RNA–Protein interactions for RNA: ENST00000349225.2

RLIM-202, Transcript of ring finger protein, LIM domain interacting, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RLIM, Length 3,478 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RLIM-202ENST00000349225 ZFHX2Q9C0A1 2572 aaPredicted RBP10.07□□□□□ -0.8
RLIM-202ENST00000349225 EPM2AB3EWF7 344 aa10.06□□□□□ -0.8
RLIM-202ENST00000349225 CCKP06307 115 aa10.06□□□□□ -0.8
RLIM-202ENST00000349225 RPL36AP83881 106 aaKnown RBP10.06□□□□□ -0.8
RLIM-202ENST00000349225 RPL36ALQ969Q0 106 aaKnown RBP10.06□□□□□ -0.8
RLIM-202ENST00000349225 DEFB131AP59861 70 aa10.06□□□□□ -0.8
RLIM-202ENST00000349225 LINC00336Q6ZUF6 198 aa10.06□□□□□ -0.8
RLIM-202ENST00000349225 C20orf197Q8N268 126 aa10.06□□□□□ -0.8
RLIM-202ENST00000349225 CSPG4Q6UVK1 2322 aa10.05□□□□□ -0.8
RLIM-202ENST00000349225 ENHOQ6UWT2 76 aa10.05□□□□□ -0.8
RLIM-202ENST00000349225 OVOL2Q9BRP0 275 aa10.05□□□□□ -0.8
RLIM-202ENST00000349225 PFN2P35080 140 aa10.04□□□□□ -0.8
RLIM-202ENST00000349225 A8MTW9 85 aa10.03□□□□□ -0.8
RLIM-202ENST00000349225 H0YGX0 51 aa10.03□□□□□ -0.8
RLIM-202ENST00000349225 TMEM243Q9BU79 118 aa10.03□□□□□ -0.8
RLIM-202ENST00000349225 H7BZZ5 65 aa10.03□□□□□ -0.8
RLIM-202ENST00000349225 XCL1P47992 114 aa10.03□□□□□ -0.8
RLIM-202ENST00000349225 XCL2Q9UBD3 114 aa10.03□□□□□ -0.8
RLIM-202ENST00000349225 NDUFC2O95298 119 aa10.02□□□□□ -0.8
RLIM-202ENST00000349225 LYPD5Q6UWN5 251 aa10.02□□□□□ -0.8
RLIM-202ENST00000349225 COX7B2Q8TF08 81 aa10.02□□□□□ -0.8
RLIM-202ENST00000349225 TOMM7Q9P0U1 55 aa10.02□□□□□ -0.8
RLIM-202ENST00000349225 TMEM89A2RUT3 159 aa10.02□□□□□ -0.81
RLIM-202ENST00000349225 LINC00158P58513 81 aa10.02□□□□□ -0.81
RLIM-202ENST00000349225 HIVEP3Q5T1R4 2406 aa10.02□□□□□ -0.81
RLIM-202ENST00000349225 NDUFC2-KCTD14E9PQ53 114 aa10.01□□□□□ -0.81
RLIM-202ENST00000349225 IGHV4-61A0A0C4DH41 118 aa10.01□□□□□ -0.81
RLIM-202ENST00000349225 A0A096LNT2 108 aa10.01□□□□□ -0.81
RLIM-202ENST00000349225 MRAPQ8TCY5 172 aa10.01□□□□□ -0.81
RLIM-202ENST00000349225 C16orf95Q9H693 158 aa10.01□□□□□ -0.81
RLIM-202ENST00000349225 ORMDL1Q9P0S3 153 aa10.01□□□□□ -0.81
RLIM-202ENST00000349225 FAM236DA0A1B0GTK5 79 aa10□□□□□ -0.81
RLIM-202ENST00000349225 FAM236CP0DP71 79 aa10□□□□□ -0.81
RLIM-202ENST00000349225 AVPP01185 164 aa9.99□□□□□ -0.81
RLIM-202ENST00000349225 Q6ZTI0 123 aa9.99□□□□□ -0.81
RLIM-202ENST00000349225 FP248Q71RG6 208 aaPredicted RBP9.98□□□□□ -0.81
RLIM-202ENST00000349225 NANOS2P60321 138 aaKnown RBP9.98□□□□□ -0.81
RLIM-202ENST00000349225 LY6G6DO95868 133 aa9.98□□□□□ -0.81
RLIM-202ENST00000349225 LINC00167Q96N53 147 aa9.98□□□□□ -0.81
RLIM-202ENST00000349225 IGKV3OR2-268A0A0C4DH90 116 aa9.97□□□□□ -0.81
RLIM-202ENST00000349225 C18orf65Q6ZTR6 163 aa9.97□□□□□ -0.81
RLIM-202ENST00000349225 NOTCH3Q9UM47 2321 aa9.97□□□□□ -0.81
RLIM-202ENST00000349225 ZANQ9Y493 2812 aa9.97□□□□□ -0.81
RLIM-202ENST00000349225 M0R2N4 97 aa9.97□□□□□ -0.81
RLIM-202ENST00000349225 PAX4O43316 350 aa9.97□□□□□ -0.81
RLIM-202ENST00000349225 PRR3P79522 188 aaKnown RBP9.97□□□□□ -0.81
RLIM-202ENST00000349225 UCNP55089 124 aa9.96□□□□□ -0.81
RLIM-202ENST00000349225 TRBV6-4A0A1B0GX49 114 aa9.96□□□□□ -0.82
RLIM-202ENST00000349225 DEFB136Q30KP8 78 aa9.96□□□□□ -0.82
RLIM-202ENST00000349225 PRO0628Q9UI54 55 aa9.96□□□□□ -0.82
RLIM-202ENST00000349225 MXRA5Q9NR99 2828 aa9.95□□□□□ -0.82
RLIM-202ENST00000349225 IGHV4-59P01825 116 aa9.95□□□□□ -0.82
RLIM-202ENST00000349225 TRGV1A0A0A0MS02 117 aa9.95□□□□□ -0.82
RLIM-202ENST00000349225 K7EQD1 137 aa9.95□□□□□ -0.82
RLIM-202ENST00000349225 SLURP1P55000 103 aa9.95□□□□□ -0.82
RLIM-202ENST00000349225 SERP1Q9Y6X1 66 aa9.95□□□□□ -0.82
RLIM-202ENST00000349225 IGLV4-60A0A075B6I1 120 aa9.94□□□□□ -0.82
RLIM-202ENST00000349225 TRAV10A0A0B4J240 114 aa9.94□□□□□ -0.82
RLIM-202ENST00000349225 IGHV3OR16-9A0A0B4J2B5 98 aa9.94□□□□□ -0.82
RLIM-202ENST00000349225 LOC100131303A0A0U1RQF7 123 aa9.94□□□□□ -0.82
RLIM-202ENST00000349225 J3QLI3 93 aa9.94□□□□□ -0.82
RLIM-202ENST00000349225 IL17DQ8TAD2 202 aa9.94□□□□□ -0.82
RLIM-202ENST00000349225 ATP5EP2Q5VTU8 51 aa9.94□□□□□ -0.82
RLIM-202ENST00000349225 SNURFQ9Y675 71 aa9.94□□□□□ -0.82
RLIM-202ENST00000349225 Q8N814 137 aa9.94□□□□□ -0.82
RLIM-202ENST00000349225 MAP6D1Q9H9H5 199 aa9.93□□□□□ -0.82
RLIM-202ENST00000349225 IBA57-AS1B1ANH7 110 aa9.93□□□□□ -0.82
RLIM-202ENST00000349225 RMI2Q96E14 147 aa9.93□□□□□ -0.82
RLIM-202ENST00000349225 C11orf68Q9H3H3 251 aaKnown RBP9.93□□□□□ -0.82
RLIM-202ENST00000349225 C1orf158Q8N1D5 194 aa9.92□□□□□ -0.82
RLIM-202ENST00000349225 SPG11Q96JI7 2443 aa9.92□□□□□ -0.82
RLIM-202ENST00000349225 LINC00474Q9P2X8 69 aa9.91□□□□□ -0.82
RLIM-202ENST00000349225 NIPBLQ6KC79 2804 aaeCLIP9.91□□□□□ -0.82
RLIM-202ENST00000349225 IGF2RP11717 2491 aa9.91□□□□□ -0.82
RLIM-202ENST00000349225 TRBV10-3A0A0K0K1G6 114 aa9.91□□□□□ -0.82
RLIM-202ENST00000349225 S100A7L2Q5SY68 101 aa9.91□□□□□ -0.82
RLIM-202ENST00000349225 SPATA3Q8NHX4 192 aa9.91□□□□□ -0.82
RLIM-202ENST00000349225 UBE2E2Q96LR5 201 aa9.91□□□□□ -0.82
RLIM-202ENST00000349225 JMJD7-PLA2G4BH0Y9G9 81 aa9.9□□□□□ -0.82
RLIM-202ENST00000349225 RPL35AP18077 110 aaKnown RBP9.9□□□□□ -0.82
RLIM-202ENST00000349225 KLKP1Q107X0 134 aa9.9□□□□□ -0.82
RLIM-202ENST00000349225 INSP01308 110 aa9.9□□□□□ -0.82
RLIM-202ENST00000349225 TRBV10-1A0A0K0K1A3 114 aa9.9□□□□□ -0.83
RLIM-202ENST00000349225 C19orf84I3L1E1 186 aa9.9□□□□□ -0.83
RLIM-202ENST00000349225 WFDC11Q8NEX6 87 aa9.9□□□□□ -0.83
RLIM-202ENST00000349225 TRAV7A0A075B6U4 112 aa9.89□□□□□ -0.83
RLIM-202ENST00000349225 UBE2L6O14933 153 aa9.89□□□□□ -0.83
RLIM-202ENST00000349225 RNASE1P07998 156 aaKnown RBP9.88□□□□□ -0.83
RLIM-202ENST00000349225 A0A087WZ39 114 aa9.88□□□□□ -0.83
RLIM-202ENST00000349225 DEFB112Q30KQ8 113 aa9.88□□□□□ -0.83
RLIM-202ENST00000349225 C1orf43Q9BWL3 253 aa9.88□□□□□ -0.83
RLIM-202ENST00000349225 PKIGQ9Y2B9 76 aa9.88□□□□□ -0.83
RLIM-202ENST00000349225 Q8NDZ9 215 aa9.88□□□□□ -0.83
RLIM-202ENST00000349225 UBL5Q9BZL1 73 aa9.88□□□□□ -0.83
RLIM-202ENST00000349225 F8WEM9 126 aa9.87□□□□□ -0.83
RLIM-202ENST00000349225 TMEM256-PLSCR3K7ERE1 68 aa9.87□□□□□ -0.83
RLIM-202ENST00000349225 Q6ZQT0 140 aa9.87□□□□□ -0.83
RLIM-202ENST00000349225 LINC01547P58512 204 aaPredicted RBP9.87□□□□□ -0.83
RLIM-202ENST00000349225 TMEM86BQ8N661 226 aa9.87□□□□□ -0.83
RLIM-202ENST00000349225 LINC00482Q8N8I6 264 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms