RNA–Protein interactions for RNA: ENST00000488631.1

PDPN-206, Transcript of podoplanin, humanhuman

TSL 3

Gene PDPN, Length 794 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-206ENST00000488631 VCX2Q9H322 139 aa6.42□□□□□ -1.38
PDPN-206ENST00000488631 CSDC2Q9Y534 153 aaKnown RBP6.42□□□□□ -1.38
PDPN-206ENST00000488631 IGHV3-64A0A075B6Q5 118 aa6.41□□□□□ -1.38
PDPN-206ENST00000488631 EPM2AB3EWF7 344 aa6.41□□□□□ -1.38
PDPN-206ENST00000488631 APOMO95445 188 aa6.41□□□□□ -1.38
PDPN-206ENST00000488631 TEX43Q6ZNM6 134 aa6.41□□□□□ -1.38
PDPN-206ENST00000488631 TMEM141Q96I45 108 aa6.41□□□□□ -1.38
PDPN-206ENST00000488631 RYR1P21817 5038 aa6.41□□□□□ -1.38
PDPN-206ENST00000488631 K7EMI3 77 aa6.4□□□□□ -1.38
PDPN-206ENST00000488631 PAPPA-AS1Q5QFB9 102 aa6.4□□□□□ -1.38
PDPN-206ENST00000488631 LINC00526Q96FQ7 95 aa6.4□□□□□ -1.38
PDPN-206ENST00000488631 FAM30AQ9NZY2 134 aa6.4□□□□□ -1.38
PDPN-206ENST00000488631 DYNC1H1Q14204 4646 aaKnown RBP6.4□□□□□ -1.39
PDPN-206ENST00000488631 KRTAP4-8A0A0G2JLE6 195 aa6.39□□□□□ -1.39
PDPN-206ENST00000488631 PRSS47A8MTI9 375 aa6.39□□□□□ -1.39
PDPN-206ENST00000488631 XGP55808 180 aa6.39□□□□□ -1.39
PDPN-206ENST00000488631 MRPS36P82909 103 aaKnown RBP6.39□□□□□ -1.39
PDPN-206ENST00000488631 Q8N1X5 172 aa6.39□□□□□ -1.39
PDPN-206ENST00000488631 C15orf56Q8N910 161 aa6.39□□□□□ -1.39
PDPN-206ENST00000488631 SCGB3A1Q96QR1 104 aa6.39□□□□□ -1.39
PDPN-206ENST00000488631 ALKBH7Q9BT30 221 aaPredicted RBP6.39□□□□□ -1.39
PDPN-206ENST00000488631 PKHD1P08F94 4074 aa6.39□□□□□ -1.39
PDPN-206ENST00000488631 NDUFA6P56556 154 aa6.38□□□□□ -1.39
PDPN-206ENST00000488631 C9orf163Q8N9P6 203 aa6.38□□□□□ -1.39
PDPN-206ENST00000488631 PYGO1Q9Y3Y4 419 aa6.38□□□□□ -1.39
PDPN-206ENST00000488631 IGLV4-3A0A075B6K6 122 aa6.37□□□□□ -1.39
PDPN-206ENST00000488631 GVQW2A0A096LPI5 108 aaPredicted RBP6.37□□□□□ -1.39
PDPN-206ENST00000488631 IGKV2-24A0A0C4DH68 120 aa6.37□□□□□ -1.39
PDPN-206ENST00000488631 CNBPP62633 177 aaKnown RBP6.37□□□□□ -1.39
PDPN-206ENST00000488631 SPAG11BQ08648 103 aa6.37□□□□□ -1.39
PDPN-206ENST00000488631 ZC2HC1BQ5TFG8 222 aa6.37□□□□□ -1.39
PDPN-206ENST00000488631 ORAOV1Q8WV07 137 aa6.37□□□□□ -1.39
PDPN-206ENST00000488631 CARD19Q96LW7 228 aa6.37□□□□□ -1.39
PDPN-206ENST00000488631 CAMK2N2Q96S95 79 aa6.37□□□□□ -1.39
PDPN-206ENST00000488631 CHAC1Q9BUX1 264 aa6.37□□□□□ -1.39
PDPN-206ENST00000488631 GEMIN7Q9H840 131 aaKnown RBP6.37□□□□□ -1.39
PDPN-206ENST00000488631 PKIGQ9Y2B9 76 aa6.37□□□□□ -1.39
PDPN-206ENST00000488631 IGLV4-69A0A075B6H9 119 aa6.36□□□□□ -1.39
PDPN-206ENST00000488631 RAB5BP61020 215 aa6.36□□□□□ -1.39
PDPN-206ENST00000488631 COX6A2Q02221 97 aa6.36□□□□□ -1.39
PDPN-206ENST00000488631 SYCNQ0VAF6 134 aa6.36□□□□□ -1.39
PDPN-206ENST00000488631 Q5VSD8 79 aa6.36□□□□□ -1.39
PDPN-206ENST00000488631 SCXQ7RTU7 201 aa6.36□□□□□ -1.39
PDPN-206ENST00000488631 CBLN2Q8IUK8 224 aa6.36□□□□□ -1.39
PDPN-206ENST00000488631 PACRGQ96M98 296 aaPredicted RBP6.36□□□□□ -1.39
PDPN-206ENST00000488631 LRP1BQ9NZR2 4599 aa6.35□□□□□ -1.39
PDPN-206ENST00000488631 PRSS2P07478 247 aa6.35□□□□□ -1.39
PDPN-206ENST00000488631 MAJINQ3KP22 176 aa6.35□□□□□ -1.39
PDPN-206ENST00000488631 TOMM6Q96B49 74 aa6.35□□□□□ -1.39
PDPN-206ENST00000488631 DNAH5Q8TE73 4624 aa6.34□□□□□ -1.39
PDPN-206ENST00000488631 LINC01549A6NIU2 74 aa6.34□□□□□ -1.39
PDPN-206ENST00000488631 SLPIP03973 132 aa6.34□□□□□ -1.39
PDPN-206ENST00000488631 PLA2G1BP04054 148 aaKnown RBP6.34□□□□□ -1.39
PDPN-206ENST00000488631 LINC00614P0C842 121 aa6.34□□□□□ -1.39
PDPN-206ENST00000488631 CHTF8P0CG12 524 aa6.34□□□□□ -1.39
PDPN-206ENST00000488631 SEC11AP67812 179 aa6.34□□□□□ -1.39
PDPN-206ENST00000488631 GAGE2BQ13066 116 aa6.34□□□□□ -1.39
PDPN-206ENST00000488631 SDIM1Q6ZPB5 146 aa6.34□□□□□ -1.39
PDPN-206ENST00000488631 ERASQ7Z444 233 aa6.34□□□□□ -1.39
PDPN-206ENST00000488631 BAGE3Q86Y29 109 aa6.34□□□□□ -1.39
PDPN-206ENST00000488631 CIRBP-AS1Q8TBR5 109 aa6.34□□□□□ -1.39
PDPN-206ENST00000488631 TOMM7Q9P0U1 55 aa6.34□□□□□ -1.39
PDPN-206ENST00000488631 IGIPA6NJ69 53 aa6.33□□□□□ -1.4
PDPN-206ENST00000488631 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.33□□□□□ -1.4
PDPN-206ENST00000488631 INAFM2P0DMQ5 153 aa6.33□□□□□ -1.4
PDPN-206ENST00000488631 UBE2D1P51668 147 aa6.33□□□□□ -1.4
PDPN-206ENST00000488631 RPL18AQ02543 176 aaKnown RBP6.33□□□□□ -1.4
PDPN-206ENST00000488631 LINC00242Q5T6M2 205 aa6.33□□□□□ -1.4
PDPN-206ENST00000488631 OR10D4PQ8NGN7 298 aa6.33□□□□□ -1.4
PDPN-206ENST00000488631 TIMM17AQ99595 171 aa6.33□□□□□ -1.4
PDPN-206ENST00000488631 TMA7Q9Y2S6 64 aaKnown RBP6.33□□□□□ -1.4
PDPN-206ENST00000488631 NDUFA1O15239 70 aa6.32□□□□□ -1.4
PDPN-206ENST00000488631 HBDP02042 147 aa6.32□□□□□ -1.4
PDPN-206ENST00000488631 NPSP0C0P6 89 aa6.32□□□□□ -1.4
PDPN-206ENST00000488631 CKS1BP61024 79 aa6.32□□□□□ -1.4
PDPN-206ENST00000488631 HERVK_113P63121 156 aa6.32□□□□□ -1.4
PDPN-206ENST00000488631 PMCHL1Q16048 86 aa6.32□□□□□ -1.4
PDPN-206ENST00000488631 Q6ZSA8 131 aa6.32□□□□□ -1.4
PDPN-206ENST00000488631 LINC00469Q8N7U9 141 aa6.32□□□□□ -1.4
PDPN-206ENST00000488631 C18orf32Q8TCD1 76 aa6.32□□□□□ -1.4
PDPN-206ENST00000488631 C2orf48Q96LS8 159 aa6.32□□□□□ -1.4
PDPN-206ENST00000488631 KRTAP4-5Q9BYR2 181 aa6.32□□□□□ -1.4
PDPN-206ENST00000488631 IGHV3OR16-9A0A0B4J2B5 98 aa6.31□□□□□ -1.4
PDPN-206ENST00000488631 A0A0J9YXV3 536 aa6.31□□□□□ -1.4
PDPN-206ENST00000488631 LOC107984640A0A0U1RRK4 108 aa6.31□□□□□ -1.4
PDPN-206ENST00000488631 C6orf226Q5I0X4 101 aa6.31□□□□□ -1.4
PDPN-206ENST00000488631 Q6ZRU5 148 aa6.31□□□□□ -1.4
PDPN-206ENST00000488631 STPG4Q8N801 248 aa6.31□□□□□ -1.4
PDPN-206ENST00000488631 FAM104AQ969W3 186 aa6.31□□□□□ -1.4
PDPN-206ENST00000488631 AMELXQ99217 191 aa6.31□□□□□ -1.4
PDPN-206ENST00000488631 LINC00474Q9P2X8 69 aa6.31□□□□□ -1.4
PDPN-206ENST00000488631 A0A087WZ39 114 aa6.3□□□□□ -1.4
PDPN-206ENST00000488631 PMVKQ15126 192 aa6.3□□□□□ -1.4
PDPN-206ENST00000488631 C7orf33Q8WU49 177 aa6.3□□□□□ -1.4
PDPN-206ENST00000488631 A0A087WYN8 130 aa6.29□□□□□ -1.4
PDPN-206ENST00000488631 A0A096LNI7 61 aa6.29□□□□□ -1.4
PDPN-206ENST00000488631 H3BRM9 83 aa6.29□□□□□ -1.4
PDPN-206ENST00000488631 PANO1I0J062 215 aa6.29□□□□□ -1.4
PDPN-206ENST00000488631 HSBP1O75506 76 aa6.29□□□□□ -1.4
PDPN-206ENST00000488631 ATP5LO75964 103 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms