RNA–Protein interactions for RNA: ENST00000380853.1

TTC39B-203, Transcript of tetratricopeptide repeat domain 39B, humanhuman

TSL 1 (best)

Gene TTC39B, Length 1,326 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-203ENST00000380853 LINC01551Q86U37 167 aa4.24□□□□□ -1.73
TTC39B-203ENST00000380853 CAMK2N2Q96S95 79 aa4.24□□□□□ -1.73
TTC39B-203ENST00000380853 OSTCQ9NRP0 149 aa4.24□□□□□ -1.73
TTC39B-203ENST00000380853 IGLV4-69A0A075B6H9 119 aa4.23□□□□□ -1.73
TTC39B-203ENST00000380853 TRBV27A0A0K0K1C4 114 aa4.23□□□□□ -1.73
TTC39B-203ENST00000380853 C1orf196B1AJZ1 125 aa4.23□□□□□ -1.73
TTC39B-203ENST00000380853 PPP1R2P9O14990 202 aa4.23□□□□□ -1.73
TTC39B-203ENST00000380853 GAS8-AS1O95177 125 aa4.23□□□□□ -1.73
TTC39B-203ENST00000380853 RAB4AP20338 218 aa4.23□□□□□ -1.73
TTC39B-203ENST00000380853 SUMO2P61956 95 aaKnown RBP4.23□□□□□ -1.73
TTC39B-203ENST00000380853 SPAG11BQ08648 103 aa4.23□□□□□ -1.73
TTC39B-203ENST00000380853 ADIRFQ15847 76 aa4.23□□□□□ -1.73
TTC39B-203ENST00000380853 Q6ZRP5 223 aa4.23□□□□□ -1.73
TTC39B-203ENST00000380853 Q6ZUT4 128 aa4.23□□□□□ -1.73
TTC39B-203ENST00000380853 CDC42SE2Q9NRR3 84 aa4.23□□□□□ -1.73
TTC39B-203ENST00000380853 NAT8BQ9UHF3 227 aa4.23□□□□□ -1.73
TTC39B-203ENST00000380853 MT-ND6P03923 174 aa4.22□□□□□ -1.73
TTC39B-203ENST00000380853 POLR2KP53803 58 aaKnown RBP4.22□□□□□ -1.73
TTC39B-203ENST00000380853 SPINK6Q6UWN8 80 aa4.22□□□□□ -1.73
TTC39B-203ENST00000380853 C5orf38Q86SI9 138 aa4.22□□□□□ -1.73
TTC39B-203ENST00000380853 TCAPO15273 167 aa4.21□□□□□ -1.73
TTC39B-203ENST00000380853 S100A8P05109 93 aa4.21□□□□□ -1.73
TTC39B-203ENST00000380853 SRP19P09132 144 aaKnown RBP4.21□□□□□ -1.73
TTC39B-203ENST00000380853 TMEM241Q24JQ0 296 aa4.21□□□□□ -1.73
TTC39B-203ENST00000380853 NRACQ8N912 160 aa4.21□□□□□ -1.73
TTC39B-203ENST00000380853 NUP35Q8NFH5 326 aa4.21□□□□□ -1.73
TTC39B-203ENST00000380853 ORAOV1Q8WV07 137 aa4.21□□□□□ -1.73
TTC39B-203ENST00000380853 LINC01600Q96MT4 127 aa4.21□□□□□ -1.73
TTC39B-203ENST00000380853 UBE2D4Q9Y2X8 147 aa4.21□□□□□ -1.73
TTC39B-203ENST00000380853 V9GYV3 84 aa4.21□□□□□ -1.73
TTC39B-203ENST00000380853 VPS13BQ7Z7G8 4022 aa4.21□□□□□ -1.74
TTC39B-203ENST00000380853 MYCBP2O75592 4640 aa4.21□□□□□ -1.74
TTC39B-203ENST00000380853 A0A0J9YXV3 536 aa4.21□□□□□ -1.74
TTC39B-203ENST00000380853 A0A1B0GW15 77 aa4.21□□□□□ -1.74
TTC39B-203ENST00000380853 IFITM10A6NMD0 228 aa4.21□□□□□ -1.74
TTC39B-203ENST00000380853 F8W036 122 aa4.21□□□□□ -1.74
TTC39B-203ENST00000380853 CKS2P33552 79 aa4.21□□□□□ -1.74
TTC39B-203ENST00000380853 CTAG1AP78358 180 aa4.21□□□□□ -1.74
TTC39B-203ENST00000380853 MRPL51Q4U2R6 128 aaKnown RBP4.21□□□□□ -1.74
TTC39B-203ENST00000380853 FAM74A3Q4VXF1 159 aa4.21□□□□□ -1.74
TTC39B-203ENST00000380853 FAM104BQ5XKR9 115 aa4.21□□□□□ -1.74
TTC39B-203ENST00000380853 C2orf48Q96LS8 159 aa4.21□□□□□ -1.74
TTC39B-203ENST00000380853 NAT8Q9UHE5 227 aa4.21□□□□□ -1.74
TTC39B-203ENST00000380853 CSDC2Q9Y534 153 aaKnown RBP4.21□□□□□ -1.74
TTC39B-203ENST00000380853 TGIF2-C20orf24A0A0A6YYL0 155 aa4.2□□□□□ -1.74
TTC39B-203ENST00000380853 LINC00862A6NCI5 91 aa4.2□□□□□ -1.74
TTC39B-203ENST00000380853 NDUFA1O15239 70 aa4.2□□□□□ -1.74
TTC39B-203ENST00000380853 RPL23P62829 140 aaKnown RBP4.2□□□□□ -1.74
TTC39B-203ENST00000380853 HBBP68871 147 aa4.2□□□□□ -1.74
TTC39B-203ENST00000380853 C9orf116Q5BN46 136 aaPredicted RBP4.2□□□□□ -1.74
TTC39B-203ENST00000380853 MRPL54Q6P161 138 aaKnown RBP4.2□□□□□ -1.74
TTC39B-203ENST00000380853 OR10D4PQ8NGN7 298 aa4.2□□□□□ -1.74
TTC39B-203ENST00000380853 C20orf78Q9BR46 151 aa4.2□□□□□ -1.74
TTC39B-203ENST00000380853 TIMM21Q9BVV7 248 aa4.2□□□□□ -1.74
TTC39B-203ENST00000380853 SMIM2Q9BVW6 85 aa4.2□□□□□ -1.74
TTC39B-203ENST00000380853 SPANXA1Q9NS26 97 aa4.2□□□□□ -1.74
TTC39B-203ENST00000380853 D6R8Y8 96 aa4.19□□□□□ -1.74
TTC39B-203ENST00000380853 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.19□□□□□ -1.74
TTC39B-203ENST00000380853 IFI27P40305 119 aaPredicted RBP4.19□□□□□ -1.74
TTC39B-203ENST00000380853 RPL39P62891 51 aaKnown RBP4.19□□□□□ -1.74
TTC39B-203ENST00000380853 PEA15Q15121 130 aa4.19□□□□□ -1.74
TTC39B-203ENST00000380853 C1orf137Q5JT78 98 aa4.19□□□□□ -1.74
TTC39B-203ENST00000380853 IMMP2LQ96T52 175 aa4.19□□□□□ -1.74
TTC39B-203ENST00000380853 OPRPNQ99935 248 aaPredicted RBP4.19□□□□□ -1.74
TTC39B-203ENST00000380853 LOC105371267A0A1B0GV96 52 aa4.18□□□□□ -1.74
TTC39B-203ENST00000380853 A0A1W2PNN7 141 aa4.18□□□□□ -1.74
TTC39B-203ENST00000380853 SMIM27A0A1W2PRY6 76 aa4.18□□□□□ -1.74
TTC39B-203ENST00000380853 F8WDY8 70 aa4.18□□□□□ -1.74
TTC39B-203ENST00000380853 NPYP01303 97 aa4.18□□□□□ -1.74
TTC39B-203ENST00000380853 PPBPP02775 128 aa4.18□□□□□ -1.74
TTC39B-203ENST00000380853 RAB5AP20339 215 aa4.18□□□□□ -1.74
TTC39B-203ENST00000380853 RPL32P62910 135 aaKnown RBP4.18□□□□□ -1.74
TTC39B-203ENST00000380853 PHF5AQ7RTV0 110 aaKnown RBP4.18□□□□□ -1.74
TTC39B-203ENST00000380853 FAM19A5Q7Z5A7 132 aaPredicted RBP4.18□□□□□ -1.74
TTC39B-203ENST00000380853 MRPL35Q9NZE8 188 aaKnown RBP4.18□□□□□ -1.74
TTC39B-203ENST00000380853 PSORS1C2Q9UIG4 136 aa4.18□□□□□ -1.74
TTC39B-203ENST00000380853 HERC1Q15751 4861 aa4.18□□□□□ -1.74
TTC39B-203ENST00000380853 A0A087WZ39 114 aa4.17□□□□□ -1.74
TTC39B-203ENST00000380853 IGKV2-30P06310 120 aa4.17□□□□□ -1.74
TTC39B-203ENST00000380853 UBE2BP63146 152 aa4.17□□□□□ -1.74
TTC39B-203ENST00000380853 MRPS36P82909 103 aaKnown RBP4.17□□□□□ -1.74
TTC39B-203ENST00000380853 GAGE2EQ4V326 116 aa4.17□□□□□ -1.74
TTC39B-203ENST00000380853 LCE1EQ5T753 118 aa4.17□□□□□ -1.74
TTC39B-203ENST00000380853 ORMDL3Q8N138 153 aa4.17□□□□□ -1.74
TTC39B-203ENST00000380853 DIRC1Q969H9 104 aa4.17□□□□□ -1.74
TTC39B-203ENST00000380853 PACRGQ96M98 296 aaPredicted RBP4.17□□□□□ -1.74
TTC39B-203ENST00000380853 C2orf88Q9BSF0 95 aa4.17□□□□□ -1.74
TTC39B-203ENST00000380853 GAGE2DQ9UEU5 116 aa4.17□□□□□ -1.74
TTC39B-203ENST00000380853 TRBV24-1A0A075B6N3 115 aa4.16□□□□□ -1.74
TTC39B-203ENST00000380853 M0QXV9 152 aa4.16□□□□□ -1.74
TTC39B-203ENST00000380853 IFITM2Q01629 132 aa4.16□□□□□ -1.74
TTC39B-203ENST00000380853 SRSF9Q13242 221 aaKnown RBP eCLIP4.16□□□□□ -1.74
TTC39B-203ENST00000380853 Q6ZN92 141 aa4.16□□□□□ -1.74
TTC39B-203ENST00000380853 PRELID3AQ96N28 172 aa4.16□□□□□ -1.74
TTC39B-203ENST00000380853 MAP1LC3AQ9H492 121 aa4.16□□□□□ -1.74
TTC39B-203ENST00000380853 DNAH8Q96JB1 4490 aa4.15□□□□□ -1.74
TTC39B-203ENST00000380853 IGHV3OR16-9A0A0B4J2B5 98 aa4.15□□□□□ -1.75
TTC39B-203ENST00000380853 C9JQL5 133 aa4.15□□□□□ -1.75
TTC39B-203ENST00000380853 IGLV7-43P04211 117 aa4.15□□□□□ -1.75
TTC39B-203ENST00000380853 PRSS2P07478 247 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms