RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 A0A096LNI7 61 aa10.8□□□□□ -0.68
SSBP1-207ENST00000468267 HNRNPA3P51991 378 aaKnown RBP10.8□□□□□ -0.68
SSBP1-207ENST00000468267 C5orf38Q86SI9 138 aa10.8□□□□□ -0.68
SSBP1-207ENST00000468267 PKIGQ9Y2B9 76 aa10.8□□□□□ -0.68
SSBP1-207ENST00000468267 IGLV4-69A0A075B6H9 119 aa10.79□□□□□ -0.68
SSBP1-207ENST00000468267 LOC389332A0A1B0GUA5 103 aa10.79□□□□□ -0.68
SSBP1-207ENST00000468267 TMEM218A2RU14 115 aa10.79□□□□□ -0.68
SSBP1-207ENST00000468267 OXTP01178 125 aa10.79□□□□□ -0.68
SSBP1-207ENST00000468267 ADCYAP1P18509 176 aa10.79□□□□□ -0.68
SSBP1-207ENST00000468267 IMMP2LQ96T52 175 aa10.79□□□□□ -0.68
SSBP1-207ENST00000468267 MAP1LC3AQ9H492 121 aa10.79□□□□□ -0.68
SSBP1-207ENST00000468267 LINC00474Q9P2X8 69 aa10.79□□□□□ -0.68
SSBP1-207ENST00000468267 APOMO95445 188 aa10.78□□□□□ -0.68
SSBP1-207ENST00000468267 STPG4Q8N801 248 aa10.78□□□□□ -0.68
SSBP1-207ENST00000468267 PYGO1Q9Y3Y4 419 aa10.78□□□□□ -0.68
SSBP1-207ENST00000468267 Q6ZRU5 148 aa10.77□□□□□ -0.69
SSBP1-207ENST00000468267 Q8N8P6 123 aa10.77□□□□□ -0.69
SSBP1-207ENST00000468267 C2orf48Q96LS8 159 aa10.77□□□□□ -0.69
SSBP1-207ENST00000468267 IGHV3OR16-9A0A0B4J2B5 98 aa10.76□□□□□ -0.69
SSBP1-207ENST00000468267 IFITM10A6NMD0 228 aa10.76□□□□□ -0.69
SSBP1-207ENST00000468267 IFI27P40305 119 aaPredicted RBP10.76□□□□□ -0.69
SSBP1-207ENST00000468267 C7orf33Q8WU49 177 aa10.76□□□□□ -0.69
SSBP1-207ENST00000468267 CTDSP1Q9GZU7 261 aa10.76□□□□□ -0.69
SSBP1-207ENST00000468267 OR10D4PQ8NGN7 298 aa10.75□□□□□ -0.69
SSBP1-207ENST00000468267 CAMK2N2Q96S95 79 aa10.75□□□□□ -0.69
SSBP1-207ENST00000468267 IGLV4-3A0A075B6K6 122 aa10.74□□□□□ -0.69
SSBP1-207ENST00000468267 LOC107984640A0A0U1RRK4 108 aa10.74□□□□□ -0.69
SSBP1-207ENST00000468267 SEC11CQ9BY50 192 aa10.74□□□□□ -0.69
SSBP1-207ENST00000468267 TRAV9-1A0A075B6T8 112 aa10.73□□□□□ -0.69
SSBP1-207ENST00000468267 PTTG1IPP53801 180 aa10.73□□□□□ -0.69
SSBP1-207ENST00000468267 SPAG11BQ08648 103 aa10.73□□□□□ -0.69
SSBP1-207ENST00000468267 TMEM141Q96I45 108 aa10.73□□□□□ -0.69
SSBP1-207ENST00000468267 K7EMI3 77 aa10.72□□□□□ -0.69
SSBP1-207ENST00000468267 ORMDL2Q53FV1 153 aa10.72□□□□□ -0.69
SSBP1-207ENST00000468267 ORAOV1Q8WV07 137 aa10.72□□□□□ -0.69
SSBP1-207ENST00000468267 CYSLTR1Q9Y271 337 aa10.72□□□□□ -0.69
SSBP1-207ENST00000468267 F8WDY8 70 aa10.71□□□□□ -0.69
SSBP1-207ENST00000468267 GAGE2BQ13066 116 aa10.71□□□□□ -0.69
SSBP1-207ENST00000468267 RNF151Q2KHN1 245 aa10.71□□□□□ -0.69
SSBP1-207ENST00000468267 C2orf66Q6UXQ4 117 aa10.71□□□□□ -0.69
SSBP1-207ENST00000468267 COMMD7Q86VX2 200 aa10.71□□□□□ -0.69
SSBP1-207ENST00000468267 NXT2Q9NPJ8 142 aaKnown RBP10.71□□□□□ -0.69
SSBP1-207ENST00000468267 TGIF2-C20orf24A0A0A6YYL0 155 aa10.7□□□□□ -0.7
SSBP1-207ENST00000468267 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.7□□□□□ -0.7
SSBP1-207ENST00000468267 LINC00242Q5T6M2 205 aa10.7□□□□□ -0.7
SSBP1-207ENST00000468267 A0A087WZ39 114 aa10.69□□□□□ -0.7
SSBP1-207ENST00000468267 NPSP0C0P6 89 aa10.69□□□□□ -0.7
SSBP1-207ENST00000468267 KIAA1644Q3SXP7 199 aa10.69□□□□□ -0.7
SSBP1-207ENST00000468267 TEX43Q6ZNM6 134 aa10.69□□□□□ -0.7
SSBP1-207ENST00000468267 A0A0J9YXV3 536 aa10.68□□□□□ -0.7
SSBP1-207ENST00000468267 IGIPA6NJ69 53 aa10.68□□□□□ -0.7
SSBP1-207ENST00000468267 S100PP25815 95 aa10.68□□□□□ -0.7
SSBP1-207ENST00000468267 UBE2D1P51668 147 aa10.68□□□□□ -0.7
SSBP1-207ENST00000468267 PRR3P79522 188 aaKnown RBP10.68□□□□□ -0.7
SSBP1-207ENST00000468267 C10orf91Q5T1B1 145 aa10.68□□□□□ -0.7
SSBP1-207ENST00000468267 AMELXQ99217 191 aa10.68□□□□□ -0.7
SSBP1-207ENST00000468267 VCX2Q9H322 139 aa10.68□□□□□ -0.7
SSBP1-207ENST00000468267 MRPL35Q9NZE8 188 aaKnown RBP10.68□□□□□ -0.7
SSBP1-207ENST00000468267 NDUFA1O15239 70 aa10.67□□□□□ -0.7
SSBP1-207ENST00000468267 ZC2HC1BQ5TFG8 222 aa10.67□□□□□ -0.7
SSBP1-207ENST00000468267 Q6ZN92 141 aa10.67□□□□□ -0.7
SSBP1-207ENST00000468267 LINC00173Q6ZV60 143 aa10.67□□□□□ -0.7
SSBP1-207ENST00000468267 C2orf88Q9BSF0 95 aa10.67□□□□□ -0.7
SSBP1-207ENST00000468267 GNB1LQ9BYB4 327 aa10.67□□□□□ -0.7
SSBP1-207ENST00000468267 G0S2P27469 103 aa10.66□□□□□ -0.7
SSBP1-207ENST00000468267 RPL18AQ02543 176 aaKnown RBP10.66□□□□□ -0.7
SSBP1-207ENST00000468267 C10orf25Q5T742 122 aa10.66□□□□□ -0.7
SSBP1-207ENST00000468267 A0A1W2PNN7 141 aa10.65□□□□□ -0.7
SSBP1-207ENST00000468267 KIAA0087Q14695 138 aa10.65□□□□□ -0.7
SSBP1-207ENST00000468267 UNQ6190/PRO20217Q6UXQ8 127 aa10.65□□□□□ -0.7
SSBP1-207ENST00000468267 LINC01561Q8N1V8 128 aa10.65□□□□□ -0.7
SSBP1-207ENST00000468267 TNXBP22105 4242 aa10.65□□□□□ -0.71
SSBP1-207ENST00000468267 TOMM6Q96B49 74 aa10.64□□□□□ -0.71
SSBP1-207ENST00000468267 CARHSP1Q9Y2V2 147 aaKnown RBP10.64□□□□□ -0.71
SSBP1-207ENST00000468267 RHEBQ15382 184 aa10.63□□□□□ -0.71
SSBP1-207ENST00000468267 COX19Q49B96 90 aa10.63□□□□□ -0.71
SSBP1-207ENST00000468267 C9orf116Q5BN46 136 aaPredicted RBP10.63□□□□□ -0.71
SSBP1-207ENST00000468267 FAM19A3Q7Z5A8 133 aa10.63□□□□□ -0.71
SSBP1-207ENST00000468267 ALKBH7Q9BT30 221 aaPredicted RBP10.63□□□□□ -0.71
SSBP1-207ENST00000468267 C6orf48Q9UBA6 75 aa10.63□□□□□ -0.71
SSBP1-207ENST00000468267 TLX1NBP0CAT3 122 aa10.62□□□□□ -0.71
SSBP1-207ENST00000468267 PAPPA-AS1Q5QFB9 102 aa10.62□□□□□ -0.71
SSBP1-207ENST00000468267 Q6ZRP5 223 aa10.62□□□□□ -0.71
SSBP1-207ENST00000468267 TIMM17AQ99595 171 aa10.62□□□□□ -0.71
SSBP1-207ENST00000468267 LINC01546A6NGU7 62 aa10.61□□□□□ -0.71
SSBP1-207ENST00000468267 MT1HL1P0DM35 61 aa10.61□□□□□ -0.71
SSBP1-207ENST00000468267 SERTAD4-AS1Q5TG53 156 aa10.61□□□□□ -0.71
SSBP1-207ENST00000468267 RPS10P5Q9NQ39 176 aa10.61□□□□□ -0.71
SSBP1-207ENST00000468267 HMCN2Q8NDA2 5059 aa10.61□□□□□ -0.71
SSBP1-207ENST00000468267 MT-ND6P03923 174 aa10.6□□□□□ -0.71
SSBP1-207ENST00000468267 ERASQ7Z444 233 aa10.6□□□□□ -0.71
SSBP1-207ENST00000468267 TRBV30A0A0K0K1B3 111 aa10.59□□□□□ -0.71
SSBP1-207ENST00000468267 FABP9Q0Z7S8 132 aa10.59□□□□□ -0.71
SSBP1-207ENST00000468267 C2orf82Q6UX34 121 aa10.59□□□□□ -0.71
SSBP1-207ENST00000468267 SCGB3A1Q96QR1 104 aa10.59□□□□□ -0.71
SSBP1-207ENST00000468267 MRPL18Q9H0U6 180 aaKnown RBP10.59□□□□□ -0.71
SSBP1-207ENST00000468267 HERVK_113P63121 156 aa10.58□□□□□ -0.72
SSBP1-207ENST00000468267 SEC11AP67812 179 aa10.58□□□□□ -0.72
SSBP1-207ENST00000468267 SRSF9Q13242 221 aaKnown RBP eCLIP10.58□□□□□ -0.72
SSBP1-207ENST00000468267 LINC01549A6NIU2 74 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms