RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 CFHR3Q02985 330 aa6.9□□□□□ -1.31
PTCHD4-201ENST00000339488 CCDC140Q96MF4 163 aa6.9□□□□□ -1.31
PTCHD4-201ENST00000339488 CELSR1Q9NYQ6 3014 aa6.9□□□□□ -1.31
PTCHD4-201ENST00000339488 BBC3Q96PG8 261 aaPredicted RBP6.89□□□□□ -1.31
PTCHD4-201ENST00000339488 LINC00467Q9BRT7 94 aa6.89□□□□□ -1.31
PTCHD4-201ENST00000339488 ITPR1Q14643 2758 aa6.89□□□□□ -1.31
PTCHD4-201ENST00000339488 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.88□□□□□ -1.31
PTCHD4-201ENST00000339488 G3V318 75 aa6.88□□□□□ -1.31
PTCHD4-201ENST00000339488 Q6ZRU5 148 aa6.88□□□□□ -1.31
PTCHD4-201ENST00000339488 MRPL55Q7Z7F7 128 aaKnown RBP6.88□□□□□ -1.31
PTCHD4-201ENST00000339488 FDCSPQ8NFU4 85 aa6.88□□□□□ -1.31
PTCHD4-201ENST00000339488 COPS9Q8WXC6 57 aa6.88□□□□□ -1.31
PTCHD4-201ENST00000339488 UBL5Q9BZL1 73 aa6.88□□□□□ -1.31
PTCHD4-201ENST00000339488 ORMDL1Q9P0S3 153 aa6.88□□□□□ -1.31
PTCHD4-201ENST00000339488 PRM2P04554 102 aa6.88□□□□□ -1.31
PTCHD4-201ENST00000339488 ESRGQ1W209 222 aa6.88□□□□□ -1.31
PTCHD4-201ENST00000339488 ACACBO00763 2458 aa6.88□□□□□ -1.31
PTCHD4-201ENST00000339488 C11orf68Q9H3H3 251 aaKnown RBP6.87□□□□□ -1.31
PTCHD4-201ENST00000339488 RBM12B-AS1Q9P1G2 102 aa6.87□□□□□ -1.31
PTCHD4-201ENST00000339488 CSMD2Q7Z408 3487 aa6.87□□□□□ -1.31
PTCHD4-201ENST00000339488 SND1-IT1Q9HBX3 110 aa6.87□□□□□ -1.31
PTCHD4-201ENST00000339488 MED14OSP0DP75 135 aa6.87□□□□□ -1.31
PTCHD4-201ENST00000339488 ADORA2A-AS1P86434 159 aa6.86□□□□□ -1.31
PTCHD4-201ENST00000339488 APRG1Q8IVJ8 170 aa6.86□□□□□ -1.31
PTCHD4-201ENST00000339488 Q8N3U1 123 aa6.86□□□□□ -1.31
PTCHD4-201ENST00000339488 ATRXP46100 2492 aa6.86□□□□□ -1.31
PTCHD4-201ENST00000339488 ATP5EP2Q5VTU8 51 aa6.86□□□□□ -1.31
PTCHD4-201ENST00000339488 ZNF843Q8N446 348 aa6.86□□□□□ -1.31
PTCHD4-201ENST00000339488 TRBV7-4A0A0J9YYF1 115 aa6.85□□□□□ -1.31
PTCHD4-201ENST00000339488 LINC01547P58512 204 aaPredicted RBP6.85□□□□□ -1.31
PTCHD4-201ENST00000339488 SMIM1B2RUZ4 78 aa6.85□□□□□ -1.31
PTCHD4-201ENST00000339488 LINC01356Q8N9X3 169 aa6.85□□□□□ -1.31
PTCHD4-201ENST00000339488 TLN1Q9Y490 2541 aaKnown RBP6.84□□□□□ -1.31
PTCHD4-201ENST00000339488 IGHV7-81A0A0B4J1V7 117 aa6.84□□□□□ -1.31
PTCHD4-201ENST00000339488 TMEM254Q8TBM7 123 aa6.84□□□□□ -1.31
PTCHD4-201ENST00000339488 CHCHD7Q9BUK0 85 aa6.84□□□□□ -1.31
PTCHD4-201ENST00000339488 TOMM7Q9P0U1 55 aa6.84□□□□□ -1.31
PTCHD4-201ENST00000339488 PKD1L2Q7Z442 2459 aa6.84□□□□□ -1.31
PTCHD4-201ENST00000339488 STHQ8IWL8 128 aa6.84□□□□□ -1.31
PTCHD4-201ENST00000339488 IGHV3-16A0A0C4DH30 117 aa6.83□□□□□ -1.32
PTCHD4-201ENST00000339488 IBA57-AS1B1ANH7 110 aa6.83□□□□□ -1.32
PTCHD4-201ENST00000339488 Q6ZRP5 223 aa6.83□□□□□ -1.32
PTCHD4-201ENST00000339488 Q6ZSN1 163 aa6.83□□□□□ -1.32
PTCHD4-201ENST00000339488 Q8N9L7 120 aa6.83□□□□□ -1.32
PTCHD4-201ENST00000339488 LENEPQ9Y5L5 61 aa6.83□□□□□ -1.32
PTCHD4-201ENST00000339488 EPG5Q9HCE0 2579 aa6.83□□□□□ -1.32
PTCHD4-201ENST00000339488 IGHV3OR16-12A0A075B7B8 117 aa6.83□□□□□ -1.32
PTCHD4-201ENST00000339488 ATP6V0E1O15342 81 aa6.83□□□□□ -1.32
PTCHD4-201ENST00000339488 NANOS2P60321 138 aaKnown RBP6.83□□□□□ -1.32
PTCHD4-201ENST00000339488 NREPQ16612 68 aa6.83□□□□□ -1.32
PTCHD4-201ENST00000339488 ZFYVE26Q68DK2 2539 aa6.83□□□□□ -1.32
PTCHD4-201ENST00000339488 FUSP35637 526 aaKnown RBP eCLIP6.83□□□□□ -1.32
PTCHD4-201ENST00000339488 LINC00242Q5T6M2 205 aa6.83□□□□□ -1.32
PTCHD4-201ENST00000339488 DGAT2L7PQ6IED9 249 aa6.83□□□□□ -1.32
PTCHD4-201ENST00000339488 SEM1Q6ZVN7 128 aa6.83□□□□□ -1.32
PTCHD4-201ENST00000339488 CREBBPQ92793 2442 aa6.82□□□□□ -1.32
PTCHD4-201ENST00000339488 IGLV5-39A0A0G2JS06 123 aa6.82□□□□□ -1.32
PTCHD4-201ENST00000339488 TRBV10-1A0A0K0K1A3 114 aa6.82□□□□□ -1.32
PTCHD4-201ENST00000339488 LINC00158P58513 81 aa6.82□□□□□ -1.32
PTCHD4-201ENST00000339488 NPBQ8NG41 125 aa6.82□□□□□ -1.32
PTCHD4-201ENST00000339488 SPATA3Q8NHX4 192 aa6.82□□□□□ -1.32
PTCHD4-201ENST00000339488 USP24Q9UPU5 2620 aa6.82□□□□□ -1.32
PTCHD4-201ENST00000339488 K7EQG2 157 aa6.81□□□□□ -1.32
PTCHD4-201ENST00000339488 C1orf158Q8N1D5 194 aa6.81□□□□□ -1.32
PTCHD4-201ENST00000339488 DPM3Q9P2X0 92 aa6.81□□□□□ -1.32
PTCHD4-201ENST00000339488 NOTCH3Q9UM47 2321 aa6.81□□□□□ -1.32
PTCHD4-201ENST00000339488 IGKV3OR2-268A0A0C4DH90 116 aa6.81□□□□□ -1.32
PTCHD4-201ENST00000339488 LY6HO94772 140 aa6.81□□□□□ -1.32
PTCHD4-201ENST00000339488 PRR4Q16378 134 aa6.81□□□□□ -1.32
PTCHD4-201ENST00000339488 Q6ZVQ6 151 aa6.81□□□□□ -1.32
PTCHD4-201ENST00000339488 OVOL2Q9BRP0 275 aa6.81□□□□□ -1.32
PTCHD4-201ENST00000339488 CCL18P55774 89 aa6.8□□□□□ -1.32
PTCHD4-201ENST00000339488 PRR3P79522 188 aaKnown RBP6.8□□□□□ -1.32
PTCHD4-201ENST00000339488 SPINK13Q1W4C9 94 aa6.8□□□□□ -1.32
PTCHD4-201ENST00000339488 HIGD2AQ9BW72 106 aa6.8□□□□□ -1.32
PTCHD4-201ENST00000339488 RNF5Q99942 180 aa6.8□□□□□ -1.32
PTCHD4-201ENST00000339488 IGHV3-11P01762 117 aa6.79□□□□□ -1.32
PTCHD4-201ENST00000339488 ATP5EP56381 51 aaPredicted RBP6.79□□□□□ -1.32
PTCHD4-201ENST00000339488 Q6ZTC4 211 aa6.79□□□□□ -1.32
PTCHD4-201ENST00000339488 TRBV10-3A0A0K0K1G6 114 aa6.79□□□□□ -1.32
PTCHD4-201ENST00000339488 KLLNB2CW77 178 aa6.79□□□□□ -1.32
PTCHD4-201ENST00000339488 H0YGX0 51 aa6.79□□□□□ -1.32
PTCHD4-201ENST00000339488 PRYO14603 147 aa6.79□□□□□ -1.32
PTCHD4-201ENST00000339488 NDUFC1O43677 76 aa6.79□□□□□ -1.32
PTCHD4-201ENST00000339488 SPTAN1Q13813 2472 aaKnown RBP6.79□□□□□ -1.32
PTCHD4-201ENST00000339488 SPTSSBQ8NFR3 76 aa6.79□□□□□ -1.32
PTCHD4-201ENST00000339488 APOC4P55056 127 aa6.78□□□□□ -1.32
PTCHD4-201ENST00000339488 Q8N9W7 124 aa6.78□□□□□ -1.32
PTCHD4-201ENST00000339488 NBASA2RRP1 2371 aa6.78□□□□□ -1.32
PTCHD4-201ENST00000339488 IGLV5-45A0A087WSX0 123 aa6.78□□□□□ -1.32
PTCHD4-201ENST00000339488 A8MUN3 132 aa6.78□□□□□ -1.32
PTCHD4-201ENST00000339488 UBE2E2Q96LR5 201 aa6.78□□□□□ -1.32
PTCHD4-201ENST00000339488 BSPH1Q075Z2 132 aa6.77□□□□□ -1.33
PTCHD4-201ENST00000339488 H3BS24 57 aa6.77□□□□□ -1.33
PTCHD4-201ENST00000339488 Q8N6K4 173 aa6.77□□□□□ -1.33
PTCHD4-201ENST00000339488 CFAP46Q8IYW2 2715 aa6.77□□□□□ -1.33
PTCHD4-201ENST00000339488 A8MTW9 85 aa6.76□□□□□ -1.33
PTCHD4-201ENST00000339488 E7EQL1 145 aa6.76□□□□□ -1.33
PTCHD4-201ENST00000339488 A0A096LNT2 108 aa6.76□□□□□ -1.33
PTCHD4-201ENST00000339488 TRAV22A0A0B4J277 110 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms