGCA-211ENST00000514934 AMELXQ99217 191 aa9.04□□□□□ -0.96
SGCA-211ENST00000514934 HIST1H2BLQ99880 126 aa9.04□□□□□ -0.96
SGCA-211ENST00000514934 A0A087WZ39 114 aa9.03□□□□□ -0.96
SGCA-211ENST00000514934 IGIPA6NJ69 53 aa9.03□□□□□ -0.96
SGCA-211ENST00000514934 UBE2D1P51668 147 aa9.03□□□□□ -0.96
SGCA-211ENST00000514934 ZC2HC1BQ5TFG8 222 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms