RNA–Protein interactions for RNA: ENST00000487890.5

GPNMB-212, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-212ENST00000487890 NUP35Q8NFH5 326 aa2.07□□□□□ -2.08
GPNMB-212ENST00000487890 OR10P1Q8NGE3 313 aa2.07□□□□□ -2.08
GPNMB-212ENST00000487890 APLNQ9ULZ1 77 aa2.07□□□□□ -2.08
GPNMB-212ENST00000487890 FUT9Q9Y231 359 aa2.07□□□□□ -2.08
GPNMB-212ENST00000487890 RYR1P21817 5038 aa2.06□□□□□ -2.08
GPNMB-212ENST00000487890 TRAV8-1A0A0A6YYK1 113 aa2.06□□□□□ -2.08
GPNMB-212ENST00000487890 UBE2L5PA0A1B0GUS4 154 aa2.06□□□□□ -2.08
GPNMB-212ENST00000487890 ZNF705FA8MVS1 300 aaPredicted RBP2.06□□□□□ -2.08
GPNMB-212ENST00000487890 COX7A2LO14548 114 aa2.06□□□□□ -2.08
GPNMB-212ENST00000487890 CST7O76096 145 aa2.06□□□□□ -2.08
GPNMB-212ENST00000487890 TRGC2P03986 189 aa2.06□□□□□ -2.08
GPNMB-212ENST00000487890 PRM2P04554 102 aa2.06□□□□□ -2.08
GPNMB-212ENST00000487890 FOXA3P55318 350 aaPredicted RBP2.06□□□□□ -2.08
GPNMB-212ENST00000487890 KHDC3LQ587J8 217 aa2.06□□□□□ -2.08
GPNMB-212ENST00000487890 C10orf113Q5VZT2 155 aa2.06□□□□□ -2.08
GPNMB-212ENST00000487890 ALKAL2Q6UX46 152 aa2.06□□□□□ -2.08
GPNMB-212ENST00000487890 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.06□□□□□ -2.08
GPNMB-212ENST00000487890 PRR15Q8IV56 129 aa2.06□□□□□ -2.08
GPNMB-212ENST00000487890 MIEN1Q9BRT3 115 aa2.06□□□□□ -2.08
GPNMB-212ENST00000487890 SHANK2-AS3Q9BTD1 123 aa2.06□□□□□ -2.08
GPNMB-212ENST00000487890 CHCHD7Q9BUK0 85 aa2.06□□□□□ -2.08
GPNMB-212ENST00000487890 VAMP8Q9BV40 100 aa2.06□□□□□ -2.08
GPNMB-212ENST00000487890 WDR61Q9GZS3 305 aaKnown RBP2.06□□□□□ -2.08
GPNMB-212ENST00000487890 ZNF586Q9NXT0 402 aa2.06□□□□□ -2.08
GPNMB-212ENST00000487890 ANAPC11Q9NYG5 84 aa2.06□□□□□ -2.08
GPNMB-212ENST00000487890 DNAH17Q9UFH2 4485 aa2.05□□□□□ -2.08
GPNMB-212ENST00000487890 FAM24AA6NFZ4 105 aa2.05□□□□□ -2.08
GPNMB-212ENST00000487890 COLCA2A8K830 154 aa2.05□□□□□ -2.08
GPNMB-212ENST00000487890 B4DEV8 164 aa2.05□□□□□ -2.08
GPNMB-212ENST00000487890 LYRM1O43325 122 aa2.05□□□□□ -2.08
GPNMB-212ENST00000487890 ZNF73O43830 326 aaPredicted RBP2.05□□□□□ -2.08
GPNMB-212ENST00000487890 APOMO95445 188 aa2.05□□□□□ -2.08
GPNMB-212ENST00000487890 CXCL1P09341 107 aa2.05□□□□□ -2.08
GPNMB-212ENST00000487890 DNAH10OSP0CZ25 163 aa2.05□□□□□ -2.08
GPNMB-212ENST00000487890 FABP2P12104 132 aa2.05□□□□□ -2.08
GPNMB-212ENST00000487890 PEA15Q15121 130 aa2.05□□□□□ -2.08
GPNMB-212ENST00000487890 LINC00305Q7Z4B0 112 aa2.05□□□□□ -2.08
GPNMB-212ENST00000487890 BPIFA4PQ86YQ2 179 aa2.05□□□□□ -2.08
GPNMB-212ENST00000487890 HIST3H2BBQ8N257 126 aa2.05□□□□□ -2.08
GPNMB-212ENST00000487890 C15orf53Q8NAA6 179 aa2.05□□□□□ -2.08
GPNMB-212ENST00000487890 OR8A1Q8NGG7 326 aa2.05□□□□□ -2.08
GPNMB-212ENST00000487890 OR5C1Q8NGR4 320 aa2.05□□□□□ -2.08
GPNMB-212ENST00000487890 GNPNAT1Q96EK6 184 aaPredicted RBP2.05□□□□□ -2.08
GPNMB-212ENST00000487890 MGST2Q99735 147 aa2.05□□□□□ -2.08
GPNMB-212ENST00000487890 SLC50A1Q9BRV3 221 aa2.05□□□□□ -2.08
GPNMB-212ENST00000487890 EIF5A2Q9GZV4 153 aaKnown RBP2.05□□□□□ -2.08
GPNMB-212ENST00000487890 MED28Q9H204 178 aa2.05□□□□□ -2.08
GPNMB-212ENST00000487890 NPVFQ9HCQ7 196 aa2.05□□□□□ -2.08
GPNMB-212ENST00000487890 NOP10Q9NPE3 64 aaKnown RBP2.05□□□□□ -2.08
GPNMB-212ENST00000487890 TIMM9Q9Y5J7 89 aa2.05□□□□□ -2.08
GPNMB-212ENST00000487890 TIMM8BQ9Y5J9 83 aaPredicted RBP2.05□□□□□ -2.08
GPNMB-212ENST00000487890 SRRM2Q9UQ35 2752 aaKnown RBP2.05□□□□□ -2.08
GPNMB-212ENST00000487890 TRBV20OR9-2A0A075B6H5 130 aa2.04□□□□□ -2.08
GPNMB-212ENST00000487890 TRGV2A0A075B6R0 118 aa2.04□□□□□ -2.08
GPNMB-212ENST00000487890 TRAV9-1A0A075B6T8 112 aa2.04□□□□□ -2.08
GPNMB-212ENST00000487890 TRAV12-3A0A0B4J271 114 aa2.04□□□□□ -2.08
GPNMB-212ENST00000487890 MUC21A0A0G2JKD1 596 aa2.04□□□□□ -2.08
GPNMB-212ENST00000487890 A0A0J9YY99 117 aa2.04□□□□□ -2.08
GPNMB-212ENST00000487890 C7orf66A4D0T2 115 aa2.04□□□□□ -2.08
GPNMB-212ENST00000487890 A8MU10 97 aa2.04□□□□□ -2.08
GPNMB-212ENST00000487890 A8MWL6 223 aa2.04□□□□□ -2.08
GPNMB-212ENST00000487890 K7ERJ3 54 aa2.04□□□□□ -2.08
GPNMB-212ENST00000487890 TAX1BP3O14907 124 aa2.04□□□□□ -2.08
GPNMB-212ENST00000487890 MT-ND6P03923 174 aa2.04□□□□□ -2.08
GPNMB-212ENST00000487890 TCRAP04437 139 aa2.04□□□□□ -2.08
GPNMB-212ENST00000487890 RNASE4P34096 147 aaKnown RBP2.04□□□□□ -2.08
GPNMB-212ENST00000487890 CCL18P55774 89 aa2.04□□□□□ -2.08
GPNMB-212ENST00000487890 TDRG1Q3Y452 100 aa2.04□□□□□ -2.08
GPNMB-212ENST00000487890 LINC00483Q53H64 154 aa2.04□□□□□ -2.08
GPNMB-212ENST00000487890 C1orf134Q5TEV5 83 aa2.04□□□□□ -2.08
GPNMB-212ENST00000487890 MIC13Q5XKP0 118 aa2.04□□□□□ -2.08
GPNMB-212ENST00000487890 MRPL54Q6P161 138 aaKnown RBP2.04□□□□□ -2.08
GPNMB-212ENST00000487890 AMTNQ6UX39 209 aa2.04□□□□□ -2.08
GPNMB-212ENST00000487890 PATE2Q6UY27 113 aa2.04□□□□□ -2.08
GPNMB-212ENST00000487890 Q6ZUT4 128 aa2.04□□□□□ -2.08
GPNMB-212ENST00000487890 KRTAP11-1Q8IUC1 163 aa2.04□□□□□ -2.08
GPNMB-212ENST00000487890 SVBPQ8N300 66 aa2.04□□□□□ -2.08
GPNMB-212ENST00000487890 C10orf126Q8N4M7 172 aa2.04□□□□□ -2.08
GPNMB-212ENST00000487890 ZNF431Q8TF32 576 aaPredicted RBP2.04□□□□□ -2.08
GPNMB-212ENST00000487890 C2orf50Q96LR7 162 aa2.04□□□□□ -2.08
GPNMB-212ENST00000487890 MRPL32Q9BYC8 188 aaKnown RBP2.04□□□□□ -2.08
GPNMB-212ENST00000487890 TMEM191AQ9H0A3 160 aa2.04□□□□□ -2.08
GPNMB-212ENST00000487890 SLC39A9Q9NUM3 307 aa2.04□□□□□ -2.08
GPNMB-212ENST00000487890 LAMTOR3Q9UHA4 124 aa2.04□□□□□ -2.08
GPNMB-212ENST00000487890 IGKV2-40A0A087WW87 121 aaPredicted RBP2.03□□□□□ -2.08
GPNMB-212ENST00000487890 TRGV1A0A0A0MS02 117 aa2.03□□□□□ -2.08
GPNMB-212ENST00000487890 A8MTW9 85 aa2.03□□□□□ -2.08
GPNMB-212ENST00000487890 ZNF727A8MUV8 499 aa2.03□□□□□ -2.08
GPNMB-212ENST00000487890 C16orf90A8MZG2 172 aa2.03□□□□□ -2.08
GPNMB-212ENST00000487890 TMEM250H0YL14 139 aa2.03□□□□□ -2.08
GPNMB-212ENST00000487890 H3BQ15 152 aa2.03□□□□□ -2.08
GPNMB-212ENST00000487890 TMEM256-PLSCR3K7ERE1 68 aa2.03□□□□□ -2.08
GPNMB-212ENST00000487890 M0R3E3 92 aa2.03□□□□□ -2.08
GPNMB-212ENST00000487890 RTL8CO15255 209 aa2.03□□□□□ -2.08
GPNMB-212ENST00000487890 PLA2G10O15496 165 aa2.03□□□□□ -2.08
GPNMB-212ENST00000487890 SIX6O95475 246 aa2.03□□□□□ -2.08
GPNMB-212ENST00000487890 NCR2O95944 276 aa2.03□□□□□ -2.08
GPNMB-212ENST00000487890 IGKV2D-40P01614 121 aaPredicted RBP2.03□□□□□ -2.08
GPNMB-212ENST00000487890 IGHV3-53P01767 116 aa2.03□□□□□ -2.08
GPNMB-212ENST00000487890 MT-ATP8P03928 68 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms