RNA–Protein interactions for RNA: ENST00000498548.1

NR1H3-227, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 3

Gene NR1H3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-227ENST00000498548 TMEM136Q6ZRR5 245 aa10.18□□□□□ -0.78
NR1H3-227ENST00000498548 FAM104AQ969W3 186 aa10.18□□□□□ -0.78
NR1H3-227ENST00000498548 CARD19Q96LW7 228 aa10.18□□□□□ -0.78
NR1H3-227ENST00000498548 TIMM21Q9BVV7 248 aa10.18□□□□□ -0.78
NR1H3-227ENST00000498548 IGLV4-69A0A075B6H9 119 aa10.17□□□□□ -0.78
NR1H3-227ENST00000498548 COX7A2LO14548 114 aa10.17□□□□□ -0.78
NR1H3-227ENST00000498548 RAB5AP20339 215 aa10.17□□□□□ -0.78
NR1H3-227ENST00000498548 ATP5L2Q7Z4Y8 100 aa10.17□□□□□ -0.78
NR1H3-227ENST00000498548 STPG4Q8N801 248 aa10.17□□□□□ -0.78
NR1H3-227ENST00000498548 PRELID3AQ96N28 172 aa10.17□□□□□ -0.78
NR1H3-227ENST00000498548 LOC389332A0A1B0GUA5 103 aa10.16□□□□□ -0.78
NR1H3-227ENST00000498548 PPBPP02775 128 aa10.16□□□□□ -0.78
NR1H3-227ENST00000498548 SYCNQ0VAF6 134 aa10.16□□□□□ -0.78
NR1H3-227ENST00000498548 ORMDL3Q8N138 153 aa10.16□□□□□ -0.78
NR1H3-227ENST00000498548 PHOX2AO14813 284 aa10.15□□□□□ -0.78
NR1H3-227ENST00000498548 IMMP2LQ96T52 175 aa10.15□□□□□ -0.78
NR1H3-227ENST00000498548 OXTP01178 125 aa10.14□□□□□ -0.79
NR1H3-227ENST00000498548 Q6ZRU5 148 aa10.14□□□□□ -0.79
NR1H3-227ENST00000498548 SPANXA1Q9NS26 97 aa10.13□□□□□ -0.79
NR1H3-227ENST00000498548 TGIF2-C20orf24A0A0A6YYL0 155 aa10.12□□□□□ -0.79
NR1H3-227ENST00000498548 GAGE2BQ13066 116 aa10.12□□□□□ -0.79
NR1H3-227ENST00000498548 CAMK2N2Q96S95 79 aa10.12□□□□□ -0.79
NR1H3-227ENST00000498548 MRPS36P82909 103 aaKnown RBP10.11□□□□□ -0.79
NR1H3-227ENST00000498548 C7orf33Q8WU49 177 aa10.11□□□□□ -0.79
NR1H3-227ENST00000498548 A0A0J9YXV3 536 aa10.1□□□□□ -0.79
NR1H3-227ENST00000498548 IFITM10A6NMD0 228 aa10.1□□□□□ -0.79
NR1H3-227ENST00000498548 S100PP25815 95 aa10.1□□□□□ -0.79
NR1H3-227ENST00000498548 MAP1LC3AQ9H492 121 aa10.1□□□□□ -0.79
NR1H3-227ENST00000498548 PRSS47A8MTI9 375 aa10.09□□□□□ -0.79
NR1H3-227ENST00000498548 APOMO95445 188 aa10.09□□□□□ -0.79
NR1H3-227ENST00000498548 RAB5BP61020 215 aa10.09□□□□□ -0.79
NR1H3-227ENST00000498548 SPAG11BQ08648 103 aa10.09□□□□□ -0.79
NR1H3-227ENST00000498548 IGLV4-3A0A075B6K6 122 aa10.08□□□□□ -0.8
NR1H3-227ENST00000498548 TRAV9-1A0A075B6T8 112 aa10.08□□□□□ -0.8
NR1H3-227ENST00000498548 IGHV3OR16-9A0A0B4J2B5 98 aa10.08□□□□□ -0.8
NR1H3-227ENST00000498548 LOC107984640A0A0U1RRK4 108 aa10.08□□□□□ -0.8
NR1H3-227ENST00000498548 IFI27P40305 119 aaPredicted RBP10.08□□□□□ -0.8
NR1H3-227ENST00000498548 PTTG1IPP53801 180 aa10.08□□□□□ -0.8
NR1H3-227ENST00000498548 ZC2HC1BQ5TFG8 222 aa10.08□□□□□ -0.8
NR1H3-227ENST00000498548 Q8N8P6 123 aa10.08□□□□□ -0.8
NR1H3-227ENST00000498548 ORAOV1Q8WV07 137 aa10.08□□□□□ -0.8
NR1H3-227ENST00000498548 C2orf48Q96LS8 159 aa10.08□□□□□ -0.8
NR1H3-227ENST00000498548 LINC00474Q9P2X8 69 aa10.08□□□□□ -0.8
NR1H3-227ENST00000498548 PKIGQ9Y2B9 76 aa10.07□□□□□ -0.8
NR1H3-227ENST00000498548 LAMTOR2Q9Y2Q5 125 aa10.07□□□□□ -0.8
NR1H3-227ENST00000498548 A0A1W2PNN7 141 aa10.06□□□□□ -0.8
NR1H3-227ENST00000498548 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.06□□□□□ -0.8
NR1H3-227ENST00000498548 KIAA1644Q3SXP7 199 aa10.06□□□□□ -0.8
NR1H3-227ENST00000498548 PYGO1Q9Y3Y4 419 aa10.06□□□□□ -0.8
NR1H3-227ENST00000498548 PRR3P79522 188 aaKnown RBP10.05□□□□□ -0.8
NR1H3-227ENST00000498548 RPL18AQ02543 176 aaKnown RBP10.05□□□□□ -0.8
NR1H3-227ENST00000498548 OR10D4PQ8NGN7 298 aa10.05□□□□□ -0.8
NR1H3-227ENST00000498548 TMEM141Q96I45 108 aa10.05□□□□□ -0.8
NR1H3-227ENST00000498548 TRGC2P03986 189 aa10.04□□□□□ -0.8
NR1H3-227ENST00000498548 LINC00242Q5T6M2 205 aa10.04□□□□□ -0.8
NR1H3-227ENST00000498548 C10orf25Q5T742 122 aa10.04□□□□□ -0.8
NR1H3-227ENST00000498548 C2orf66Q6UXQ4 117 aa10.04□□□□□ -0.8
NR1H3-227ENST00000498548 C5orf52A6NGY3 159 aa10.03□□□□□ -0.8
NR1H3-227ENST00000498548 MT1HL1P0DM35 61 aa10.03□□□□□ -0.8
NR1H3-227ENST00000498548 UNQ6190/PRO20217Q6UXQ8 127 aa10.03□□□□□ -0.8
NR1H3-227ENST00000498548 CYSLTR1Q9Y271 337 aa10.03□□□□□ -0.8
NR1H3-227ENST00000498548 C9orf116Q5BN46 136 aaPredicted RBP10.02□□□□□ -0.81
NR1H3-227ENST00000498548 TEX43Q6ZNM6 134 aa10.02□□□□□ -0.81
NR1H3-227ENST00000498548 UBE2D1P51668 147 aa10.01□□□□□ -0.81
NR1H3-227ENST00000498548 RNF151Q2KHN1 245 aa10.01□□□□□ -0.81
NR1H3-227ENST00000498548 ORMDL2Q53FV1 153 aa10.01□□□□□ -0.81
NR1H3-227ENST00000498548 LINC00173Q6ZV60 143 aa10.01□□□□□ -0.81
NR1H3-227ENST00000498548 MRPL35Q9NZE8 188 aaKnown RBP10.01□□□□□ -0.81
NR1H3-227ENST00000498548 A0A087WZ39 114 aa10□□□□□ -0.81
NR1H3-227ENST00000498548 NDUFA1O15239 70 aa10□□□□□ -0.81
NR1H3-227ENST00000498548 KIAA0087Q14695 138 aa10□□□□□ -0.81
NR1H3-227ENST00000498548 SERTAD4-AS1Q5TG53 156 aa10□□□□□ -0.81
NR1H3-227ENST00000498548 VCX2Q9H322 139 aa10□□□□□ -0.81
NR1H3-227ENST00000498548 C6orf48Q9UBA6 75 aa10□□□□□ -0.81
NR1H3-227ENST00000498548 IGIPA6NJ69 53 aa9.99□□□□□ -0.81
NR1H3-227ENST00000498548 HIST1H2BKO60814 126 aa9.99□□□□□ -0.81
NR1H3-227ENST00000498548 HIST1H2BJP06899 126 aa9.99□□□□□ -0.81
NR1H3-227ENST00000498548 HIST1H2BOP23527 126 aa9.99□□□□□ -0.81
NR1H3-227ENST00000498548 HIST1H2BBP33778 126 aa9.99□□□□□ -0.81
NR1H3-227ENST00000498548 HIST1H2BDP58876 126 aa9.99□□□□□ -0.81
NR1H3-227ENST00000498548 SNRPEP62304 92 aaKnown RBP9.99□□□□□ -0.81
NR1H3-227ENST00000498548 HIST1H2BCP62807 126 aa9.99□□□□□ -0.81
NR1H3-227ENST00000498548 HIST2H2BEQ16778 126 aa9.99□□□□□ -0.81
NR1H3-227ENST00000498548 COX19Q49B96 90 aa9.99□□□□□ -0.81
NR1H3-227ENST00000498548 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.99□□□□□ -0.81
NR1H3-227ENST00000498548 Q6ZN92 141 aa9.99□□□□□ -0.81
NR1H3-227ENST00000498548 PHF5AQ7RTV0 110 aaKnown RBP9.99□□□□□ -0.81
NR1H3-227ENST00000498548 HIST1H2BHQ93079 126 aa9.99□□□□□ -0.81
NR1H3-227ENST00000498548 AMELXQ99217 191 aa9.99□□□□□ -0.81
NR1H3-227ENST00000498548 HIST1H2BNQ99877 126 aa9.99□□□□□ -0.81
NR1H3-227ENST00000498548 HIST1H2BMQ99879 126 aa9.99□□□□□ -0.81
NR1H3-227ENST00000498548 C2orf88Q9BSF0 95 aa9.99□□□□□ -0.81
NR1H3-227ENST00000498548 NXT2Q9NPJ8 142 aaKnown RBP9.99□□□□□ -0.81
NR1H3-227ENST00000498548 S100A6P06703 90 aa9.98□□□□□ -0.81
NR1H3-227ENST00000498548 C2orf82Q6UX34 121 aa9.98□□□□□ -0.81
NR1H3-227ENST00000498548 Q6ZRP5 223 aa9.98□□□□□ -0.81
NR1H3-227ENST00000498548 TNXBP22105 4242 aa9.98□□□□□ -0.81
NR1H3-227ENST00000498548 FAM168BA1KXE4 195 aa9.97□□□□□ -0.81
NR1H3-227ENST00000498548 F8WDY8 70 aa9.97□□□□□ -0.81
NR1H3-227ENST00000498548 K7EMI3 77 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms