RNA–Protein interactions for RNA: ENST00000316052.5

EXOSC4-201, Transcript of exosome component 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC4, Length 887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-201ENST00000316052 CAMPP49913 170 aa10.79□□□□□ -0.68
EXOSC4-201ENST00000316052 NUP35Q8NFH5 326 aa10.79□□□□□ -0.68
EXOSC4-201ENST00000316052 A0A1W2PNN7 141 aa10.78□□□□□ -0.68
EXOSC4-201ENST00000316052 VCYO14598 125 aa10.78□□□□□ -0.68
EXOSC4-201ENST00000316052 GAGE2BQ13066 116 aa10.78□□□□□ -0.68
EXOSC4-201ENST00000316052 RNASE13Q5GAN3 156 aaKnown RBP10.78□□□□□ -0.68
EXOSC4-201ENST00000316052 REG3GQ6UW15 175 aa10.78□□□□□ -0.68
EXOSC4-201ENST00000316052 A0A1B0GW15 77 aa10.77□□□□□ -0.69
EXOSC4-201ENST00000316052 NRACQ8N912 160 aa10.77□□□□□ -0.69
EXOSC4-201ENST00000316052 LOC107984640A0A0U1RRK4 108 aa10.76□□□□□ -0.69
EXOSC4-201ENST00000316052 LOC105371267A0A1B0GV96 52 aa10.76□□□□□ -0.69
EXOSC4-201ENST00000316052 A0A1B0GXF2 115 aa10.76□□□□□ -0.69
EXOSC4-201ENST00000316052 COX7A2LO14548 114 aa10.76□□□□□ -0.69
EXOSC4-201ENST00000316052 MALP21145 153 aa10.76□□□□□ -0.69
EXOSC4-201ENST00000316052 UBE2D4Q9Y2X8 147 aa10.76□□□□□ -0.69
EXOSC4-201ENST00000316052 CSDC2Q9Y534 153 aaKnown RBP10.76□□□□□ -0.69
EXOSC4-201ENST00000316052 TRAPPC1Q9Y5R8 145 aa10.76□□□□□ -0.69
EXOSC4-201ENST00000316052 S100A8P05109 93 aa10.75□□□□□ -0.69
EXOSC4-201ENST00000316052 FCER1GP30273 86 aa10.75□□□□□ -0.69
EXOSC4-201ENST00000316052 RIGQ13278 110 aa10.75□□□□□ -0.69
EXOSC4-201ENST00000316052 TRAV13-1A0A0B4J241 112 aa10.74□□□□□ -0.69
EXOSC4-201ENST00000316052 HIST1H2BKO60814 126 aa10.74□□□□□ -0.69
EXOSC4-201ENST00000316052 S100A6P06703 90 aa10.74□□□□□ -0.69
EXOSC4-201ENST00000316052 HIST1H2BJP06899 126 aa10.74□□□□□ -0.69
EXOSC4-201ENST00000316052 HIST1H2BOP23527 126 aa10.74□□□□□ -0.69
EXOSC4-201ENST00000316052 HIST1H2BBP33778 126 aa10.74□□□□□ -0.69
EXOSC4-201ENST00000316052 HIST1H2BDP58876 126 aa10.74□□□□□ -0.69
EXOSC4-201ENST00000316052 SUMO2P61956 95 aaKnown RBP10.74□□□□□ -0.69
EXOSC4-201ENST00000316052 HIST1H2BCP62807 126 aa10.74□□□□□ -0.69
EXOSC4-201ENST00000316052 HIST2H2BEQ16778 126 aa10.74□□□□□ -0.69
EXOSC4-201ENST00000316052 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.74□□□□□ -0.69
EXOSC4-201ENST00000316052 TMEM136Q6ZRR5 245 aa10.74□□□□□ -0.69
EXOSC4-201ENST00000316052 C5orf38Q86SI9 138 aa10.74□□□□□ -0.69
EXOSC4-201ENST00000316052 HIST1H2BHQ93079 126 aa10.74□□□□□ -0.69
EXOSC4-201ENST00000316052 HIST1H2BNQ99877 126 aa10.74□□□□□ -0.69
EXOSC4-201ENST00000316052 HIST1H2BMQ99879 126 aa10.74□□□□□ -0.69
EXOSC4-201ENST00000316052 C5orf52A6NGY3 159 aa10.73□□□□□ -0.69
EXOSC4-201ENST00000316052 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.73□□□□□ -0.69
EXOSC4-201ENST00000316052 HBBP68871 147 aa10.73□□□□□ -0.69
EXOSC4-201ENST00000316052 FABP9Q0Z7S8 132 aa10.73□□□□□ -0.69
EXOSC4-201ENST00000316052 COA6Q5JTJ3 125 aaKnown RBP10.73□□□□□ -0.69
EXOSC4-201ENST00000316052 CAMK2N2Q96S95 79 aa10.73□□□□□ -0.69
EXOSC4-201ENST00000316052 LPAP08519 4548 aa10.73□□□□□ -0.69
EXOSC4-201ENST00000316052 APOMO95445 188 aa10.72□□□□□ -0.69
EXOSC4-201ENST00000316052 C9orf116Q5BN46 136 aaPredicted RBP10.72□□□□□ -0.69
EXOSC4-201ENST00000316052 Q6ZUT4 128 aa10.72□□□□□ -0.69
EXOSC4-201ENST00000316052 C2orf48Q96LS8 159 aa10.72□□□□□ -0.69
EXOSC4-201ENST00000316052 MRPL18Q9H0U6 180 aaKnown RBP10.72□□□□□ -0.69
EXOSC4-201ENST00000316052 PPP1R17O96001 155 aa10.71□□□□□ -0.69
EXOSC4-201ENST00000316052 MRPL51Q4U2R6 128 aaKnown RBP10.71□□□□□ -0.69
EXOSC4-201ENST00000316052 MRPL54Q6P161 138 aaKnown RBP10.71□□□□□ -0.69
EXOSC4-201ENST00000316052 FAM104AQ969W3 186 aa10.71□□□□□ -0.69
EXOSC4-201ENST00000316052 KIR2DL4Q99706 377 aa10.71□□□□□ -0.69
EXOSC4-201ENST00000316052 OPRPNQ99935 248 aaPredicted RBP10.71□□□□□ -0.69
EXOSC4-201ENST00000316052 PSORS1C2Q9UIG4 136 aa10.71□□□□□ -0.69
EXOSC4-201ENST00000316052 FAM104BQ5XKR9 115 aa10.7□□□□□ -0.7
EXOSC4-201ENST00000316052 TIMM21Q9BVV7 248 aa10.7□□□□□ -0.7
EXOSC4-201ENST00000316052 RPL18AQ02543 176 aaKnown RBP10.69□□□□□ -0.7
EXOSC4-201ENST00000316052 SMAGPQ0VAQ4 97 aa10.69□□□□□ -0.7
EXOSC4-201ENST00000316052 PHF5AQ7RTV0 110 aaKnown RBP10.69□□□□□ -0.7
EXOSC4-201ENST00000316052 RPL39P62891 51 aaKnown RBP10.68□□□□□ -0.7
EXOSC4-201ENST00000316052 NDUFA6P56556 154 aa10.67□□□□□ -0.7
EXOSC4-201ENST00000316052 SNRPEP62304 92 aaKnown RBP10.67□□□□□ -0.7
EXOSC4-201ENST00000316052 SPAG11BQ08648 103 aa10.67□□□□□ -0.7
EXOSC4-201ENST00000316052 RNF151Q2KHN1 245 aa10.67□□□□□ -0.7
EXOSC4-201ENST00000316052 C20orf78Q9BR46 151 aa10.66□□□□□ -0.7
EXOSC4-201ENST00000316052 C1orf137Q5JT78 98 aa10.65□□□□□ -0.7
EXOSC4-201ENST00000316052 OR10D4PQ8NGN7 298 aa10.65□□□□□ -0.7
EXOSC4-201ENST00000316052 TMEM18Q96B42 140 aa10.65□□□□□ -0.7
EXOSC4-201ENST00000316052 IGHV3OR16-9A0A0B4J2B5 98 aa10.64□□□□□ -0.71
EXOSC4-201ENST00000316052 TNFRSF6BO95407 300 aa10.64□□□□□ -0.71
EXOSC4-201ENST00000316052 CKS2P33552 79 aa10.64□□□□□ -0.71
EXOSC4-201ENST00000316052 RPL32P62910 135 aaKnown RBP10.64□□□□□ -0.71
EXOSC4-201ENST00000316052 C10orf25Q5T742 122 aa10.64□□□□□ -0.71
EXOSC4-201ENST00000316052 KRTAP11-1Q8IUC1 163 aa10.64□□□□□ -0.71
EXOSC4-201ENST00000316052 ORAOV1Q8WV07 137 aa10.64□□□□□ -0.71
EXOSC4-201ENST00000316052 MRPL35Q9NZE8 188 aaKnown RBP10.64□□□□□ -0.71
EXOSC4-201ENST00000316052 FAM168BA1KXE4 195 aa10.63□□□□□ -0.71
EXOSC4-201ENST00000316052 D6R8Y8 96 aa10.61□□□□□ -0.71
EXOSC4-201ENST00000316052 UNQ6190/PRO20217Q6UXQ8 127 aa10.61□□□□□ -0.71
EXOSC4-201ENST00000316052 HIST3H2BBQ8N257 126 aa10.61□□□□□ -0.71
EXOSC4-201ENST00000316052 ALKBH7Q9BT30 221 aaPredicted RBP10.61□□□□□ -0.71
EXOSC4-201ENST00000316052 SMIM2Q9BVW6 85 aa10.61□□□□□ -0.71
EXOSC4-201ENST00000316052 SPANXA1Q9NS26 97 aa10.61□□□□□ -0.71
EXOSC4-201ENST00000316052 F8WDY8 70 aa10.6□□□□□ -0.71
EXOSC4-201ENST00000316052 TCAPO15273 167 aa10.6□□□□□ -0.71
EXOSC4-201ENST00000316052 NPYP01303 97 aa10.6□□□□□ -0.71
EXOSC4-201ENST00000316052 IGLV7-43P04211 117 aa10.6□□□□□ -0.71
EXOSC4-201ENST00000316052 MRPS36P82909 103 aaKnown RBP10.6□□□□□ -0.71
EXOSC4-201ENST00000316052 PRR26Q8N8Z3 221 aa10.6□□□□□ -0.71
EXOSC4-201ENST00000316052 PACRGQ96M98 296 aaPredicted RBP10.6□□□□□ -0.71
EXOSC4-201ENST00000316052 C6orf48Q9UBA6 75 aa10.6□□□□□ -0.71
EXOSC4-201ENST00000316052 NDUFA1O15239 70 aa10.59□□□□□ -0.71
EXOSC4-201ENST00000316052 KRTAP7-1Q8IUC3 87 aa10.59□□□□□ -0.71
EXOSC4-201ENST00000316052 A0A087WZ39 114 aa10.58□□□□□ -0.72
EXOSC4-201ENST00000316052 IFITM10A6NMD0 228 aa10.58□□□□□ -0.72
EXOSC4-201ENST00000316052 PPBPP02775 128 aa10.58□□□□□ -0.72
EXOSC4-201ENST00000316052 TLX1NBP0CAT3 122 aa10.58□□□□□ -0.72
EXOSC4-201ENST00000316052 S100A2P29034 98 aa10.58□□□□□ -0.72
EXOSC4-201ENST00000316052 KIAA1644Q3SXP7 199 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms