RNA–Protein interactions for RNA: ENST00000475043.5

PDPN-204, Transcript of podoplanin, humanhuman

TSL 3 BASIC

Gene PDPN, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-204ENST00000475043 SMIM2Q9BVW6 85 aa5.99□□□□□ -1.45
PDPN-204ENST00000475043 PLA2G2DQ9UNK4 145 aa5.99□□□□□ -1.45
PDPN-204ENST00000475043 VPS13BQ7Z7G8 4022 aa5.99□□□□□ -1.45
PDPN-204ENST00000475043 COX7A2LO14548 114 aa5.98□□□□□ -1.45
PDPN-204ENST00000475043 PPBPP02775 128 aa5.98□□□□□ -1.45
PDPN-204ENST00000475043 MT-ND4LP03901 98 aa5.98□□□□□ -1.45
PDPN-204ENST00000475043 RPL32P62910 135 aaKnown RBP5.98□□□□□ -1.45
PDPN-204ENST00000475043 PNRC1Q12796 327 aaPredicted RBP5.98□□□□□ -1.45
PDPN-204ENST00000475043 ATP5L2Q7Z4Y8 100 aa5.98□□□□□ -1.45
PDPN-204ENST00000475043 ORMDL3Q8N138 153 aa5.98□□□□□ -1.45
PDPN-204ENST00000475043 CARD19Q96LW7 228 aa5.98□□□□□ -1.45
PDPN-204ENST00000475043 TIMM21Q9BVV7 248 aa5.98□□□□□ -1.45
PDPN-204ENST00000475043 MYCBP2O75592 4640 aa5.97□□□□□ -1.45
PDPN-204ENST00000475043 A0A096LNI7 61 aa5.97□□□□□ -1.45
PDPN-204ENST00000475043 PHOX2AO14813 284 aa5.97□□□□□ -1.45
PDPN-204ENST00000475043 RAB5AP20339 215 aa5.97□□□□□ -1.45
PDPN-204ENST00000475043 HNRNPA3P51991 378 aaKnown RBP5.97□□□□□ -1.45
PDPN-204ENST00000475043 SYCNQ0VAF6 134 aa5.97□□□□□ -1.45
PDPN-204ENST00000475043 TMEM136Q6ZRR5 245 aa5.97□□□□□ -1.45
PDPN-204ENST00000475043 C5orf38Q86SI9 138 aa5.97□□□□□ -1.45
PDPN-204ENST00000475043 STPG4Q8N801 248 aa5.97□□□□□ -1.45
PDPN-204ENST00000475043 C7orf33Q8WU49 177 aa5.97□□□□□ -1.45
PDPN-204ENST00000475043 PRELID3AQ96N28 172 aa5.97□□□□□ -1.45
PDPN-204ENST00000475043 PLAC8Q9NZF1 115 aa5.97□□□□□ -1.45
PDPN-204ENST00000475043 PKIGQ9Y2B9 76 aa5.97□□□□□ -1.45
PDPN-204ENST00000475043 DMBT1Q9UGM3 2413 aaPredicted RBP5.97□□□□□ -1.45
PDPN-204ENST00000475043 IGLV4-69A0A075B6H9 119 aa5.96□□□□□ -1.46
PDPN-204ENST00000475043 OXTP01178 125 aa5.96□□□□□ -1.46
PDPN-204ENST00000475043 OPRPNQ99935 248 aaPredicted RBP5.96□□□□□ -1.46
PDPN-204ENST00000475043 SPANXA1Q9NS26 97 aa5.96□□□□□ -1.46
PDPN-204ENST00000475043 LOC389332A0A1B0GUA5 103 aa5.95□□□□□ -1.46
PDPN-204ENST00000475043 APOMO95445 188 aa5.95□□□□□ -1.46
PDPN-204ENST00000475043 CLLU1Q5K131 121 aa5.95□□□□□ -1.46
PDPN-204ENST00000475043 CAMK2N2Q96S95 79 aa5.95□□□□□ -1.46
PDPN-204ENST00000475043 MAP1LC3AQ9H492 121 aa5.95□□□□□ -1.46
PDPN-204ENST00000475043 LINC00474Q9P2X8 69 aa5.95□□□□□ -1.46
PDPN-204ENST00000475043 IFITM10A6NMD0 228 aa5.94□□□□□ -1.46
PDPN-204ENST00000475043 IFI27P40305 119 aaPredicted RBP5.94□□□□□ -1.46
PDPN-204ENST00000475043 GAGE2BQ13066 116 aa5.94□□□□□ -1.46
PDPN-204ENST00000475043 Q6ZRU5 148 aa5.94□□□□□ -1.46
PDPN-204ENST00000475043 HERC1Q15751 4861 aa5.93□□□□□ -1.46
PDPN-204ENST00000475043 LOC107984640A0A0U1RRK4 108 aa5.93□□□□□ -1.46
PDPN-204ENST00000475043 MRPS36P82909 103 aaKnown RBP5.93□□□□□ -1.46
PDPN-204ENST00000475043 SPAG11BQ08648 103 aa5.93□□□□□ -1.46
PDPN-204ENST00000475043 FAM104AQ969W3 186 aa5.93□□□□□ -1.46
PDPN-204ENST00000475043 LAMTOR2Q9Y2Q5 125 aa5.93□□□□□ -1.46
PDPN-204ENST00000475043 ORAOV1Q8WV07 137 aa5.92□□□□□ -1.46
PDPN-204ENST00000475043 C2orf48Q96LS8 159 aa5.92□□□□□ -1.46
PDPN-204ENST00000475043 CTDSP1Q9GZU7 261 aa5.92□□□□□ -1.46
PDPN-204ENST00000475043 IGLV4-3A0A075B6K6 122 aa5.91□□□□□ -1.46
PDPN-204ENST00000475043 TGIF2-C20orf24A0A0A6YYL0 155 aa5.91□□□□□ -1.46
PDPN-204ENST00000475043 IGHV3OR16-9A0A0B4J2B5 98 aa5.91□□□□□ -1.46
PDPN-204ENST00000475043 A0A0J9YXV3 536 aa5.91□□□□□ -1.46
PDPN-204ENST00000475043 PTTG1IPP53801 180 aa5.91□□□□□ -1.46
PDPN-204ENST00000475043 RPL18AQ02543 176 aaKnown RBP5.91□□□□□ -1.46
PDPN-204ENST00000475043 UQCC3Q6UW78 93 aa5.91□□□□□ -1.46
PDPN-204ENST00000475043 Q8N8P6 123 aa5.91□□□□□ -1.46
PDPN-204ENST00000475043 OR10D4PQ8NGN7 298 aa5.91□□□□□ -1.46
PDPN-204ENST00000475043 TMEM141Q96I45 108 aa5.91□□□□□ -1.46
PDPN-204ENST00000475043 PYGO1Q9Y3Y4 419 aa5.91□□□□□ -1.46
PDPN-204ENST00000475043 TMEM218A2RU14 115 aa5.9□□□□□ -1.46
PDPN-204ENST00000475043 ADCYAP1P18509 176 aa5.9□□□□□ -1.46
PDPN-204ENST00000475043 PRR3P79522 188 aaKnown RBP5.9□□□□□ -1.46
PDPN-204ENST00000475043 IFITM2Q01629 132 aa5.9□□□□□ -1.46
PDPN-204ENST00000475043 ORMDL2Q53FV1 153 aa5.9□□□□□ -1.46
PDPN-204ENST00000475043 C2orf66Q6UXQ4 117 aa5.9□□□□□ -1.46
PDPN-204ENST00000475043 Q6ZN92 141 aa5.9□□□□□ -1.46
PDPN-204ENST00000475043 TEX43Q6ZNM6 134 aa5.9□□□□□ -1.46
PDPN-204ENST00000475043 IMMP2LQ96T52 175 aa5.9□□□□□ -1.46
PDPN-204ENST00000475043 CYSLTR1Q9Y271 337 aa5.9□□□□□ -1.46
PDPN-204ENST00000475043 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.89□□□□□ -1.47
PDPN-204ENST00000475043 NDUFA1O15239 70 aa5.89□□□□□ -1.47
PDPN-204ENST00000475043 SERTAD4-AS1Q5TG53 156 aa5.89□□□□□ -1.47
PDPN-204ENST00000475043 C2orf88Q9BSF0 95 aa5.89□□□□□ -1.47
PDPN-204ENST00000475043 NXT2Q9NPJ8 142 aaKnown RBP5.89□□□□□ -1.47
PDPN-204ENST00000475043 K7EMI3 77 aa5.88□□□□□ -1.47
PDPN-204ENST00000475043 S100PP25815 95 aa5.88□□□□□ -1.47
PDPN-204ENST00000475043 KIAA1644Q3SXP7 199 aa5.88□□□□□ -1.47
PDPN-204ENST00000475043 LINC00242Q5T6M2 205 aa5.88□□□□□ -1.47
PDPN-204ENST00000475043 ZC2HC1BQ5TFG8 222 aa5.88□□□□□ -1.47
PDPN-204ENST00000475043 VCX2Q9H322 139 aa5.88□□□□□ -1.47
PDPN-204ENST00000475043 MRPL35Q9NZE8 188 aaKnown RBP5.88□□□□□ -1.47
PDPN-204ENST00000475043 LRP1Q07954 4544 aaKnown RBP5.87□□□□□ -1.47
PDPN-204ENST00000475043 A0A087WZ39 114 aa5.87□□□□□ -1.47
PDPN-204ENST00000475043 A0A1W2PNN7 141 aa5.87□□□□□ -1.47
PDPN-204ENST00000475043 F8WDY8 70 aa5.87□□□□□ -1.47
PDPN-204ENST00000475043 UBE2D1P51668 147 aa5.87□□□□□ -1.47
PDPN-204ENST00000475043 RNF151Q2KHN1 245 aa5.87□□□□□ -1.47
PDPN-204ENST00000475043 C9orf116Q5BN46 136 aaPredicted RBP5.87□□□□□ -1.47
PDPN-204ENST00000475043 C10orf25Q5T742 122 aa5.87□□□□□ -1.47
PDPN-204ENST00000475043 UNQ6190/PRO20217Q6UXQ8 127 aa5.87□□□□□ -1.47
PDPN-204ENST00000475043 Q6ZRP5 223 aa5.87□□□□□ -1.47
PDPN-204ENST00000475043 COMMD7Q86VX2 200 aa5.87□□□□□ -1.47
PDPN-204ENST00000475043 SEC11CQ9BY50 192 aa5.87□□□□□ -1.47
PDPN-204ENST00000475043 TRAV9-1A0A075B6T8 112 aa5.86□□□□□ -1.47
PDPN-204ENST00000475043 G0S2P27469 103 aa5.86□□□□□ -1.47
PDPN-204ENST00000475043 IGIPA6NJ69 53 aa5.85□□□□□ -1.47
PDPN-204ENST00000475043 PRSS2P07478 247 aa5.85□□□□□ -1.47
PDPN-204ENST00000475043 NPSP0C0P6 89 aa5.85□□□□□ -1.47
PDPN-204ENST00000475043 GAGE2EQ4V326 116 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms