RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 ISOC2Q96AB3 205 aa3.64□□□□□ -1.83
CSDE1-207ENST00000483407 CARD19Q96LW7 228 aa3.64□□□□□ -1.83
CSDE1-207ENST00000483407 CNFNQ9BYD5 112 aa3.64□□□□□ -1.83
CSDE1-207ENST00000483407 MED9Q9NWA0 146 aa3.64□□□□□ -1.83
CSDE1-207ENST00000483407 PKHD1L1Q86WI1 4243 aa3.64□□□□□ -1.83
CSDE1-207ENST00000483407 A0A0U1RRA0 63 aa3.63□□□□□ -1.83
CSDE1-207ENST00000483407 LINC00959A0A1B0GUT2 108 aa3.63□□□□□ -1.83
CSDE1-207ENST00000483407 FAM231BA6NCW3 169 aa3.63□□□□□ -1.83
CSDE1-207ENST00000483407 SDHAF1A6NFY7 115 aa3.63□□□□□ -1.83
CSDE1-207ENST00000483407 IFITM10A6NMD0 228 aa3.63□□□□□ -1.83
CSDE1-207ENST00000483407 I3L3M4 83 aa3.63□□□□□ -1.83
CSDE1-207ENST00000483407 CCL25O15444 150 aa3.63□□□□□ -1.83
CSDE1-207ENST00000483407 PMCHP20382 165 aa3.63□□□□□ -1.83
CSDE1-207ENST00000483407 SYCNQ0VAF6 134 aa3.63□□□□□ -1.83
CSDE1-207ENST00000483407 SS18Q15532 418 aa3.63□□□□□ -1.83
CSDE1-207ENST00000483407 ADAMTSL4-AS1Q5T5F5 129 aa3.63□□□□□ -1.83
CSDE1-207ENST00000483407 NOTCH2NLQ7Z3S9 236 aa3.63□□□□□ -1.83
CSDE1-207ENST00000483407 RPL39LQ96EH5 51 aaKnown RBP3.63□□□□□ -1.83
CSDE1-207ENST00000483407 FAM210AQ96ND0 272 aa3.63□□□□□ -1.83
CSDE1-207ENST00000483407 RPP21Q9H633 154 aaKnown RBP3.63□□□□□ -1.83
CSDE1-207ENST00000483407 TRBV20OR9-2A0A075B6H5 130 aa3.62□□□□□ -1.83
CSDE1-207ENST00000483407 A0A087X002 238 aa3.62□□□□□ -1.83
CSDE1-207ENST00000483407 LOC107984640A0A0U1RRK4 108 aa3.62□□□□□ -1.83
CSDE1-207ENST00000483407 BCL2P10415 239 aa3.62□□□□□ -1.83
CSDE1-207ENST00000483407 TAGLN2P37802 199 aaKnown RBP3.62□□□□□ -1.83
CSDE1-207ENST00000483407 LINC00526Q96FQ7 95 aa3.62□□□□□ -1.83
CSDE1-207ENST00000483407 MRAP2Q96G30 205 aa3.62□□□□□ -1.83
CSDE1-207ENST00000483407 LITAFQ99732 161 aa3.62□□□□□ -1.83
CSDE1-207ENST00000483407 FSIP2Q5CZC0 6907 aa3.61□□□□□ -1.83
CSDE1-207ENST00000483407 IGLV4-69A0A075B6H9 119 aa3.61□□□□□ -1.83
CSDE1-207ENST00000483407 TRBV6-5A0A0K0K1A5 114 aa3.61□□□□□ -1.83
CSDE1-207ENST00000483407 GAS8-AS1O95177 125 aa3.61□□□□□ -1.83
CSDE1-207ENST00000483407 MT-ND6P03923 174 aa3.61□□□□□ -1.83
CSDE1-207ENST00000483407 SMAGPQ0VAQ4 97 aa3.61□□□□□ -1.83
CSDE1-207ENST00000483407 RIGQ13278 110 aa3.61□□□□□ -1.83
CSDE1-207ENST00000483407 ZNF664Q8N3J9 261 aa3.61□□□□□ -1.83
CSDE1-207ENST00000483407 BORCS7Q96B45 105 aa3.61□□□□□ -1.83
CSDE1-207ENST00000483407 RNASE7Q9H1E1 156 aaKnown RBP3.61□□□□□ -1.83
CSDE1-207ENST00000483407 ST20Q9HBF5 79 aa3.61□□□□□ -1.83
CSDE1-207ENST00000483407 C7orf77A4D0Y5 90 aa3.6□□□□□ -1.83
CSDE1-207ENST00000483407 A8MWL6 223 aa3.6□□□□□ -1.83
CSDE1-207ENST00000483407 C1orf196B1AJZ1 125 aa3.6□□□□□ -1.83
CSDE1-207ENST00000483407 COX7A2LO14548 114 aa3.6□□□□□ -1.83
CSDE1-207ENST00000483407 GATCO43716 136 aaKnown RBP3.6□□□□□ -1.83
CSDE1-207ENST00000483407 APOMO95445 188 aa3.6□□□□□ -1.83
CSDE1-207ENST00000483407 ESDP10768 282 aa3.6□□□□□ -1.83
CSDE1-207ENST00000483407 FOXA3P55318 350 aaPredicted RBP3.6□□□□□ -1.83
CSDE1-207ENST00000483407 MRPL52Q86TS9 123 aaKnown RBP3.6□□□□□ -1.83
CSDE1-207ENST00000483407 CAMK2N2Q96S95 79 aa3.6□□□□□ -1.83
CSDE1-207ENST00000483407 CDC42SE2Q9NRR3 84 aa3.6□□□□□ -1.83
CSDE1-207ENST00000483407 TMEM242Q9NWH2 141 aa3.6□□□□□ -1.83
CSDE1-207ENST00000483407 PSORS1C2Q9UIG4 136 aa3.6□□□□□ -1.83
CSDE1-207ENST00000483407 TNXBP22105 4242 aa3.6□□□□□ -1.83
CSDE1-207ENST00000483407 TRBV27A0A0K0K1C4 114 aa3.59□□□□□ -1.83
CSDE1-207ENST00000483407 A0A1W2PNN7 141 aa3.59□□□□□ -1.83
CSDE1-207ENST00000483407 K7EN84 100 aa3.59□□□□□ -1.83
CSDE1-207ENST00000483407 FCER1GP30273 86 aa3.59□□□□□ -1.83
CSDE1-207ENST00000483407 RPL18AQ02543 176 aaKnown RBP3.59□□□□□ -1.83
CSDE1-207ENST00000483407 C9orf116Q5BN46 136 aaPredicted RBP3.59□□□□□ -1.83
CSDE1-207ENST00000483407 C1orf137Q5JT78 98 aa3.59□□□□□ -1.83
CSDE1-207ENST00000483407 KRTAP5-11Q6L8G4 156 aa3.59□□□□□ -1.83
CSDE1-207ENST00000483407 NUP35Q8NFH5 326 aa3.59□□□□□ -1.83
CSDE1-207ENST00000483407 TSKUQ8WUA8 353 aa3.59□□□□□ -1.83
CSDE1-207ENST00000483407 DIRC1Q969H9 104 aa3.59□□□□□ -1.83
CSDE1-207ENST00000483407 TRAV13-1A0A0B4J241 112 aa3.58□□□□□ -1.84
CSDE1-207ENST00000483407 F8WDY8 70 aa3.58□□□□□ -1.84
CSDE1-207ENST00000483407 PPP1R17O96001 155 aa3.58□□□□□ -1.84
CSDE1-207ENST00000483407 CFC1BP0CG36 223 aa3.58□□□□□ -1.84
CSDE1-207ENST00000483407 CFC1P0CG37 223 aa3.58□□□□□ -1.84
CSDE1-207ENST00000483407 POLR2KP53803 58 aaKnown RBP3.58□□□□□ -1.84
CSDE1-207ENST00000483407 KRTAP10-7P60409 375 aaPredicted RBP3.58□□□□□ -1.84
CSDE1-207ENST00000483407 FAM231DQ6ZW35 169 aa3.58□□□□□ -1.84
CSDE1-207ENST00000483407 TMEM191AQ9H0A3 160 aa3.58□□□□□ -1.84
CSDE1-207ENST00000483407 CSDC2Q9Y534 153 aaKnown RBP3.58□□□□□ -1.84
CSDE1-207ENST00000483407 A0A1B0GUT8 65 aa3.57□□□□□ -1.84
CSDE1-207ENST00000483407 TMEM250H0YL14 139 aa3.57□□□□□ -1.84
CSDE1-207ENST00000483407 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.57□□□□□ -1.84
CSDE1-207ENST00000483407 SPAG11BQ08648 103 aa3.57□□□□□ -1.84
CSDE1-207ENST00000483407 PHF5AQ7RTV0 110 aaKnown RBP3.57□□□□□ -1.84
CSDE1-207ENST00000483407 C5orf38Q86SI9 138 aa3.57□□□□□ -1.84
CSDE1-207ENST00000483407 SLC51BQ86UW2 128 aa3.57□□□□□ -1.84
CSDE1-207ENST00000483407 IMMP2LQ96T52 175 aa3.57□□□□□ -1.84
CSDE1-207ENST00000483407 KIR2DL4Q99706 377 aa3.57□□□□□ -1.84
CSDE1-207ENST00000483407 UBE2D4Q9Y2X8 147 aa3.57□□□□□ -1.84
CSDE1-207ENST00000483407 HIGD1CA8MV81 97 aa3.56□□□□□ -1.84
CSDE1-207ENST00000483407 H0Y9J4 135 aa3.56□□□□□ -1.84
CSDE1-207ENST00000483407 PPP1R2P9O14990 202 aa3.56□□□□□ -1.84
CSDE1-207ENST00000483407 IGLV7-43P04211 117 aa3.56□□□□□ -1.84
CSDE1-207ENST00000483407 RAB4AP20338 218 aa3.56□□□□□ -1.84
CSDE1-207ENST00000483407 CEBPGP53567 150 aa3.56□□□□□ -1.84
CSDE1-207ENST00000483407 RNASE13Q5GAN3 156 aaKnown RBP3.56□□□□□ -1.84
CSDE1-207ENST00000483407 AMN1Q8IY45 258 aa3.56□□□□□ -1.84
CSDE1-207ENST00000483407 OR10D4PQ8NGN7 298 aa3.56□□□□□ -1.84
CSDE1-207ENST00000483407 OPRPNQ99935 248 aaPredicted RBP3.56□□□□□ -1.84
CSDE1-207ENST00000483407 MRPL35Q9NZE8 188 aaKnown RBP3.56□□□□□ -1.84
CSDE1-207ENST00000483407 IGLV1-50A0A075B6I6 118 aa3.55□□□□□ -1.84
CSDE1-207ENST00000483407 A0A0U1RQV1 116 aa3.55□□□□□ -1.84
CSDE1-207ENST00000483407 NDUFA1O15239 70 aa3.55□□□□□ -1.84
CSDE1-207ENST00000483407 TCAPO15273 167 aa3.55□□□□□ -1.84
CSDE1-207ENST00000483407 UBE2D1P51668 147 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms