RNA–Protein interactions for RNA: ENST00000415600.6

PTPRU-203, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 1,590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-203ENST00000415600 COX11Q9Y6N1 276 aa13.69□□□□□ -0.22
PTPRU-203ENST00000415600 PLNP26678 52 aa13.68□□□□□ -0.22
PTPRU-203ENST00000415600 PMVKQ15126 192 aa13.68□□□□□ -0.22
PTPRU-203ENST00000415600 DAZ4Q86SG3 579 aaKnown RBP13.68□□□□□ -0.22
PTPRU-203ENST00000415600 RMI2Q96E14 147 aa13.68□□□□□ -0.22
PTPRU-203ENST00000415600 DAZ3Q9NR90 486 aaKnown RBP13.68□□□□□ -0.22
PTPRU-203ENST00000415600 PYGO1Q9Y3Y4 419 aa13.68□□□□□ -0.22
PTPRU-203ENST00000415600 KRTAP10-1P60331 282 aa13.67□□□□□ -0.22
PTPRU-203ENST00000415600 ANKRD39Q53RE8 183 aa13.67□□□□□ -0.22
PTPRU-203ENST00000415600 Q8N814 137 aa13.67□□□□□ -0.22
PTPRU-203ENST00000415600 LRCOL1A6NCL2 159 aa13.66□□□□□ -0.22
PTPRU-203ENST00000415600 STPG4Q8N801 248 aa13.66□□□□□ -0.22
PTPRU-203ENST00000415600 NPSP0C0P6 89 aa13.66□□□□□ -0.22
PTPRU-203ENST00000415600 XGP55808 180 aa13.65□□□□□ -0.22
PTPRU-203ENST00000415600 CST9LQ9H4G1 147 aa13.65□□□□□ -0.22
PTPRU-203ENST00000415600 IGLV4-3A0A075B6K6 122 aa13.63□□□□□ -0.23
PTPRU-203ENST00000415600 COX8AP10176 69 aa13.63□□□□□ -0.23
PTPRU-203ENST00000415600 HNRNPA3P51991 378 aaKnown RBP13.63□□□□□ -0.23
PTPRU-203ENST00000415600 PAPPA-AS1Q5QFB9 102 aa13.63□□□□□ -0.23
PTPRU-203ENST00000415600 ZC2HC1BQ5TFG8 222 aa13.63□□□□□ -0.23
PTPRU-203ENST00000415600 SLC25A34Q6PIV7 304 aa13.63□□□□□ -0.23
PTPRU-203ENST00000415600 SPANXA1Q9NS26 97 aa13.63□□□□□ -0.23
PTPRU-203ENST00000415600 MRPL52Q86TS9 123 aaKnown RBP13.62□□□□□ -0.23
PTPRU-203ENST00000415600 UBE2D4Q9Y2X8 147 aa13.62□□□□□ -0.23
PTPRU-203ENST00000415600 OPRPNQ99935 248 aaPredicted RBP13.62□□□□□ -0.23
PTPRU-203ENST00000415600 IGLV4-69A0A075B6H9 119 aa13.61□□□□□ -0.23
PTPRU-203ENST00000415600 NTM-AS1Q6ZSK4 140 aa13.61□□□□□ -0.23
PTPRU-203ENST00000415600 TIMM21Q9BVV7 248 aa13.61□□□□□ -0.23
PTPRU-203ENST00000415600 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.6□□□□□ -0.23
PTPRU-203ENST00000415600 IGKV2-29A2NJV5 120 aaPredicted RBP13.6□□□□□ -0.23
PTPRU-203ENST00000415600 FAM229AH3BQW9 127 aa13.6□□□□□ -0.23
PTPRU-203ENST00000415600 FAM104AQ969W3 186 aa13.6□□□□□ -0.23
PTPRU-203ENST00000415600 Q5VSD8 79 aa13.59□□□□□ -0.23
PTPRU-203ENST00000415600 AMELXQ99217 191 aa13.59□□□□□ -0.23
PTPRU-203ENST00000415600 INAFM2P0DMQ5 153 aa13.58□□□□□ -0.23
PTPRU-203ENST00000415600 FGF6P10767 208 aa13.58□□□□□ -0.23
PTPRU-203ENST00000415600 CTAG1AP78358 180 aa13.58□□□□□ -0.23
PTPRU-203ENST00000415600 VCX2Q9H322 139 aa13.58□□□□□ -0.23
PTPRU-203ENST00000415600 BOD1L2Q8IYS8 172 aa13.58□□□□□ -0.24
PTPRU-203ENST00000415600 Q8N3U1 123 aa13.58□□□□□ -0.24
PTPRU-203ENST00000415600 C11orf86A6NJI1 115 aa13.57□□□□□ -0.24
PTPRU-203ENST00000415600 DLEU1O43261 78 aa13.57□□□□□ -0.24
PTPRU-203ENST00000415600 NMUP48645 174 aa13.57□□□□□ -0.24
PTPRU-203ENST00000415600 MRPS36P82909 103 aaKnown RBP13.57□□□□□ -0.24
PTPRU-203ENST00000415600 TP73-AS1Q9UF72 201 aa13.57□□□□□ -0.24
PTPRU-203ENST00000415600 IGKV2D-26A0A0A0MRZ7 120 aa13.56□□□□□ -0.24
PTPRU-203ENST00000415600 TMEM97Q5BJF2 176 aa13.56□□□□□ -0.24
PTPRU-203ENST00000415600 KLK12Q9UKR0 248 aa13.56□□□□□ -0.24
PTPRU-203ENST00000415600 IGKV2D-24A0A075B6R9 120 aa13.55□□□□□ -0.24
PTPRU-203ENST00000415600 TMEM262E9PQX1 116 aa13.55□□□□□ -0.24
PTPRU-203ENST00000415600 M0R143 59 aa13.55□□□□□ -0.24
PTPRU-203ENST00000415600 SMAGPQ0VAQ4 97 aa13.55□□□□□ -0.24
PTPRU-203ENST00000415600 SNHG12Q9BXW3 62 aa13.55□□□□□ -0.24
PTPRU-203ENST00000415600 CSDC2Q9Y534 153 aaKnown RBP13.55□□□□□ -0.24
PTPRU-203ENST00000415600 UBE2WQ96B02 151 aa13.54□□□□□ -0.24
PTPRU-203ENST00000415600 TMEM243Q9BU79 118 aa13.54□□□□□ -0.24
PTPRU-203ENST00000415600 TRBV25-1A0A075B6N4 114 aa13.54□□□□□ -0.24
PTPRU-203ENST00000415600 TRBV6-8A0A0A6YYG3 113 aa13.54□□□□□ -0.24
PTPRU-203ENST00000415600 H7C423 109 aa13.54□□□□□ -0.24
PTPRU-203ENST00000415600 Q6ZUT4 128 aa13.54□□□□□ -0.24
PTPRU-203ENST00000415600 PCP2Q8IVA1 136 aa13.54□□□□□ -0.24
PTPRU-203ENST00000415600 CRPP02741 224 aa13.53□□□□□ -0.24
PTPRU-203ENST00000415600 SMR3BP02814 79 aaPredicted RBP13.53□□□□□ -0.24
PTPRU-203ENST00000415600 LBHQ53QV2 105 aaPredicted RBP13.53□□□□□ -0.24
PTPRU-203ENST00000415600 CHAC1Q9BUX1 264 aa13.53□□□□□ -0.24
PTPRU-203ENST00000415600 E9PLD3 99 aa13.52□□□□□ -0.25
PTPRU-203ENST00000415600 LECT2O14960 151 aa13.52□□□□□ -0.25
PTPRU-203ENST00000415600 DGAT2L7PQ6IED9 249 aa13.52□□□□□ -0.25
PTPRU-203ENST00000415600 C2orf91Q6ZV80 131 aa13.52□□□□□ -0.25
PTPRU-203ENST00000415600 C14orf177Q52M58 125 aa13.51□□□□□ -0.25
PTPRU-203ENST00000415600 C2orf88Q9BSF0 95 aa13.51□□□□□ -0.25
PTPRU-203ENST00000415600 C1orf43Q9BWL3 253 aa13.51□□□□□ -0.25
PTPRU-203ENST00000415600 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.5□□□□□ -0.25
PTPRU-203ENST00000415600 UBE2L6O14933 153 aa13.5□□□□□ -0.25
PTPRU-203ENST00000415600 HERVK_113P61574 105 aa13.5□□□□□ -0.25
PTPRU-203ENST00000415600 A0A0J9YXV3 536 aa13.49□□□□□ -0.25
PTPRU-203ENST00000415600 RNASE13Q5GAN3 156 aaKnown RBP13.49□□□□□ -0.25
PTPRU-203ENST00000415600 CHCHD5Q9BSY4 110 aa13.49□□□□□ -0.25
PTPRU-203ENST00000415600 WFDC2Q14508 124 aa13.49□□□□□ -0.25
PTPRU-203ENST00000415600 TMEM170BQ5T4T1 132 aa13.49□□□□□ -0.25
PTPRU-203ENST00000415600 ZNF22P17026 224 aaPredicted RBP13.48□□□□□ -0.25
PTPRU-203ENST00000415600 ZNF25P17030 456 aaPredicted RBP13.48□□□□□ -0.25
PTPRU-203ENST00000415600 DMBT1Q9UGM3 2413 aaPredicted RBP13.48□□□□□ -0.25
PTPRU-203ENST00000415600 TINCRA0A1B0GVN0 87 aa13.47□□□□□ -0.25
PTPRU-203ENST00000415600 UBE2D1P51668 147 aa13.47□□□□□ -0.25
PTPRU-203ENST00000415600 HAMPP81172 84 aa13.47□□□□□ -0.25
PTPRU-203ENST00000415600 AMMECR1LQ6DCA0 310 aa13.47□□□□□ -0.25
PTPRU-203ENST00000415600 OR5A1Q8NGJ0 315 aa13.47□□□□□ -0.25
PTPRU-203ENST00000415600 TTTY13Q9BZ97 58 aa13.47□□□□□ -0.25
PTPRU-203ENST00000415600 ANGP03950 147 aaKnown RBP13.46□□□□□ -0.25
PTPRU-203ENST00000415600 CDC42SE2Q9NRR3 84 aa13.46□□□□□ -0.25
PTPRU-203ENST00000415600 TMEM223A0PJW6 202 aa13.45□□□□□ -0.26
PTPRU-203ENST00000415600 PLA2G1BP04054 148 aaKnown RBP13.45□□□□□ -0.26
PTPRU-203ENST00000415600 TMEM101Q96IK0 257 aa13.45□□□□□ -0.26
PTPRU-203ENST00000415600 HIGD1BQ9P298 99 aa13.45□□□□□ -0.26
PTPRU-203ENST00000415600 MIAQ16674 131 aa13.45□□□□□ -0.26
PTPRU-203ENST00000415600 FAM19A3Q7Z5A8 133 aa13.45□□□□□ -0.26
PTPRU-203ENST00000415600 HINT1P49773 126 aaPredicted RBP13.44□□□□□ -0.26
PTPRU-203ENST00000415600 GAGE6Q13070 117 aa13.44□□□□□ -0.26
PTPRU-203ENST00000415600 MPV17L2Q567V2 206 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms