RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 LECT2O14960 151 aa1.24□□□□□ -2.21
HMGB3P17-201ENST00000504195 IGLV1-47P01700 117 aa1.24□□□□□ -2.21
HMGB3P17-201ENST00000504195 IGLV2-23P01705 113 aa1.24□□□□□ -2.21
HMGB3P17-201ENST00000504195 IGHV1-46P01743 117 aa1.24□□□□□ -2.21
HMGB3P17-201ENST00000504195 IGHV1-8P0DP01 117 aa1.24□□□□□ -2.21
HMGB3P17-201ENST00000504195 SPINT3P49223 89 aa1.24□□□□□ -2.21
HMGB3P17-201ENST00000504195 CNBPP62633 177 aaKnown RBP1.24□□□□□ -2.21
HMGB3P17-201ENST00000504195 REG3AQ06141 175 aa1.24□□□□□ -2.21
HMGB3P17-201ENST00000504195 RNASE13Q5GAN3 156 aaKnown RBP1.24□□□□□ -2.21
HMGB3P17-201ENST00000504195 KPRPQ5T749 579 aaPredicted RBP1.24□□□□□ -2.21
HMGB3P17-201ENST00000504195 LYZL1Q6UWQ5 148 aa1.24□□□□□ -2.21
HMGB3P17-201ENST00000504195 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.24□□□□□ -2.21
HMGB3P17-201ENST00000504195 C7orf33Q8WU49 177 aa1.24□□□□□ -2.21
HMGB3P17-201ENST00000504195 ZCCHC13Q8WW36 166 aaKnown RBP1.24□□□□□ -2.21
HMGB3P17-201ENST00000504195 NDUFA4L2Q9NRX3 87 aa1.24□□□□□ -2.21
HMGB3P17-201ENST00000504195 PLAC8Q9NZF1 115 aa1.24□□□□□ -2.21
HMGB3P17-201ENST00000504195 MRPL36Q9P0J6 103 aaKnown RBP1.24□□□□□ -2.21
HMGB3P17-201ENST00000504195 ORMDL1Q9P0S3 153 aa1.24□□□□□ -2.21
HMGB3P17-201ENST00000504195 KLK12Q9UKR0 248 aa1.24□□□□□ -2.21
HMGB3P17-201ENST00000504195 FAM215AQ9Y5M1 114 aa1.24□□□□□ -2.21
HMGB3P17-201ENST00000504195 SNURFQ9Y675 71 aa1.24□□□□□ -2.21
HMGB3P17-201ENST00000504195 TRPM6Q9BX84 2022 aa1.23□□□□□ -2.21
HMGB3P17-201ENST00000504195 PCDH15Q96QU1 1955 aa1.23□□□□□ -2.21
HMGB3P17-201ENST00000504195 LCTP09848 1927 aa1.23□□□□□ -2.21
HMGB3P17-201ENST00000504195 IGLV11-55A0A075B6I3 123 aa1.23□□□□□ -2.21
HMGB3P17-201ENST00000504195 IGLV2-18A0A075B6J9 118 aa1.23□□□□□ -2.21
HMGB3P17-201ENST00000504195 IGHV3OR16-8A0A075B7F1 116 aa1.23□□□□□ -2.21
HMGB3P17-201ENST00000504195 LOC110117498A0A087WWA1 95 aa1.23□□□□□ -2.21
HMGB3P17-201ENST00000504195 TRAV10A0A0B4J240 114 aa1.23□□□□□ -2.21
HMGB3P17-201ENST00000504195 IGHV1-3A0A0C4DH29 117 aa1.23□□□□□ -2.21
HMGB3P17-201ENST00000504195 IGHV3-64DA0A0J9YX35 117 aa1.23□□□□□ -2.21
HMGB3P17-201ENST00000504195 A6NDX4 124 aa1.23□□□□□ -2.21
HMGB3P17-201ENST00000504195 H7C2G1 150 aa1.23□□□□□ -2.21
HMGB3P17-201ENST00000504195 LHBP01229 141 aa1.23□□□□□ -2.21
HMGB3P17-201ENST00000504195 IGLV3-25P01717 112 aa1.23□□□□□ -2.21
HMGB3P17-201ENST00000504195 CLPSP04118 112 aa1.23□□□□□ -2.21
HMGB3P17-201ENST00000504195 CGB3P0DN86 165 aa1.23□□□□□ -2.21
HMGB3P17-201ENST00000504195 CGB7P0DN87 165 aa1.23□□□□□ -2.21
HMGB3P17-201ENST00000504195 TFF3Q07654 80 aa1.23□□□□□ -2.21
HMGB3P17-201ENST00000504195 LUZP6Q538Z0 58 aa1.23□□□□□ -2.21
HMGB3P17-201ENST00000504195 C1orf137Q5JT78 98 aa1.23□□□□□ -2.21
HMGB3P17-201ENST00000504195 C1orf134Q5TEV5 83 aa1.23□□□□□ -2.21
HMGB3P17-201ENST00000504195 SFTA2Q6UW10 78 aa1.23□□□□□ -2.21
HMGB3P17-201ENST00000504195 ENHOQ6UWT2 76 aa1.23□□□□□ -2.21
HMGB3P17-201ENST00000504195 LYPD1Q8N2G4 141 aa1.23□□□□□ -2.21
HMGB3P17-201ENST00000504195 C14orf178Q8N769 122 aaPredicted RBP1.23□□□□□ -2.21
HMGB3P17-201ENST00000504195 Q8N9W7 124 aa1.23□□□□□ -2.21
HMGB3P17-201ENST00000504195 PRR15LQ9BU68 103 aa1.23□□□□□ -2.21
HMGB3P17-201ENST00000504195 SMIM2Q9BVW6 85 aa1.23□□□□□ -2.21
HMGB3P17-201ENST00000504195 LINC01558Q9Y6Z2 57 aa1.23□□□□□ -2.21
HMGB3P17-201ENST00000504195 NCOA6Q14686 2063 aaPredicted RBP1.23□□□□□ -2.21
HMGB3P17-201ENST00000504195 COL5A1P20908 1838 aaPredicted RBP1.22□□□□□ -2.21
HMGB3P17-201ENST00000504195 A8MWP4 228 aa1.22□□□□□ -2.21
HMGB3P17-201ENST00000504195 PANO1I0J062 215 aa1.22□□□□□ -2.21
HMGB3P17-201ENST00000504195 M0R1W7 72 aa1.22□□□□□ -2.21
HMGB3P17-201ENST00000504195 NDUFA3O95167 84 aa1.22□□□□□ -2.21
HMGB3P17-201ENST00000504195 IGLV3-1P01715 115 aa1.22□□□□□ -2.21
HMGB3P17-201ENST00000504195 IAPPP10997 89 aa1.22□□□□□ -2.21
HMGB3P17-201ENST00000504195 FXYD4P59646 89 aa1.22□□□□□ -2.21
HMGB3P17-201ENST00000504195 LINC00322Q6ZN03 302 aaPredicted RBP1.22□□□□□ -2.21
HMGB3P17-201ENST00000504195 Q6ZQT0 140 aa1.22□□□□□ -2.21
HMGB3P17-201ENST00000504195 COX7B2Q8TF08 81 aa1.22□□□□□ -2.21
HMGB3P17-201ENST00000504195 DMAC1Q96GE9 116 aa1.22□□□□□ -2.21
HMGB3P17-201ENST00000504195 LINC00208Q96KT6 92 aa1.22□□□□□ -2.21
HMGB3P17-201ENST00000504195 HIGD2AQ9BW72 106 aa1.22□□□□□ -2.21
HMGB3P17-201ENST00000504195 KLK9Q9UKQ9 250 aa1.22□□□□□ -2.21
HMGB3P17-201ENST00000504195 TIMM8BQ9Y5J9 83 aaPredicted RBP1.22□□□□□ -2.21
HMGB3P17-201ENST00000504195 TANC2Q9HCD6 1990 aa1.21□□□□□ -2.22
HMGB3P17-201ENST00000504195 NUMA1Q14980 2115 aa1.21□□□□□ -2.22
HMGB3P17-201ENST00000504195 KIAA2026Q5HYC2 2103 aa1.21□□□□□ -2.22
HMGB3P17-201ENST00000504195 DYSFO75923 2080 aa1.21□□□□□ -2.22
HMGB3P17-201ENST00000504195 IGKV1D-42A0A075B6H8 117 aa1.21□□□□□ -2.22
HMGB3P17-201ENST00000504195 IGLV4-69A0A075B6H9 119 aa1.21□□□□□ -2.22
HMGB3P17-201ENST00000504195 TRAV21A0A0B4J279 112 aa1.21□□□□□ -2.22
HMGB3P17-201ENST00000504195 A0A1W2PNM2 257 aa1.21□□□□□ -2.22
HMGB3P17-201ENST00000504195 B4DSR2 109 aa1.21□□□□□ -2.22
HMGB3P17-201ENST00000504195 C10orf142B7Z368 130 aa1.21□□□□□ -2.22
HMGB3P17-201ENST00000504195 ZNF861PO60384 105 aa1.21□□□□□ -2.22
HMGB3P17-201ENST00000504195 ZNF137PP52743 207 aa1.21□□□□□ -2.22
HMGB3P17-201ENST00000504195 CMC4P56277 68 aaPredicted RBP1.21□□□□□ -2.22
HMGB3P17-201ENST00000504195 MIR22HGQ0VDD5 57 aa1.21□□□□□ -2.22
HMGB3P17-201ENST00000504195 NNATQ16517 81 aa1.21□□□□□ -2.22
HMGB3P17-201ENST00000504195 FAM27BQ5VT28 67 aa1.21□□□□□ -2.22
HMGB3P17-201ENST00000504195 KRTAP26-1Q6PEX3 210 aa1.21□□□□□ -2.22
HMGB3P17-201ENST00000504195 TMEM105Q8N8V8 129 aa1.21□□□□□ -2.22
HMGB3P17-201ENST00000504195 C15orf56Q8N910 161 aa1.21□□□□□ -2.22
HMGB3P17-201ENST00000504195 DEC1Q9P2X7 70 aa1.21□□□□□ -2.22
HMGB3P17-201ENST00000504195 EML5Q05BV3 1969 aa1.21□□□□□ -2.22
HMGB3P17-201ENST00000504195 FCGBPQ9Y6R7 5405 aaPredicted RBP1.21□□□□□ -2.22
HMGB3P17-201ENST00000504195 DSCAML1Q8TD84 2053 aa1.2□□□□□ -2.22
HMGB3P17-201ENST00000504195 IGHV1-18A0A0C4DH31 117 aa1.2□□□□□ -2.22
HMGB3P17-201ENST00000504195 A0A1B0GVX0 72 aa1.2□□□□□ -2.22
HMGB3P17-201ENST00000504195 ODF3BA8MYP8 253 aa1.2□□□□□ -2.22
HMGB3P17-201ENST00000504195 H0Y9P7 68 aa1.2□□□□□ -2.22
HMGB3P17-201ENST00000504195 UQCR11O14957 56 aa1.2□□□□□ -2.22
HMGB3P17-201ENST00000504195 MGPP08493 103 aa1.2□□□□□ -2.22
HMGB3P17-201ENST00000504195 LINC00315P59091 139 aa1.2□□□□□ -2.22
HMGB3P17-201ENST00000504195 ERHP84090 104 aaKnown RBP1.2□□□□□ -2.22
HMGB3P17-201ENST00000504195 SPAG11BQ08648 103 aa1.2□□□□□ -2.22
HMGB3P17-201ENST00000504195 HCP5Q6MZN7 132 aa1.2□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms