RNA–Protein interactions for RNA: ENST00000508818.5

UBE2D3-227, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-227ENST00000508818 HBBP68871 147 aa6.34□□□□□ -1.39
UBE2D3-227ENST00000508818 SRSF3P84103 164 aaKnown RBP6.34□□□□□ -1.39
UBE2D3-227ENST00000508818 C5orf38Q86SI9 138 aa6.34□□□□□ -1.39
UBE2D3-227ENST00000508818 D6R8Y8 96 aa6.33□□□□□ -1.4
UBE2D3-227ENST00000508818 RAB5AP20339 215 aa6.33□□□□□ -1.4
UBE2D3-227ENST00000508818 RPL32P62910 135 aaKnown RBP6.33□□□□□ -1.4
UBE2D3-227ENST00000508818 PRR3P79522 188 aaKnown RBP6.33□□□□□ -1.4
UBE2D3-227ENST00000508818 PPBPP02775 128 aa6.32□□□□□ -1.4
UBE2D3-227ENST00000508818 PTTG1IPP53801 180 aa6.32□□□□□ -1.4
UBE2D3-227ENST00000508818 Q6ZUT4 128 aa6.32□□□□□ -1.4
UBE2D3-227ENST00000508818 C2orf48Q96LS8 159 aa6.32□□□□□ -1.4
UBE2D3-227ENST00000508818 SMIM2Q9BVW6 85 aa6.32□□□□□ -1.4
UBE2D3-227ENST00000508818 SPANXA1Q9NS26 97 aa6.32□□□□□ -1.4
UBE2D3-227ENST00000508818 FAT3Q8TDW7 4589 aa6.31□□□□□ -1.4
UBE2D3-227ENST00000508818 KRTAP4-8A0A0G2JLE6 195 aa6.31□□□□□ -1.4
UBE2D3-227ENST00000508818 RPL39P62891 51 aaKnown RBP6.31□□□□□ -1.4
UBE2D3-227ENST00000508818 RPL18AQ02543 176 aaKnown RBP6.31□□□□□ -1.4
UBE2D3-227ENST00000508818 SPAG11BQ08648 103 aa6.31□□□□□ -1.4
UBE2D3-227ENST00000508818 REG3GQ6UW15 175 aa6.31□□□□□ -1.4
UBE2D3-227ENST00000508818 Q6ZRP5 223 aa6.31□□□□□ -1.4
UBE2D3-227ENST00000508818 ORMDL3Q8N138 153 aa6.31□□□□□ -1.4
UBE2D3-227ENST00000508818 IFITM10A6NMD0 228 aa6.3□□□□□ -1.4
UBE2D3-227ENST00000508818 NPYP01303 97 aa6.3□□□□□ -1.4
UBE2D3-227ENST00000508818 MT1HL1P0DM35 61 aa6.3□□□□□ -1.4
UBE2D3-227ENST00000508818 SPINK6Q6UWN8 80 aa6.3□□□□□ -1.4
UBE2D3-227ENST00000508818 TMEM136Q6ZRR5 245 aa6.3□□□□□ -1.4
UBE2D3-227ENST00000508818 ATP5L2Q7Z4Y8 100 aa6.3□□□□□ -1.4
UBE2D3-227ENST00000508818 OR10D4PQ8NGN7 298 aa6.3□□□□□ -1.4
UBE2D3-227ENST00000508818 ORAOV1Q8WV07 137 aa6.3□□□□□ -1.4
UBE2D3-227ENST00000508818 PKHD1L1Q86WI1 4243 aa6.29□□□□□ -1.4
UBE2D3-227ENST00000508818 TGIF2-C20orf24A0A0A6YYL0 155 aa6.29□□□□□ -1.4
UBE2D3-227ENST00000508818 A0A1B0GXF2 115 aa6.29□□□□□ -1.4
UBE2D3-227ENST00000508818 IFI27P40305 119 aaPredicted RBP6.29□□□□□ -1.4
UBE2D3-227ENST00000508818 RAB14P61106 215 aa6.29□□□□□ -1.4
UBE2D3-227ENST00000508818 MRPS36P82909 103 aaKnown RBP6.29□□□□□ -1.4
UBE2D3-227ENST00000508818 PRELID3AQ96N28 172 aa6.29□□□□□ -1.4
UBE2D3-227ENST00000508818 IMMP2LQ96T52 175 aa6.29□□□□□ -1.4
UBE2D3-227ENST00000508818 OPRPNQ99935 248 aaPredicted RBP6.29□□□□□ -1.4
UBE2D3-227ENST00000508818 A0A0J9YXV3 536 aa6.28□□□□□ -1.4
UBE2D3-227ENST00000508818 F8WDY8 70 aa6.28□□□□□ -1.4
UBE2D3-227ENST00000508818 NDUFA1O15239 70 aa6.28□□□□□ -1.4
UBE2D3-227ENST00000508818 MT-ND4LP03901 98 aa6.28□□□□□ -1.4
UBE2D3-227ENST00000508818 MT-ND6P03923 174 aa6.28□□□□□ -1.4
UBE2D3-227ENST00000508818 RNF151Q2KHN1 245 aa6.28□□□□□ -1.4
UBE2D3-227ENST00000508818 LINC01600Q96MT4 127 aa6.28□□□□□ -1.4
UBE2D3-227ENST00000508818 LOC389332A0A1B0GUA5 103 aa6.27□□□□□ -1.41
UBE2D3-227ENST00000508818 A0A1W2PNN7 141 aa6.27□□□□□ -1.41
UBE2D3-227ENST00000508818 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.27□□□□□ -1.41
UBE2D3-227ENST00000508818 C9orf116Q5BN46 136 aaPredicted RBP6.27□□□□□ -1.41
UBE2D3-227ENST00000508818 MAP1LC3AQ9H492 121 aa6.27□□□□□ -1.41
UBE2D3-227ENST00000508818 IGHV3OR16-9A0A0B4J2B5 98 aa6.26□□□□□ -1.41
UBE2D3-227ENST00000508818 PNRC1Q12796 327 aaPredicted RBP6.26□□□□□ -1.41
UBE2D3-227ENST00000508818 ANAPC16Q96DE5 110 aa6.26□□□□□ -1.41
UBE2D3-227ENST00000508818 MRPL35Q9NZE8 188 aaKnown RBP6.26□□□□□ -1.41
UBE2D3-227ENST00000508818 LAMTOR2Q9Y2Q5 125 aa6.26□□□□□ -1.41
UBE2D3-227ENST00000508818 HMCN2Q8NDA2 5059 aa6.26□□□□□ -1.41
UBE2D3-227ENST00000508818 Q6ZN92 141 aa6.25□□□□□ -1.41
UBE2D3-227ENST00000508818 TEX43Q6ZNM6 134 aa6.25□□□□□ -1.41
UBE2D3-227ENST00000508818 TMEM141Q96I45 108 aa6.25□□□□□ -1.41
UBE2D3-227ENST00000508818 C2orf88Q9BSF0 95 aa6.25□□□□□ -1.41
UBE2D3-227ENST00000508818 PYGO1Q9Y3Y4 419 aa6.25□□□□□ -1.41
UBE2D3-227ENST00000508818 SRSF9Q13242 221 aaKnown RBP eCLIP6.24□□□□□ -1.41
UBE2D3-227ENST00000508818 GAGE2EQ4V326 116 aa6.24□□□□□ -1.41
UBE2D3-227ENST00000508818 C1orf137Q5JT78 98 aa6.24□□□□□ -1.41
UBE2D3-227ENST00000508818 UNQ6190/PRO20217Q6UXQ8 127 aa6.24□□□□□ -1.41
UBE2D3-227ENST00000508818 PHF5AQ7RTV0 110 aaKnown RBP6.24□□□□□ -1.41
UBE2D3-227ENST00000508818 Q8N8P6 123 aa6.24□□□□□ -1.41
UBE2D3-227ENST00000508818 FAM104AQ969W3 186 aa6.24□□□□□ -1.41
UBE2D3-227ENST00000508818 VCX2Q9H322 139 aa6.24□□□□□ -1.41
UBE2D3-227ENST00000508818 GAGE2DQ9UEU5 116 aa6.24□□□□□ -1.41
UBE2D3-227ENST00000508818 PSORS1C2Q9UIG4 136 aa6.24□□□□□ -1.41
UBE2D3-227ENST00000508818 CYSLTR1Q9Y271 337 aa6.24□□□□□ -1.41
UBE2D3-227ENST00000508818 IGLV4-3A0A075B6K6 122 aa6.23□□□□□ -1.41
UBE2D3-227ENST00000508818 A0A087WZ39 114 aa6.23□□□□□ -1.41
UBE2D3-227ENST00000508818 ORMDL2Q53FV1 153 aa6.23□□□□□ -1.41
UBE2D3-227ENST00000508818 LINC00242Q5T6M2 205 aa6.23□□□□□ -1.41
UBE2D3-227ENST00000508818 C10orf25Q5T742 122 aa6.23□□□□□ -1.41
UBE2D3-227ENST00000508818 PACRGQ96M98 296 aaPredicted RBP6.23□□□□□ -1.41
UBE2D3-227ENST00000508818 CTDSP1Q9GZU7 261 aa6.23□□□□□ -1.41
UBE2D3-227ENST00000508818 PRSS47A8MTI9 375 aa6.22□□□□□ -1.41
UBE2D3-227ENST00000508818 PRSS2P07478 247 aa6.22□□□□□ -1.41
UBE2D3-227ENST00000508818 G0S2P27469 103 aa6.22□□□□□ -1.41
UBE2D3-227ENST00000508818 C2orf66Q6UXQ4 117 aa6.22□□□□□ -1.41
UBE2D3-227ENST00000508818 FAM19A5Q7Z5A7 132 aaPredicted RBP6.22□□□□□ -1.41
UBE2D3-227ENST00000508818 C6orf48Q9UBA6 75 aa6.22□□□□□ -1.41
UBE2D3-227ENST00000508818 K7EMI3 77 aa6.21□□□□□ -1.42
UBE2D3-227ENST00000508818 TLX1NBP0CAT3 122 aa6.21□□□□□ -1.42
UBE2D3-227ENST00000508818 KRTAP10-8P60410 259 aa6.21□□□□□ -1.42
UBE2D3-227ENST00000508818 PAPPA-AS1Q5QFB9 102 aa6.21□□□□□ -1.42
UBE2D3-227ENST00000508818 NXT2Q9NPJ8 142 aaKnown RBP6.21□□□□□ -1.42
UBE2D3-227ENST00000508818 TRBV30A0A0K0K1B3 111 aa6.2□□□□□ -1.42
UBE2D3-227ENST00000508818 FAM168BA1KXE4 195 aa6.2□□□□□ -1.42
UBE2D3-227ENST00000508818 UBE2D1P51668 147 aa6.2□□□□□ -1.42
UBE2D3-227ENST00000508818 CKS1BP61024 79 aa6.2□□□□□ -1.42
UBE2D3-227ENST00000508818 UBE2BP63146 152 aa6.2□□□□□ -1.42
UBE2D3-227ENST00000508818 C6orf226Q5I0X4 101 aa6.2□□□□□ -1.42
UBE2D3-227ENST00000508818 C2orf82Q6UX34 121 aa6.2□□□□□ -1.42
UBE2D3-227ENST00000508818 LINC01561Q8N1V8 128 aa6.2□□□□□ -1.42
UBE2D3-227ENST00000508818 DIRC1Q969H9 104 aa6.2□□□□□ -1.42
UBE2D3-227ENST00000508818 TOMM7Q9P0U1 55 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms