RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 FAM104AQ969W3 186 aa3.67□□□□□ -1.82
HMGB1P20-201ENST00000402555 DPH3Q96FX2 82 aa3.67□□□□□ -1.82
HMGB1P20-201ENST00000402555 OPRPNQ99935 248 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P20-201ENST00000402555 C20orf78Q9BR46 151 aa3.67□□□□□ -1.82
HMGB1P20-201ENST00000402555 FAT3Q8TDW7 4589 aa3.66□□□□□ -1.82
HMGB1P20-201ENST00000402555 A0A087WYN8 130 aa3.66□□□□□ -1.82
HMGB1P20-201ENST00000402555 IGHV1-58A0A0C4DH39 117 aa3.66□□□□□ -1.82
HMGB1P20-201ENST00000402555 IGKV2-24A0A0C4DH68 120 aa3.66□□□□□ -1.82
HMGB1P20-201ENST00000402555 LOC389332A0A1B0GUA5 103 aa3.66□□□□□ -1.82
HMGB1P20-201ENST00000402555 MT-ND4LP03901 98 aa3.66□□□□□ -1.82
HMGB1P20-201ENST00000402555 ADCYAP1P18509 176 aa3.66□□□□□ -1.82
HMGB1P20-201ENST00000402555 HNRNPA3P51991 378 aaKnown RBP3.66□□□□□ -1.82
HMGB1P20-201ENST00000402555 RPL32P62910 135 aaKnown RBP3.66□□□□□ -1.82
HMGB1P20-201ENST00000402555 PNRC1Q12796 327 aaPredicted RBP3.66□□□□□ -1.82
HMGB1P20-201ENST00000402555 CIRBPQ14011 172 aaKnown RBP3.66□□□□□ -1.82
HMGB1P20-201ENST00000402555 CD164L2Q6UWJ8 174 aa3.66□□□□□ -1.82
HMGB1P20-201ENST00000402555 ATP5L2Q7Z4Y8 100 aa3.66□□□□□ -1.82
HMGB1P20-201ENST00000402555 C5orf38Q86SI9 138 aa3.66□□□□□ -1.82
HMGB1P20-201ENST00000402555 ORMDL3Q8N138 153 aa3.66□□□□□ -1.82
HMGB1P20-201ENST00000402555 SPACA4Q8TDM5 124 aa3.66□□□□□ -1.82
HMGB1P20-201ENST00000402555 PRELID3AQ96N28 172 aa3.66□□□□□ -1.82
HMGB1P20-201ENST00000402555 A0A096LNI7 61 aa3.65□□□□□ -1.83
HMGB1P20-201ENST00000402555 C1orf196B1AJZ1 125 aa3.65□□□□□ -1.83
HMGB1P20-201ENST00000402555 COX7A2LO14548 114 aa3.65□□□□□ -1.83
HMGB1P20-201ENST00000402555 PHOX2AO14813 284 aa3.65□□□□□ -1.83
HMGB1P20-201ENST00000402555 PPBPP02775 128 aa3.65□□□□□ -1.83
HMGB1P20-201ENST00000402555 MALP21145 153 aa3.65□□□□□ -1.83
HMGB1P20-201ENST00000402555 MAJINQ3KP22 176 aa3.65□□□□□ -1.83
HMGB1P20-201ENST00000402555 TMEM18Q96B42 140 aa3.65□□□□□ -1.83
HMGB1P20-201ENST00000402555 CARD19Q96LW7 228 aa3.65□□□□□ -1.83
HMGB1P20-201ENST00000402555 TIMM21Q9BVV7 248 aa3.65□□□□□ -1.83
HMGB1P20-201ENST00000402555 CSDC2Q9Y534 153 aaKnown RBP3.65□□□□□ -1.83
HMGB1P20-201ENST00000402555 IGLV4-69A0A075B6H9 119 aa3.64□□□□□ -1.83
HMGB1P20-201ENST00000402555 TMEM218A2RU14 115 aa3.64□□□□□ -1.83
HMGB1P20-201ENST00000402555 IFITM10A6NMD0 228 aa3.64□□□□□ -1.83
HMGB1P20-201ENST00000402555 RAB5AP20339 215 aa3.64□□□□□ -1.83
HMGB1P20-201ENST00000402555 SYCNQ0VAF6 134 aa3.64□□□□□ -1.83
HMGB1P20-201ENST00000402555 SMAGPQ0VAQ4 97 aa3.64□□□□□ -1.83
HMGB1P20-201ENST00000402555 Q6ZRU5 148 aa3.64□□□□□ -1.83
HMGB1P20-201ENST00000402555 SPANXA1Q9NS26 97 aa3.64□□□□□ -1.83
HMGB1P20-201ENST00000402555 PLAC8Q9NZF1 115 aa3.64□□□□□ -1.83
HMGB1P20-201ENST00000402555 IGLV4-3A0A075B6K6 122 aa3.63□□□□□ -1.83
HMGB1P20-201ENST00000402555 A0A0J9YXV3 536 aa3.63□□□□□ -1.83
HMGB1P20-201ENST00000402555 KRTAP29-1A8MX34 341 aaPredicted RBP3.63□□□□□ -1.83
HMGB1P20-201ENST00000402555 MRPS36P82909 103 aaKnown RBP3.63□□□□□ -1.83
HMGB1P20-201ENST00000402555 KIAA1644Q3SXP7 199 aa3.63□□□□□ -1.83
HMGB1P20-201ENST00000402555 ZC2HC1BQ5TFG8 222 aa3.63□□□□□ -1.83
HMGB1P20-201ENST00000402555 UQCC3Q6UW78 93 aa3.63□□□□□ -1.83
HMGB1P20-201ENST00000402555 COMMD7Q86VX2 200 aa3.63□□□□□ -1.83
HMGB1P20-201ENST00000402555 STPG4Q8N801 248 aa3.63□□□□□ -1.83
HMGB1P20-201ENST00000402555 Q8N8P6 123 aa3.63□□□□□ -1.83
HMGB1P20-201ENST00000402555 MAP1LC3AQ9H492 121 aa3.63□□□□□ -1.83
HMGB1P20-201ENST00000402555 IGHV3OR16-9A0A0B4J2B5 98 aa3.62□□□□□ -1.83
HMGB1P20-201ENST00000402555 PRSS47A8MTI9 375 aa3.62□□□□□ -1.83
HMGB1P20-201ENST00000402555 IFI27P40305 119 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P20-201ENST00000402555 SPAG11BQ08648 103 aa3.62□□□□□ -1.83
HMGB1P20-201ENST00000402555 GAGE2BQ13066 116 aa3.62□□□□□ -1.83
HMGB1P20-201ENST00000402555 ORAOV1Q8WV07 137 aa3.62□□□□□ -1.83
HMGB1P20-201ENST00000402555 CAMK2N2Q96S95 79 aa3.62□□□□□ -1.83
HMGB1P20-201ENST00000402555 IMMP2LQ96T52 175 aa3.62□□□□□ -1.83
HMGB1P20-201ENST00000402555 CTDSP1Q9GZU7 261 aa3.62□□□□□ -1.83
HMGB1P20-201ENST00000402555 LAMTOR2Q9Y2Q5 125 aa3.62□□□□□ -1.83
HMGB1P20-201ENST00000402555 LOC107984640A0A0U1RRK4 108 aa3.61□□□□□ -1.83
HMGB1P20-201ENST00000402555 KRTAP23-1A1A580 65 aa3.61□□□□□ -1.83
HMGB1P20-201ENST00000402555 APOMO95445 188 aa3.61□□□□□ -1.83
HMGB1P20-201ENST00000402555 PTTG1IPP53801 180 aa3.61□□□□□ -1.83
HMGB1P20-201ENST00000402555 RPL18AQ02543 176 aaKnown RBP3.61□□□□□ -1.83
HMGB1P20-201ENST00000402555 LINC00242Q5T6M2 205 aa3.61□□□□□ -1.83
HMGB1P20-201ENST00000402555 C10orf25Q5T742 122 aa3.61□□□□□ -1.83
HMGB1P20-201ENST00000402555 C2orf66Q6UXQ4 117 aa3.61□□□□□ -1.83
HMGB1P20-201ENST00000402555 LINC00173Q6ZV60 143 aa3.61□□□□□ -1.83
HMGB1P20-201ENST00000402555 C7orf33Q8WU49 177 aa3.61□□□□□ -1.83
HMGB1P20-201ENST00000402555 TMEM141Q96I45 108 aa3.61□□□□□ -1.83
HMGB1P20-201ENST00000402555 C2orf48Q96LS8 159 aa3.61□□□□□ -1.83
HMGB1P20-201ENST00000402555 SEC11CQ9BY50 192 aa3.61□□□□□ -1.83
HMGB1P20-201ENST00000402555 CYSLTR1Q9Y271 337 aa3.61□□□□□ -1.83
HMGB1P20-201ENST00000402555 PYGO1Q9Y3Y4 419 aa3.61□□□□□ -1.83
HMGB1P20-201ENST00000402555 TGIF2-C20orf24A0A0A6YYL0 155 aa3.6□□□□□ -1.83
HMGB1P20-201ENST00000402555 A0A1W2PNN7 141 aa3.6□□□□□ -1.83
HMGB1P20-201ENST00000402555 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P20-201ENST00000402555 OXTP01178 125 aa3.6□□□□□ -1.83
HMGB1P20-201ENST00000402555 UBE2D1P51668 147 aa3.6□□□□□ -1.83
HMGB1P20-201ENST00000402555 UNQ6190/PRO20217Q6UXQ8 127 aa3.6□□□□□ -1.83
HMGB1P20-201ENST00000402555 TEX43Q6ZNM6 134 aa3.6□□□□□ -1.83
HMGB1P20-201ENST00000402555 OR10D4PQ8NGN7 298 aa3.6□□□□□ -1.83
HMGB1P20-201ENST00000402555 NXT2Q9NPJ8 142 aaKnown RBP3.6□□□□□ -1.83
HMGB1P20-201ENST00000402555 RPS10P5Q9NQ39 176 aa3.6□□□□□ -1.83
HMGB1P20-201ENST00000402555 TRAV9-1A0A075B6T8 112 aa3.59□□□□□ -1.83
HMGB1P20-201ENST00000402555 A0A087WZ39 114 aa3.59□□□□□ -1.83
HMGB1P20-201ENST00000402555 IGIPA6NJ69 53 aa3.59□□□□□ -1.83
HMGB1P20-201ENST00000402555 NDUFA1O15239 70 aa3.59□□□□□ -1.83
HMGB1P20-201ENST00000402555 S100PP25815 95 aa3.59□□□□□ -1.83
HMGB1P20-201ENST00000402555 PRR3P79522 188 aaKnown RBP3.59□□□□□ -1.83
HMGB1P20-201ENST00000402555 KIAA0087Q14695 138 aa3.59□□□□□ -1.83
HMGB1P20-201ENST00000402555 KRTAP15-1Q3LI76 137 aa3.59□□□□□ -1.83
HMGB1P20-201ENST00000402555 ORMDL2Q53FV1 153 aa3.59□□□□□ -1.83
HMGB1P20-201ENST00000402555 C10orf91Q5T1B1 145 aa3.59□□□□□ -1.83
HMGB1P20-201ENST00000402555 C2orf82Q6UX34 121 aa3.59□□□□□ -1.83
HMGB1P20-201ENST00000402555 Q6ZN92 141 aa3.59□□□□□ -1.83
HMGB1P20-201ENST00000402555 AMELXQ99217 191 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms