RNA–Protein interactions for RNA: ENST00000475213.1

SSR1-205, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3

Gene SSR1, Length 446 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-205ENST00000475213 COX7A2LO14548 114 aa7.72□□□□□ -1.17
SSR1-205ENST00000475213 PPBPP02775 128 aa7.72□□□□□ -1.17
SSR1-205ENST00000475213 MALP21145 153 aa7.72□□□□□ -1.17
SSR1-205ENST00000475213 SYCNQ0VAF6 134 aa7.72□□□□□ -1.17
SSR1-205ENST00000475213 FAM104AQ969W3 186 aa7.72□□□□□ -1.17
SSR1-205ENST00000475213 RAB14P61106 215 aa7.71□□□□□ -1.18
SSR1-205ENST00000475213 PNRC1Q12796 327 aaPredicted RBP7.71□□□□□ -1.18
SSR1-205ENST00000475213 ORMDL3Q8N138 153 aa7.71□□□□□ -1.18
SSR1-205ENST00000475213 STPG4Q8N801 248 aa7.71□□□□□ -1.18
SSR1-205ENST00000475213 IGLV4-69A0A075B6H9 119 aa7.7□□□□□ -1.18
SSR1-205ENST00000475213 TMEM136Q6ZRR5 245 aa7.7□□□□□ -1.18
SSR1-205ENST00000475213 C5orf38Q86SI9 138 aa7.7□□□□□ -1.18
SSR1-205ENST00000475213 C7orf33Q8WU49 177 aa7.7□□□□□ -1.18
SSR1-205ENST00000475213 ANAPC16Q96DE5 110 aa7.7□□□□□ -1.18
SSR1-205ENST00000475213 PRELID3AQ96N28 172 aa7.7□□□□□ -1.18
SSR1-205ENST00000475213 OPRPNQ99935 248 aaPredicted RBP7.7□□□□□ -1.18
SSR1-205ENST00000475213 SPANXA1Q9NS26 97 aa7.7□□□□□ -1.18
SSR1-205ENST00000475213 LINC00474Q9P2X8 69 aa7.7□□□□□ -1.18
SSR1-205ENST00000475213 PKIGQ9Y2B9 76 aa7.7□□□□□ -1.18
SSR1-205ENST00000475213 MT-ND4LP03901 98 aa7.69□□□□□ -1.18
SSR1-205ENST00000475213 MRPS36P82909 103 aaKnown RBP7.69□□□□□ -1.18
SSR1-205ENST00000475213 Q6ZRU5 148 aa7.69□□□□□ -1.18
SSR1-205ENST00000475213 CAMK2N2Q96S95 79 aa7.68□□□□□ -1.18
SSR1-205ENST00000475213 PRSS47A8MTI9 375 aa7.67□□□□□ -1.18
SSR1-205ENST00000475213 APOMO95445 188 aa7.67□□□□□ -1.18
SSR1-205ENST00000475213 RAB5AP20339 215 aa7.67□□□□□ -1.18
SSR1-205ENST00000475213 PTTG1IPP53801 180 aa7.67□□□□□ -1.18
SSR1-205ENST00000475213 CLLU1Q5K131 121 aa7.67□□□□□ -1.18
SSR1-205ENST00000475213 C2orf48Q96LS8 159 aa7.67□□□□□ -1.18
SSR1-205ENST00000475213 IGHV3OR16-9A0A0B4J2B5 98 aa7.66□□□□□ -1.18
SSR1-205ENST00000475213 LOC107984640A0A0U1RRK4 108 aa7.66□□□□□ -1.18
SSR1-205ENST00000475213 LOC389332A0A1B0GUA5 103 aa7.66□□□□□ -1.18
SSR1-205ENST00000475213 IFITM10A6NMD0 228 aa7.66□□□□□ -1.18
SSR1-205ENST00000475213 SPAG11BQ08648 103 aa7.66□□□□□ -1.18
SSR1-205ENST00000475213 LCE4AQ5TA78 99 aa7.66□□□□□ -1.18
SSR1-205ENST00000475213 LAMTOR2Q9Y2Q5 125 aa7.66□□□□□ -1.18
SSR1-205ENST00000475213 IFI27P40305 119 aaPredicted RBP7.65□□□□□ -1.18
SSR1-205ENST00000475213 PRR3P79522 188 aaKnown RBP7.65□□□□□ -1.18
SSR1-205ENST00000475213 GAGE2BQ13066 116 aa7.65□□□□□ -1.18
SSR1-205ENST00000475213 SERTAD4-AS1Q5TG53 156 aa7.65□□□□□ -1.18
SSR1-205ENST00000475213 OR10D4PQ8NGN7 298 aa7.65□□□□□ -1.18
SSR1-205ENST00000475213 KRTAP4-7Q9BYR0 210 aa7.65□□□□□ -1.18
SSR1-205ENST00000475213 MAP1LC3AQ9H492 121 aa7.65□□□□□ -1.18
SSR1-205ENST00000475213 PYGO1Q9Y3Y4 419 aa7.65□□□□□ -1.18
SSR1-205ENST00000475213 IGLV4-3A0A075B6K6 122 aa7.64□□□□□ -1.19
SSR1-205ENST00000475213 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.64□□□□□ -1.19
SSR1-205ENST00000475213 MT1HL1P0DM35 61 aa7.64□□□□□ -1.19
SSR1-205ENST00000475213 ORAOV1Q8WV07 137 aa7.64□□□□□ -1.19
SSR1-205ENST00000475213 A0A0J9YXV3 536 aa7.63□□□□□ -1.19
SSR1-205ENST00000475213 ADCYAP1P18509 176 aa7.63□□□□□ -1.19
SSR1-205ENST00000475213 RNF151Q2KHN1 245 aa7.63□□□□□ -1.19
SSR1-205ENST00000475213 Q8N8P6 123 aa7.63□□□□□ -1.19
SSR1-205ENST00000475213 A0A1W2PNN7 141 aa7.62□□□□□ -1.19
SSR1-205ENST00000475213 IFITM2Q01629 132 aa7.62□□□□□ -1.19
SSR1-205ENST00000475213 RPL18AQ02543 176 aaKnown RBP7.62□□□□□ -1.19
SSR1-205ENST00000475213 LINC00242Q5T6M2 205 aa7.62□□□□□ -1.19
SSR1-205ENST00000475213 TMEM141Q96I45 108 aa7.62□□□□□ -1.19
SSR1-205ENST00000475213 IMMP2LQ96T52 175 aa7.62□□□□□ -1.19
SSR1-205ENST00000475213 TGIF2-C20orf24A0A0A6YYL0 155 aa7.61□□□□□ -1.19
SSR1-205ENST00000475213 TMEM218A2RU14 115 aa7.61□□□□□ -1.19
SSR1-205ENST00000475213 F8WDY8 70 aa7.61□□□□□ -1.19
SSR1-205ENST00000475213 UQCC3Q6UW78 93 aa7.61□□□□□ -1.19
SSR1-205ENST00000475213 C2orf66Q6UXQ4 117 aa7.61□□□□□ -1.19
SSR1-205ENST00000475213 CTDSP1Q9GZU7 261 aa7.61□□□□□ -1.19
SSR1-205ENST00000475213 MRPL35Q9NZE8 188 aaKnown RBP7.61□□□□□ -1.19
SSR1-205ENST00000475213 CYSLTR1Q9Y271 337 aa7.61□□□□□ -1.19
SSR1-205ENST00000475213 HMCN2Q8NDA2 5059 aa7.61□□□□□ -1.19
SSR1-205ENST00000475213 TNXBP22105 4242 aa7.61□□□□□ -1.19
SSR1-205ENST00000475213 A0A087WZ39 114 aa7.6□□□□□ -1.19
SSR1-205ENST00000475213 NDUFA1O15239 70 aa7.6□□□□□ -1.19
SSR1-205ENST00000475213 UBE2D1P51668 147 aa7.6□□□□□ -1.19
SSR1-205ENST00000475213 ORMDL2Q53FV1 153 aa7.6□□□□□ -1.19
SSR1-205ENST00000475213 C9orf116Q5BN46 136 aaPredicted RBP7.6□□□□□ -1.19
SSR1-205ENST00000475213 C10orf25Q5T742 122 aa7.6□□□□□ -1.19
SSR1-205ENST00000475213 TEX43Q6ZNM6 134 aa7.6□□□□□ -1.19
SSR1-205ENST00000475213 Q6ZRP5 223 aa7.6□□□□□ -1.19
SSR1-205ENST00000475213 K7EMI3 77 aa7.59□□□□□ -1.19
SSR1-205ENST00000475213 KIAA0087Q14695 138 aa7.59□□□□□ -1.19
SSR1-205ENST00000475213 ZC2HC1BQ5TFG8 222 aa7.59□□□□□ -1.19
SSR1-205ENST00000475213 UNQ6190/PRO20217Q6UXQ8 127 aa7.59□□□□□ -1.19
SSR1-205ENST00000475213 LINC00173Q6ZV60 143 aa7.59□□□□□ -1.19
SSR1-205ENST00000475213 AMELXQ99217 191 aa7.59□□□□□ -1.19
SSR1-205ENST00000475213 C2orf88Q9BSF0 95 aa7.59□□□□□ -1.19
SSR1-205ENST00000475213 NXT2Q9NPJ8 142 aaKnown RBP7.59□□□□□ -1.19
SSR1-205ENST00000475213 KRTAP19-4Q3LI73 84 aa7.58□□□□□ -1.2
SSR1-205ENST00000475213 KIAA1644Q3SXP7 199 aa7.58□□□□□ -1.2
SSR1-205ENST00000475213 SPINK6Q6UWN8 80 aa7.58□□□□□ -1.2
SSR1-205ENST00000475213 Q6ZN92 141 aa7.58□□□□□ -1.2
SSR1-205ENST00000475213 C6orf48Q9UBA6 75 aa7.58□□□□□ -1.2
SSR1-205ENST00000475213 PLA2G2DQ9UNK4 145 aa7.58□□□□□ -1.2
SSR1-205ENST00000475213 TRAV9-1A0A075B6T8 112 aa7.57□□□□□ -1.2
SSR1-205ENST00000475213 IGIPA6NJ69 53 aa7.57□□□□□ -1.2
SSR1-205ENST00000475213 NPSP0C0P6 89 aa7.57□□□□□ -1.2
SSR1-205ENST00000475213 TLX1NBP0CAT3 122 aa7.57□□□□□ -1.2
SSR1-205ENST00000475213 SRSF9Q13242 221 aaKnown RBP eCLIP7.57□□□□□ -1.2
SSR1-205ENST00000475213 LINC01600Q96MT4 127 aa7.57□□□□□ -1.2
SSR1-205ENST00000475213 SEC11CQ9BY50 192 aa7.57□□□□□ -1.2
SSR1-205ENST00000475213 VCX2Q9H322 139 aa7.57□□□□□ -1.2
SSR1-205ENST00000475213 PHF5AQ7RTV0 110 aaKnown RBP7.56□□□□□ -1.2
SSR1-205ENST00000475213 LINC01561Q8N1V8 128 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms