RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 LOC107984640A0A0U1RRK4 108 aa15.23■□□□□ 0.03
HLA-C-209ENST00000495835 F8WDY8 70 aa15.23■□□□□ 0.03
HLA-C-209ENST00000495835 C5orf38Q86SI9 138 aa15.23■□□□□ 0.03
HLA-C-209ENST00000495835 IFI27P40305 119 aaPredicted RBP15.22■□□□□ 0.03
HLA-C-209ENST00000495835 CAMK2N2Q96S95 79 aa15.22■□□□□ 0.03
HLA-C-209ENST00000495835 IGHV3OR16-9A0A0B4J2B5 98 aa15.21■□□□□ 0.03
HLA-C-209ENST00000495835 IMMP2LQ96T52 175 aa15.21■□□□□ 0.03
HLA-C-209ENST00000495835 PTTG1IPP53801 180 aa15.2■□□□□ 0.02
HLA-C-209ENST00000495835 RNF151Q2KHN1 245 aa15.2■□□□□ 0.02
HLA-C-209ENST00000495835 MAP1LC3AQ9H492 121 aa15.2■□□□□ 0.02
HLA-C-209ENST00000495835 IFITM10A6NMD0 228 aa15.19■□□□□ 0.02
HLA-C-209ENST00000495835 K7EMI3 77 aa15.19■□□□□ 0.02
HLA-C-209ENST00000495835 UQCC3Q6UW78 93 aa15.19■□□□□ 0.02
HLA-C-209ENST00000495835 OPRPNQ99935 248 aaPredicted RBP15.19■□□□□ 0.02
HLA-C-209ENST00000495835 SPAG11BQ08648 103 aa15.17■□□□□ 0.02
HLA-C-209ENST00000495835 Q8N8P6 123 aa15.17■□□□□ 0.02
HLA-C-209ENST00000495835 NPSP0C0P6 89 aa15.15■□□□□ 0.02
HLA-C-209ENST00000495835 PRR3P79522 188 aaKnown RBP15.15■□□□□ 0.02
HLA-C-209ENST00000495835 TMEM141Q96I45 108 aa15.15■□□□□ 0.02
HLA-C-209ENST00000495835 IGLV4-3A0A075B6K6 122 aa15.14■□□□□ 0.01
HLA-C-209ENST00000495835 TGIF2-C20orf24A0A0A6YYL0 155 aa15.14■□□□□ 0.01
HLA-C-209ENST00000495835 LOC389332A0A1B0GUA5 103 aa15.14■□□□□ 0.01
HLA-C-209ENST00000495835 GAGE2BQ13066 116 aa15.14■□□□□ 0.01
HLA-C-209ENST00000495835 ORMDL2Q53FV1 153 aa15.14■□□□□ 0.01
HLA-C-209ENST00000495835 ORAOV1Q8WV07 137 aa15.14■□□□□ 0.01
HLA-C-209ENST00000495835 CTDSP1Q9GZU7 261 aa15.14■□□□□ 0.01
HLA-C-209ENST00000495835 MRPL35Q9NZE8 188 aaKnown RBP15.14■□□□□ 0.01
HLA-C-209ENST00000495835 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.13■□□□□ 0.01
HLA-C-209ENST00000495835 CYSLTR1Q9Y271 337 aa15.13■□□□□ 0.01
HLA-C-209ENST00000495835 TRAV9-1A0A075B6T8 112 aa15.12■□□□□ 0.01
HLA-C-209ENST00000495835 A0A087WZ39 114 aa15.12■□□□□ 0.01
HLA-C-209ENST00000495835 TMEM218A2RU14 115 aa15.12■□□□□ 0.01
HLA-C-209ENST00000495835 NXT2Q9NPJ8 142 aaKnown RBP15.12■□□□□ 0.01
HLA-C-209ENST00000495835 NDUFA1O15239 70 aa15.11■□□□□ 0.01
HLA-C-209ENST00000495835 G0S2P27469 103 aa15.11■□□□□ 0.01
HLA-C-209ENST00000495835 C2orf66Q6UXQ4 117 aa15.11■□□□□ 0.01
HLA-C-209ENST00000495835 TEX43Q6ZNM6 134 aa15.11■□□□□ 0.01
HLA-C-209ENST00000495835 HMCN2Q8NDA2 5059 aa15.1■□□□□ 0.01
HLA-C-209ENST00000495835 LINC00242Q5T6M2 205 aa15.1■□□□□ 0.01
HLA-C-209ENST00000495835 Q6ZRP5 223 aa15.1■□□□□ 0.01
HLA-C-209ENST00000495835 LINC01561Q8N1V8 128 aa15.1■□□□□ 0.01
HLA-C-209ENST00000495835 Q6ZN92 141 aa15.09■□□□□ 0.01
HLA-C-209ENST00000495835 C2orf88Q9BSF0 95 aa15.09■□□□□ 0.01
HLA-C-209ENST00000495835 TLX1NBP0CAT3 122 aa15.08■□□□□ 0
HLA-C-209ENST00000495835 MT1HL1P0DM35 61 aa15.08■□□□□ 0
HLA-C-209ENST00000495835 ADCYAP1P18509 176 aa15.08■□□□□ 0
HLA-C-209ENST00000495835 IFITM2Q01629 132 aa15.08■□□□□ 0
HLA-C-209ENST00000495835 SEC11CQ9BY50 192 aa15.08■□□□□ 0
HLA-C-209ENST00000495835 UBE2D1P51668 147 aa15.07■□□□□ 0
HLA-C-209ENST00000495835 RPL18AQ02543 176 aaKnown RBP15.07■□□□□ 0
HLA-C-209ENST00000495835 SPINK6Q6UWN8 80 aa15.07■□□□□ 0
HLA-C-209ENST00000495835 AMELXQ99217 191 aa15.07■□□□□ 0
HLA-C-209ENST00000495835 A0A1W2PNN7 141 aa15.06■□□□□ 0
HLA-C-209ENST00000495835 VCX2Q9H322 139 aa15.06■□□□□ 0
HLA-C-209ENST00000495835 C9orf116Q5BN46 136 aaPredicted RBP15.05■□□□□ -0
HLA-C-209ENST00000495835 PAPPA-AS1Q5QFB9 102 aa15.05■□□□□ -0
HLA-C-209ENST00000495835 A0A0J9YXV3 536 aa15.04■□□□□ -0
HLA-C-209ENST00000495835 IGIPA6NJ69 53 aa15.04■□□□□ -0
HLA-C-209ENST00000495835 KIAA0087Q14695 138 aa15.04■□□□□ -0
HLA-C-209ENST00000495835 FAM19A3Q7Z5A8 133 aa15.04■□□□□ -0
HLA-C-209ENST00000495835 S100PP25815 95 aa15.02■□□□□ -0
HLA-C-209ENST00000495835 SRSF9Q13242 221 aaKnown RBP eCLIP15.02■□□□□ -0
HLA-C-209ENST00000495835 UNQ6190/PRO20217Q6UXQ8 127 aa15.02■□□□□ -0
HLA-C-209ENST00000495835 LINC00173Q6ZV60 143 aa15.02■□□□□ -0
HLA-C-209ENST00000495835 LINC01600Q96MT4 127 aa15.02■□□□□ -0
HLA-C-209ENST00000495835 TRBV30A0A0K0K1B3 111 aa15.01□□□□□ -0.01
HLA-C-209ENST00000495835 SEC11AP67812 179 aa15.01□□□□□ -0.01
HLA-C-209ENST00000495835 COX19Q49B96 90 aa15.01□□□□□ -0.01
HLA-C-209ENST00000495835 C10orf25Q5T742 122 aa15.01□□□□□ -0.01
HLA-C-209ENST00000495835 TIMM17AQ99595 171 aa15.01□□□□□ -0.01
HLA-C-209ENST00000495835 GNB1LQ9BYB4 327 aa15.01□□□□□ -0.01
HLA-C-209ENST00000495835 C6orf48Q9UBA6 75 aa15.01□□□□□ -0.01
HLA-C-209ENST00000495835 LINC01549A6NIU2 74 aa15□□□□□ -0.01
HLA-C-209ENST00000495835 REG3GQ6UW15 175 aa15□□□□□ -0.01
HLA-C-209ENST00000495835 TOMM6Q96B49 74 aa14.99□□□□□ -0.01
HLA-C-209ENST00000495835 PLA2G2DQ9UNK4 145 aa14.99□□□□□ -0.01
HLA-C-209ENST00000495835 TNXBP22105 4242 aa14.98□□□□□ -0.01
HLA-C-209ENST00000495835 HERVK_113P63121 156 aa14.97□□□□□ -0.01
HLA-C-209ENST00000495835 KIAA1644Q3SXP7 199 aa14.97□□□□□ -0.01
HLA-C-209ENST00000495835 C10orf91Q5T1B1 145 aa14.96□□□□□ -0.01
HLA-C-209ENST00000495835 ERASQ7Z444 233 aa14.96□□□□□ -0.01
HLA-C-209ENST00000495835 PACRGQ96M98 296 aaPredicted RBP14.96□□□□□ -0.01
HLA-C-209ENST00000495835 ZC2HC1BQ5TFG8 222 aa14.95□□□□□ -0.02
HLA-C-209ENST00000495835 PSORS1C2Q9UIG4 136 aa14.95□□□□□ -0.02
HLA-C-209ENST00000495835 LINC01546A6NGU7 62 aa14.94□□□□□ -0.02
HLA-C-209ENST00000495835 NDUFC2-KCTD14E9PQ53 114 aa14.94□□□□□ -0.02
HLA-C-209ENST00000495835 MT-ND6P03923 174 aa14.94□□□□□ -0.02
HLA-C-209ENST00000495835 PRSS2P07478 247 aa14.94□□□□□ -0.02
HLA-C-209ENST00000495835 COMMD7Q86VX2 200 aa14.94□□□□□ -0.02
HLA-C-209ENST00000495835 PHF5AQ7RTV0 110 aaKnown RBP14.93□□□□□ -0.02
HLA-C-209ENST00000495835 Q8IZM0 81 aa14.93□□□□□ -0.02
HLA-C-209ENST00000495835 ALKBH7Q9BT30 221 aaPredicted RBP14.93□□□□□ -0.02
HLA-C-209ENST00000495835 RHEBQ15382 184 aa14.92□□□□□ -0.02
HLA-C-209ENST00000495835 C2orf82Q6UX34 121 aa14.92□□□□□ -0.02
HLA-C-209ENST00000495835 GAGE2EQ4V326 116 aa14.91□□□□□ -0.02
HLA-C-209ENST00000495835 C6orf226Q5I0X4 101 aa14.91□□□□□ -0.02
HLA-C-209ENST00000495835 SCGB3A1Q96QR1 104 aa14.91□□□□□ -0.02
HLA-C-209ENST00000495835 GEMIN7Q9H840 131 aaKnown RBP14.91□□□□□ -0.02
HLA-C-209ENST00000495835 GAGE2DQ9UEU5 116 aa14.91□□□□□ -0.02
HLA-C-209ENST00000495835 CARHSP1Q9Y2V2 147 aaKnown RBP14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms