RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 SMAGPQ0VAQ4 97 aa7.85□□□□□ -1.15
CPSF4-208ENST00000452047 RNASE13Q5GAN3 156 aaKnown RBP7.85□□□□□ -1.15
CPSF4-208ENST00000452047 MRPL54Q6P161 138 aaKnown RBP7.85□□□□□ -1.15
CPSF4-208ENST00000452047 Q6ZUT4 128 aa7.85□□□□□ -1.15
CPSF4-208ENST00000452047 CARD19Q96LW7 228 aa7.85□□□□□ -1.15
CPSF4-208ENST00000452047 IMMP2LQ96T52 175 aa7.85□□□□□ -1.15
CPSF4-208ENST00000452047 TIMM21Q9BVV7 248 aa7.85□□□□□ -1.15
CPSF4-208ENST00000452047 TGIF2-C20orf24A0A0A6YYL0 155 aa7.84□□□□□ -1.15
CPSF4-208ENST00000452047 D6R8Y8 96 aa7.84□□□□□ -1.15
CPSF4-208ENST00000452047 S100A2P29034 98 aa7.84□□□□□ -1.15
CPSF4-208ENST00000452047 Q6ZRU5 148 aa7.84□□□□□ -1.15
CPSF4-208ENST00000452047 STPG4Q8N801 248 aa7.84□□□□□ -1.15
CPSF4-208ENST00000452047 FAM104AQ969W3 186 aa7.84□□□□□ -1.15
CPSF4-208ENST00000452047 SMIM2Q9BVW6 85 aa7.84□□□□□ -1.15
CPSF4-208ENST00000452047 TRAV13-1A0A0B4J241 112 aa7.83□□□□□ -1.16
CPSF4-208ENST00000452047 PCP4L1A6NKN8 68 aa7.83□□□□□ -1.16
CPSF4-208ENST00000452047 COX7A2LO14548 114 aa7.83□□□□□ -1.16
CPSF4-208ENST00000452047 NPYP01303 97 aa7.83□□□□□ -1.16
CPSF4-208ENST00000452047 MT1HL1P0DM35 61 aa7.83□□□□□ -1.16
CPSF4-208ENST00000452047 RPL39P62891 51 aaKnown RBP7.83□□□□□ -1.16
CPSF4-208ENST00000452047 SERTAD4-AS1Q5TG53 156 aa7.83□□□□□ -1.16
CPSF4-208ENST00000452047 C7orf33Q8WU49 177 aa7.83□□□□□ -1.16
CPSF4-208ENST00000452047 ZNF561-AS1K7EIQ3 104 aa7.82□□□□□ -1.16
CPSF4-208ENST00000452047 TCAPO15273 167 aa7.82□□□□□ -1.16
CPSF4-208ENST00000452047 HIST1H2BKO60814 126 aa7.82□□□□□ -1.16
CPSF4-208ENST00000452047 HIST1H2BJP06899 126 aa7.82□□□□□ -1.16
CPSF4-208ENST00000452047 HIST1H2BOP23527 126 aa7.82□□□□□ -1.16
CPSF4-208ENST00000452047 HIST1H2BBP33778 126 aa7.82□□□□□ -1.16
CPSF4-208ENST00000452047 NDUFA6P56556 154 aa7.82□□□□□ -1.16
CPSF4-208ENST00000452047 HIST1H2BDP58876 126 aa7.82□□□□□ -1.16
CPSF4-208ENST00000452047 HIST1H2BCP62807 126 aa7.82□□□□□ -1.16
CPSF4-208ENST00000452047 SYCNQ0VAF6 134 aa7.82□□□□□ -1.16
CPSF4-208ENST00000452047 HIST2H2BEQ16778 126 aa7.82□□□□□ -1.16
CPSF4-208ENST00000452047 COA6Q5JTJ3 125 aaKnown RBP7.82□□□□□ -1.16
CPSF4-208ENST00000452047 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.82□□□□□ -1.16
CPSF4-208ENST00000452047 HIST1H2BHQ93079 126 aa7.82□□□□□ -1.16
CPSF4-208ENST00000452047 TMEM18Q96B42 140 aa7.82□□□□□ -1.16
CPSF4-208ENST00000452047 HIST1H2BNQ99877 126 aa7.82□□□□□ -1.16
CPSF4-208ENST00000452047 HIST1H2BMQ99879 126 aa7.82□□□□□ -1.16
CPSF4-208ENST00000452047 LINC00474Q9P2X8 69 aa7.82□□□□□ -1.16
CPSF4-208ENST00000452047 PKIGQ9Y2B9 76 aa7.82□□□□□ -1.16
CPSF4-208ENST00000452047 IGLV4-69A0A075B6H9 119 aa7.81□□□□□ -1.16
CPSF4-208ENST00000452047 TRAV9-1A0A075B6T8 112 aa7.81□□□□□ -1.16
CPSF4-208ENST00000452047 PPBPP02775 128 aa7.81□□□□□ -1.16
CPSF4-208ENST00000452047 TRGC2P03986 189 aa7.81□□□□□ -1.16
CPSF4-208ENST00000452047 MALP21145 153 aa7.81□□□□□ -1.16
CPSF4-208ENST00000452047 PRR3P79522 188 aaKnown RBP7.81□□□□□ -1.16
CPSF4-208ENST00000452047 ATP5L2Q7Z4Y8 100 aa7.81□□□□□ -1.16
CPSF4-208ENST00000452047 HIST3H2BBQ8N257 126 aa7.8□□□□□ -1.16
CPSF4-208ENST00000452047 SPANXA1Q9NS26 97 aa7.8□□□□□ -1.16
CPSF4-208ENST00000452047 PTTG1IPP53801 180 aa7.79□□□□□ -1.16
CPSF4-208ENST00000452047 MRPS36P82909 103 aaKnown RBP7.79□□□□□ -1.16
CPSF4-208ENST00000452047 C5orf38Q86SI9 138 aa7.79□□□□□ -1.16
CPSF4-208ENST00000452047 ORMDL3Q8N138 153 aa7.79□□□□□ -1.16
CPSF4-208ENST00000452047 OPRPNQ99935 248 aaPredicted RBP7.79□□□□□ -1.16
CPSF4-208ENST00000452047 TNXBP22105 4242 aa7.79□□□□□ -1.16
CPSF4-208ENST00000452047 IGHV3OR16-9A0A0B4J2B5 98 aa7.78□□□□□ -1.16
CPSF4-208ENST00000452047 LOC107984640A0A0U1RRK4 108 aa7.78□□□□□ -1.16
CPSF4-208ENST00000452047 IFITM10A6NMD0 228 aa7.78□□□□□ -1.16
CPSF4-208ENST00000452047 TMEM136Q6ZRR5 245 aa7.78□□□□□ -1.16
CPSF4-208ENST00000452047 C2orf48Q96LS8 159 aa7.78□□□□□ -1.16
CPSF4-208ENST00000452047 CAMK2N2Q96S95 79 aa7.78□□□□□ -1.16
CPSF4-208ENST00000452047 APOMO95445 188 aa7.77□□□□□ -1.17
CPSF4-208ENST00000452047 SPAG11BQ08648 103 aa7.77□□□□□ -1.17
CPSF4-208ENST00000452047 PRELID3AQ96N28 172 aa7.77□□□□□ -1.17
CPSF4-208ENST00000452047 PRSS47A8MTI9 375 aa7.76□□□□□ -1.17
CPSF4-208ENST00000452047 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.76□□□□□ -1.17
CPSF4-208ENST00000452047 GAGE2BQ13066 116 aa7.76□□□□□ -1.17
CPSF4-208ENST00000452047 OR10D4PQ8NGN7 298 aa7.76□□□□□ -1.17
CPSF4-208ENST00000452047 PYY3Q5JQD4 70 aa7.75□□□□□ -1.17
CPSF4-208ENST00000452047 PLA2G2DQ9UNK4 145 aa7.75□□□□□ -1.17
CPSF4-208ENST00000452047 LAMTOR2Q9Y2Q5 125 aa7.75□□□□□ -1.17
CPSF4-208ENST00000452047 PYGO1Q9Y3Y4 419 aa7.75□□□□□ -1.17
CPSF4-208ENST00000452047 IGLV4-3A0A075B6K6 122 aa7.74□□□□□ -1.17
CPSF4-208ENST00000452047 A0A1W2PNN7 141 aa7.74□□□□□ -1.17
CPSF4-208ENST00000452047 IFI27P40305 119 aaPredicted RBP7.74□□□□□ -1.17
CPSF4-208ENST00000452047 RNF151Q2KHN1 245 aa7.74□□□□□ -1.17
CPSF4-208ENST00000452047 COX19Q49B96 90 aa7.74□□□□□ -1.17
CPSF4-208ENST00000452047 ORAOV1Q8WV07 137 aa7.74□□□□□ -1.17
CPSF4-208ENST00000452047 PACRGQ96M98 296 aaPredicted RBP7.74□□□□□ -1.17
CPSF4-208ENST00000452047 MRPL35Q9NZE8 188 aaKnown RBP7.74□□□□□ -1.17
CPSF4-208ENST00000452047 A0A0J9YXV3 536 aa7.73□□□□□ -1.17
CPSF4-208ENST00000452047 LINC00587B1AMM8 73 aa7.73□□□□□ -1.17
CPSF4-208ENST00000452047 Q6ZRP5 223 aa7.73□□□□□ -1.17
CPSF4-208ENST00000452047 HIST1H2BLQ99880 126 aa7.73□□□□□ -1.17
CPSF4-208ENST00000452047 LOC389332A0A1B0GUA5 103 aa7.72□□□□□ -1.17
CPSF4-208ENST00000452047 F8WDY8 70 aa7.72□□□□□ -1.17
CPSF4-208ENST00000452047 RPL18AQ02543 176 aaKnown RBP7.72□□□□□ -1.17
CPSF4-208ENST00000452047 SRSF9Q13242 221 aaKnown RBP eCLIP7.72□□□□□ -1.17
CPSF4-208ENST00000452047 JOSD1Q15040 202 aaPredicted RBP7.72□□□□□ -1.17
CPSF4-208ENST00000452047 C9orf116Q5BN46 136 aaPredicted RBP7.72□□□□□ -1.17
CPSF4-208ENST00000452047 LINC00242Q5T6M2 205 aa7.72□□□□□ -1.17
CPSF4-208ENST00000452047 LINC01600Q96MT4 127 aa7.72□□□□□ -1.17
CPSF4-208ENST00000452047 MAP1LC3AQ9H492 121 aa7.72□□□□□ -1.17
CPSF4-208ENST00000452047 A0A087WZ39 114 aa7.71□□□□□ -1.18
CPSF4-208ENST00000452047 NDUFA1O15239 70 aa7.71□□□□□ -1.18
CPSF4-208ENST00000452047 FABP4P15090 132 aa7.71□□□□□ -1.18
CPSF4-208ENST00000452047 C10orf25Q5T742 122 aa7.71□□□□□ -1.18
CPSF4-208ENST00000452047 SPINK6Q6UWN8 80 aa7.71□□□□□ -1.18
CPSF4-208ENST00000452047 Q8N8P6 123 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms