RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 GPR179Q6PRD1 2367 aa4.4□□□□□ -1.7
CLCN3-204ENST00000504131 ANAPC1Q9H1A4 1944 aa4.4□□□□□ -1.7
CLCN3-204ENST00000504131 IGHV3OR16-8A0A075B7F1 116 aa4.4□□□□□ -1.7
CLCN3-204ENST00000504131 IGKV3-20P01619 116 aa4.4□□□□□ -1.7
CLCN3-204ENST00000504131 ZNF833PQ6ZTB9 187 aa4.4□□□□□ -1.71
CLCN3-204ENST00000504131 TMEM167AQ8TBQ9 72 aa4.4□□□□□ -1.71
CLCN3-204ENST00000504131 COL4A2P08572 1712 aa4.4□□□□□ -1.71
CLCN3-204ENST00000504131 UQCR11O14957 56 aa4.4□□□□□ -1.71
CLCN3-204ENST00000504131 PCOTHQ58A44 107 aa4.39□□□□□ -1.71
CLCN3-204ENST00000504131 LRRK1Q38SD2 2015 aa4.39□□□□□ -1.71
CLCN3-204ENST00000504131 ACYP2P14621 99 aa4.39□□□□□ -1.71
CLCN3-204ENST00000504131 TECTAO75443 2155 aa4.39□□□□□ -1.71
CLCN3-204ENST00000504131 C10orf55Q5SWW7 151 aa4.39□□□□□ -1.71
CLCN3-204ENST00000504131 C9orf106Q8NAJ2 232 aa4.39□□□□□ -1.71
CLCN3-204ENST00000504131 Q6ZQT0 140 aa4.39□□□□□ -1.71
CLCN3-204ENST00000504131 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.38□□□□□ -1.71
CLCN3-204ENST00000504131 LY6G6EA0A0G2JKS1 128 aa4.38□□□□□ -1.71
CLCN3-204ENST00000504131 IGKV2-29A2NJV5 120 aaPredicted RBP4.38□□□□□ -1.71
CLCN3-204ENST00000504131 FAM218AQ96MZ4 157 aa4.38□□□□□ -1.71
CLCN3-204ENST00000504131 UTRNP46939 3433 aa4.38□□□□□ -1.71
CLCN3-204ENST00000504131 B4DSR2 109 aa4.38□□□□□ -1.71
CLCN3-204ENST00000504131 IGLV2-14P01704 120 aa4.38□□□□□ -1.71
CLCN3-204ENST00000504131 Q6ZPA2 131 aa4.38□□□□□ -1.71
CLCN3-204ENST00000504131 PCNX3Q9H6A9 2034 aa4.38□□□□□ -1.71
CLCN3-204ENST00000504131 H3BPC8 53 aa4.38□□□□□ -1.71
CLCN3-204ENST00000504131 DEFB113Q30KQ7 82 aa4.38□□□□□ -1.71
CLCN3-204ENST00000504131 C10orf25Q5T742 122 aa4.38□□□□□ -1.71
CLCN3-204ENST00000504131 A8MWP4 228 aa4.38□□□□□ -1.71
CLCN3-204ENST00000504131 IGHV4-30-4P0DP06 118 aa4.38□□□□□ -1.71
CLCN3-204ENST00000504131 SDK2Q58EX2 2172 aa4.37□□□□□ -1.71
CLCN3-204ENST00000504131 IGLV4-69A0A075B6H9 119 aa4.37□□□□□ -1.71
CLCN3-204ENST00000504131 Q6ZTI0 123 aa4.37□□□□□ -1.71
CLCN3-204ENST00000504131 INTS1Q8N201 2190 aaKnown RBP4.37□□□□□ -1.71
CLCN3-204ENST00000504131 H3BRN7 92 aa4.37□□□□□ -1.71
CLCN3-204ENST00000504131 TET2Q6N021 2002 aaPredicted RBP4.37□□□□□ -1.71
CLCN3-204ENST00000504131 K7EQG2 157 aa4.37□□□□□ -1.71
CLCN3-204ENST00000504131 C7orf69Q9H7B7 122 aa4.37□□□□□ -1.71
CLCN3-204ENST00000504131 AGRNO00468 2067 aa4.37□□□□□ -1.71
CLCN3-204ENST00000504131 MINOS1Q5TGZ0 78 aa4.37□□□□□ -1.71
CLCN3-204ENST00000504131 C8orf17Q9NRJ1 99 aa4.37□□□□□ -1.71
CLCN3-204ENST00000504131 EPM2AB3EWF7 344 aa4.36□□□□□ -1.71
CLCN3-204ENST00000504131 IGHV3-38A0A0C4DH36 116 aa4.36□□□□□ -1.71
CLCN3-204ENST00000504131 FREM1Q5H8C1 2179 aa4.36□□□□□ -1.71
CLCN3-204ENST00000504131 TRBV7-4A0A0J9YYF1 115 aa4.36□□□□□ -1.71
CLCN3-204ENST00000504131 ASB16-AS1Q495Z4 193 aa4.35□□□□□ -1.71
CLCN3-204ENST00000504131 ADM2Q7Z4H4 148 aa4.35□□□□□ -1.71
CLCN3-204ENST00000504131 KAAG1Q9UBP8 84 aa4.35□□□□□ -1.71
CLCN3-204ENST00000504131 NCOA6Q14686 2063 aaPredicted RBP4.35□□□□□ -1.71
CLCN3-204ENST00000504131 SMIM1B2RUZ4 78 aa4.35□□□□□ -1.71
CLCN3-204ENST00000504131 LMO4P61968 165 aa4.35□□□□□ -1.71
CLCN3-204ENST00000504131 COX7BP24311 80 aa4.35□□□□□ -1.71
CLCN3-204ENST00000504131 CAMK2N1Q7Z7J9 78 aa4.35□□□□□ -1.71
CLCN3-204ENST00000504131 PRR14LQ5THK1 2151 aa4.35□□□□□ -1.71
CLCN3-204ENST00000504131 GAS8-AS1O95177 125 aa4.35□□□□□ -1.71
CLCN3-204ENST00000504131 C14orf177Q52M58 125 aa4.35□□□□□ -1.71
CLCN3-204ENST00000504131 Q6ZTC4 211 aa4.34□□□□□ -1.71
CLCN3-204ENST00000504131 ZFAND2AQ8N6M9 145 aa4.34□□□□□ -1.71
CLCN3-204ENST00000504131 U3KQA8 63 aa4.34□□□□□ -1.71
CLCN3-204ENST00000504131 ZFHX2Q9C0A1 2572 aaPredicted RBP4.34□□□□□ -1.71
CLCN3-204ENST00000504131 LINC01600Q96MT4 127 aa4.34□□□□□ -1.71
CLCN3-204ENST00000504131 ZNRD1Q9P1U0 126 aa4.34□□□□□ -1.71
CLCN3-204ENST00000504131 PCNX2A6NKB5 2137 aa4.34□□□□□ -1.71
CLCN3-204ENST00000504131 MUC22E2RYF6 1773 aaPredicted RBP4.34□□□□□ -1.71
CLCN3-204ENST00000504131 BPTFQ12830 3046 aa4.34□□□□□ -1.71
CLCN3-204ENST00000504131 IGLV5-37A0A075B6J1 123 aa4.34□□□□□ -1.71
CLCN3-204ENST00000504131 OCR1Q9BZK8 76 aa4.34□□□□□ -1.71
CLCN3-204ENST00000504131 KLLNB2CW77 178 aa4.34□□□□□ -1.72
CLCN3-204ENST00000504131 DMAC1Q96GE9 116 aa4.34□□□□□ -1.72
CLCN3-204ENST00000504131 COL6A6A6NMZ7 2263 aa4.34□□□□□ -1.72
CLCN3-204ENST00000504131 IGLV4-3A0A075B6K6 122 aa4.33□□□□□ -1.72
CLCN3-204ENST00000504131 IGIPA6NJ69 53 aa4.33□□□□□ -1.72
CLCN3-204ENST00000504131 DAZAP2Q15038 168 aaPredicted RBP4.33□□□□□ -1.72
CLCN3-204ENST00000504131 LINC00574Q9H8X3 128 aa4.33□□□□□ -1.72
CLCN3-204ENST00000504131 C2orf16Q68DN1 1984 aa4.33□□□□□ -1.72
CLCN3-204ENST00000504131 TLX1NBP0CAT3 122 aa4.33□□□□□ -1.72
CLCN3-204ENST00000504131 CDC42SE2Q9NRR3 84 aa4.33□□□□□ -1.72
CLCN3-204ENST00000504131 Q9BRP9 147 aa4.33□□□□□ -1.72
CLCN3-204ENST00000504131 CEP250Q9BV73 2442 aa4.33□□□□□ -1.72
CLCN3-204ENST00000504131 C5orf56Q8N8D9 126 aa4.33□□□□□ -1.72
CLCN3-204ENST00000504131 Q8NAQ8 132 aa4.33□□□□□ -1.72
CLCN3-204ENST00000504131 PLA2G1BP04054 148 aaKnown RBP4.32□□□□□ -1.72
CLCN3-204ENST00000504131 Q8N9P0 234 aaPredicted RBP4.32□□□□□ -1.72
CLCN3-204ENST00000504131 USMG5Q96IX5 58 aa4.32□□□□□ -1.72
CLCN3-204ENST00000504131 LINC00575Q6W349 94 aa4.32□□□□□ -1.72
CLCN3-204ENST00000504131 CDKN2A-AS1Q9UH64 79 aa4.32□□□□□ -1.72
CLCN3-204ENST00000504131 DOCK10Q96BY6 2186 aa4.32□□□□□ -1.72
CLCN3-204ENST00000504131 ABCA4P78363 2273 aa4.32□□□□□ -1.72
CLCN3-204ENST00000504131 IGLV8-61A0A075B6I0 122 aa4.32□□□□□ -1.72
CLCN3-204ENST00000504131 IGLV5-39A0A0G2JS06 123 aa4.32□□□□□ -1.72
CLCN3-204ENST00000504131 IGKV1OR2-108A0A075B7D4 117 aa4.32□□□□□ -1.72
CLCN3-204ENST00000504131 ZNF318Q5VUA4 2279 aa4.31□□□□□ -1.72
CLCN3-204ENST00000504131 COX17Q14061 63 aa4.31□□□□□ -1.72
CLCN3-204ENST00000504131 C18orf65Q6ZTR6 163 aa4.31□□□□□ -1.72
CLCN3-204ENST00000504131 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.31□□□□□ -1.72
CLCN3-204ENST00000504131 P0C879 139 aa4.31□□□□□ -1.72
CLCN3-204ENST00000504131 CRIP1P50238 77 aa4.31□□□□□ -1.72
CLCN3-204ENST00000504131 MUC7Q8TAX7 377 aa4.31□□□□□ -1.72
CLCN3-204ENST00000504131 TNCP24821 2201 aa4.31□□□□□ -1.72
CLCN3-204ENST00000504131 PINLYPA6NC86 204 aa4.31□□□□□ -1.72
CLCN3-204ENST00000504131 RP1P56715 2156 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms