RNA–Protein interactions for RNA: ENST00000504224.5

RNF4-205, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-205ENST00000504224 UBE2D4Q9Y2X8 147 aa13.54□□□□□ -0.24
RNF4-205ENST00000504224 CSDC2Q9Y534 153 aaKnown RBP13.54□□□□□ -0.24
RNF4-205ENST00000504224 NPYP01303 97 aa13.53□□□□□ -0.24
RNF4-205ENST00000504224 MT-ND6P03923 174 aa13.53□□□□□ -0.24
RNF4-205ENST00000504224 GVQW2A0A096LPI5 108 aaPredicted RBP13.52□□□□□ -0.25
RNF4-205ENST00000504224 IGHV1-58A0A0C4DH39 117 aa13.51□□□□□ -0.25
RNF4-205ENST00000504224 C1orf196B1AJZ1 125 aa13.51□□□□□ -0.25
RNF4-205ENST00000504224 CD164L2Q6UWJ8 174 aa13.51□□□□□ -0.25
RNF4-205ENST00000504224 PRELID3AQ96N28 172 aa13.51□□□□□ -0.25
RNF4-205ENST00000504224 TIMM21Q9BVV7 248 aa13.51□□□□□ -0.25
RNF4-205ENST00000504224 PRR3P79522 188 aaKnown RBP13.5□□□□□ -0.25
RNF4-205ENST00000504224 RNASE13Q5GAN3 156 aaKnown RBP13.5□□□□□ -0.25
RNF4-205ENST00000504224 A0A096LNI7 61 aa13.49□□□□□ -0.25
RNF4-205ENST00000504224 RAB5AP20339 215 aa13.49□□□□□ -0.25
RNF4-205ENST00000504224 Q6ZUT4 128 aa13.49□□□□□ -0.25
RNF4-205ENST00000504224 MRPL18Q9H0U6 180 aaKnown RBP13.49□□□□□ -0.25
RNF4-205ENST00000504224 TRAV13-1A0A0B4J241 112 aa13.48□□□□□ -0.25
RNF4-205ENST00000504224 MALP21145 153 aa13.48□□□□□ -0.25
RNF4-205ENST00000504224 LAMTOR2Q9Y2Q5 125 aa13.48□□□□□ -0.25
RNF4-205ENST00000504224 TRAPPC1Q9Y5R8 145 aa13.48□□□□□ -0.25
RNF4-205ENST00000504224 RPL39P62891 51 aaKnown RBP13.47□□□□□ -0.25
RNF4-205ENST00000504224 LINC00526Q96FQ7 95 aa13.47□□□□□ -0.25
RNF4-205ENST00000504224 SPANXA1Q9NS26 97 aa13.47□□□□□ -0.25
RNF4-205ENST00000504224 PKIGQ9Y2B9 76 aa13.47□□□□□ -0.25
RNF4-205ENST00000504224 ZNF561-AS1K7EIQ3 104 aa13.46□□□□□ -0.25
RNF4-205ENST00000504224 COX7A2LO14548 114 aa13.46□□□□□ -0.25
RNF4-205ENST00000504224 MAP1LC3AQ9H492 121 aa13.46□□□□□ -0.25
RNF4-205ENST00000504224 FABP9Q0Z7S8 132 aa13.45□□□□□ -0.26
RNF4-205ENST00000504224 CARD19Q96LW7 228 aa13.45□□□□□ -0.26
RNF4-205ENST00000504224 LINC01600Q96MT4 127 aa13.45□□□□□ -0.26
RNF4-205ENST00000504224 LINC00474Q9P2X8 69 aa13.45□□□□□ -0.26
RNF4-205ENST00000504224 KIAA1644Q3SXP7 199 aa13.44□□□□□ -0.26
RNF4-205ENST00000504224 IFI27P40305 119 aaPredicted RBP13.43□□□□□ -0.26
RNF4-205ENST00000504224 LOC389332A0A1B0GUA5 103 aa13.42□□□□□ -0.26
RNF4-205ENST00000504224 ODF1Q14990 250 aa13.42□□□□□ -0.26
RNF4-205ENST00000504224 TNXBP22105 4242 aa13.42□□□□□ -0.26
RNF4-205ENST00000504224 IFITM10A6NMD0 228 aa13.41□□□□□ -0.26
RNF4-205ENST00000504224 APOMO95445 188 aa13.41□□□□□ -0.26
RNF4-205ENST00000504224 TRGC2P03986 189 aa13.41□□□□□ -0.26
RNF4-205ENST00000504224 ALKBH7Q9BT30 221 aaPredicted RBP13.41□□□□□ -0.26
RNF4-205ENST00000504224 MRPS36P82909 103 aaKnown RBP13.4□□□□□ -0.26
RNF4-205ENST00000504224 PRSS47A8MTI9 375 aa13.39□□□□□ -0.27
RNF4-205ENST00000504224 SYCNQ0VAF6 134 aa13.39□□□□□ -0.27
RNF4-205ENST00000504224 REG3GQ6UW15 175 aa13.39□□□□□ -0.27
RNF4-205ENST00000504224 SPINK6Q6UWN8 80 aa13.39□□□□□ -0.27
RNF4-205ENST00000504224 C5orf38Q86SI9 138 aa13.38□□□□□ -0.27
RNF4-205ENST00000504224 A0A0J9YXV3 536 aa13.37□□□□□ -0.27
RNF4-205ENST00000504224 Q6ZRP5 223 aa13.37□□□□□ -0.27
RNF4-205ENST00000504224 Q8N8P6 123 aa13.37□□□□□ -0.27
RNF4-205ENST00000504224 OPRPNQ99935 248 aaPredicted RBP13.37□□□□□ -0.27
RNF4-205ENST00000504224 IGLV4-69A0A075B6H9 119 aa13.36□□□□□ -0.27
RNF4-205ENST00000504224 GAGE2BQ13066 116 aa13.36□□□□□ -0.27
RNF4-205ENST00000504224 ORMDL2Q53FV1 153 aa13.36□□□□□ -0.27
RNF4-205ENST00000504224 CAMK2N2Q96S95 79 aa13.36□□□□□ -0.27
RNF4-205ENST00000504224 CYSLTR1Q9Y271 337 aa13.36□□□□□ -0.27
RNF4-205ENST00000504224 PYGO1Q9Y3Y4 419 aa13.36□□□□□ -0.27
RNF4-205ENST00000504224 TMEM141Q96I45 108 aa13.35□□□□□ -0.27
RNF4-205ENST00000504224 NXT2Q9NPJ8 142 aaKnown RBP13.35□□□□□ -0.27
RNF4-205ENST00000504224 K7EMI3 77 aa13.34□□□□□ -0.27
RNF4-205ENST00000504224 SPAG11BQ08648 103 aa13.34□□□□□ -0.27
RNF4-205ENST00000504224 Q6ZN92 141 aa13.34□□□□□ -0.27
RNF4-205ENST00000504224 LOC107984640A0A0U1RRK4 108 aa13.33□□□□□ -0.28
RNF4-205ENST00000504224 PTTG1IPP53801 180 aa13.33□□□□□ -0.28
RNF4-205ENST00000504224 C2orf66Q6UXQ4 117 aa13.33□□□□□ -0.28
RNF4-205ENST00000504224 TEX43Q6ZNM6 134 aa13.33□□□□□ -0.28
RNF4-205ENST00000504224 OR10D4PQ8NGN7 298 aa13.33□□□□□ -0.28
RNF4-205ENST00000504224 C18orf32Q8TCD1 76 aa13.33□□□□□ -0.28
RNF4-205ENST00000504224 FAM104AQ969W3 186 aa13.33□□□□□ -0.28
RNF4-205ENST00000504224 C2orf88Q9BSF0 95 aa13.33□□□□□ -0.28
RNF4-205ENST00000504224 IGLV4-3A0A075B6K6 122 aa13.32□□□□□ -0.28
RNF4-205ENST00000504224 KRTAP10-8P60410 259 aa13.32□□□□□ -0.28
RNF4-205ENST00000504224 ORAOV1Q8WV07 137 aa13.32□□□□□ -0.28
RNF4-205ENST00000504224 C2orf48Q96LS8 159 aa13.32□□□□□ -0.28
RNF4-205ENST00000504224 LRP2P98164 4655 aa13.31□□□□□ -0.28
RNF4-205ENST00000504224 SRSF9Q13242 221 aaKnown RBP eCLIP13.31□□□□□ -0.28
RNF4-205ENST00000504224 IGHV3OR16-9A0A0B4J2B5 98 aa13.3□□□□□ -0.28
RNF4-205ENST00000504224 G0S2P27469 103 aa13.3□□□□□ -0.28
RNF4-205ENST00000504224 LINC01546A6NGU7 62 aa13.28□□□□□ -0.28
RNF4-205ENST00000504224 A0A1W2PNN7 141 aa13.27□□□□□ -0.29
RNF4-205ENST00000504224 HIST1H2BKO60814 126 aa13.27□□□□□ -0.29
RNF4-205ENST00000504224 HIST1H2BJP06899 126 aa13.27□□□□□ -0.29
RNF4-205ENST00000504224 HIST1H2BOP23527 126 aa13.27□□□□□ -0.29
RNF4-205ENST00000504224 HIST1H2BBP33778 126 aa13.27□□□□□ -0.29
RNF4-205ENST00000504224 HIST1H2BDP58876 126 aa13.27□□□□□ -0.29
RNF4-205ENST00000504224 HIST1H2BCP62807 126 aa13.27□□□□□ -0.29
RNF4-205ENST00000504224 HIST2H2BEQ16778 126 aa13.27□□□□□ -0.29
RNF4-205ENST00000504224 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.27□□□□□ -0.29
RNF4-205ENST00000504224 HIST1H2BHQ93079 126 aa13.27□□□□□ -0.29
RNF4-205ENST00000504224 HIST1H2BNQ99877 126 aa13.27□□□□□ -0.29
RNF4-205ENST00000504224 HIST1H2BMQ99879 126 aa13.27□□□□□ -0.29
RNF4-205ENST00000504224 VCX2Q9H322 139 aa13.27□□□□□ -0.29
RNF4-205ENST00000504224 F8WDY8 70 aa13.26□□□□□ -0.29
RNF4-205ENST00000504224 NPSP0C0P6 89 aa13.26□□□□□ -0.29
RNF4-205ENST00000504224 RPL18AQ02543 176 aaKnown RBP13.26□□□□□ -0.29
RNF4-205ENST00000504224 PAPPA-AS1Q5QFB9 102 aa13.26□□□□□ -0.29
RNF4-205ENST00000504224 URB1-AS1Q96HZ7 61 aa13.26□□□□□ -0.29
RNF4-205ENST00000504224 NDUFA1O15239 70 aa13.25□□□□□ -0.29
RNF4-205ENST00000504224 C9orf116Q5BN46 136 aaPredicted RBP13.25□□□□□ -0.29
RNF4-205ENST00000504224 LINC00242Q5T6M2 205 aa13.25□□□□□ -0.29
RNF4-205ENST00000504224 A0A087WZ39 114 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms