RNA–Protein interactions for RNA: ENST00000628347.1

SOX2-OT-247, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 445 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-247ENST00000628347 ALKAL2Q6UX46 152 aa7.85□□□□□ -1.15
SOX2-OT-247ENST00000628347 TSKUQ8WUA8 353 aa7.85□□□□□ -1.15
SOX2-OT-247ENST00000628347 BORCS7Q96B45 105 aa7.85□□□□□ -1.15
SOX2-OT-247ENST00000628347 TMEM101Q96IK0 257 aa7.85□□□□□ -1.15
SOX2-OT-247ENST00000628347 BTF3L4Q96K17 158 aa7.85□□□□□ -1.15
SOX2-OT-247ENST00000628347 TMEM191AQ9H0A3 160 aa7.85□□□□□ -1.15
SOX2-OT-247ENST00000628347 ST20Q9HBF5 79 aa7.85□□□□□ -1.15
SOX2-OT-247ENST00000628347 PKIGQ9Y2B9 76 aa7.85□□□□□ -1.15
SOX2-OT-247ENST00000628347 IGHV1-58A0A0C4DH39 117 aa7.84□□□□□ -1.15
SOX2-OT-247ENST00000628347 LINC00959A0A1B0GUT2 108 aa7.84□□□□□ -1.15
SOX2-OT-247ENST00000628347 A0A1B0GUT8 65 aa7.84□□□□□ -1.15
SOX2-OT-247ENST00000628347 GAS8-AS1O95177 125 aa7.84□□□□□ -1.15
SOX2-OT-247ENST00000628347 MAJINQ3KP22 176 aa7.84□□□□□ -1.15
SOX2-OT-247ENST00000628347 MRPL52Q86TS9 123 aaKnown RBP7.84□□□□□ -1.15
SOX2-OT-247ENST00000628347 AKAP14Q86UN6 197 aa7.84□□□□□ -1.15
SOX2-OT-247ENST00000628347 MRAP2Q96G30 205 aa7.84□□□□□ -1.15
SOX2-OT-247ENST00000628347 TRBV27A0A0K0K1C4 114 aa7.83□□□□□ -1.16
SOX2-OT-247ENST00000628347 HIGD1CA8MV81 97 aa7.83□□□□□ -1.16
SOX2-OT-247ENST00000628347 CCL25O15444 150 aa7.83□□□□□ -1.16
SOX2-OT-247ENST00000628347 LINC01551Q86U37 167 aa7.83□□□□□ -1.16
SOX2-OT-247ENST00000628347 SMIM7Q9BQ49 75 aa7.83□□□□□ -1.16
SOX2-OT-247ENST00000628347 OSTCQ9NRP0 149 aa7.83□□□□□ -1.16
SOX2-OT-247ENST00000628347 CDC42SE2Q9NRR3 84 aa7.83□□□□□ -1.16
SOX2-OT-247ENST00000628347 TMEM242Q9NWH2 141 aa7.83□□□□□ -1.16
SOX2-OT-247ENST00000628347 A0A096LNI7 61 aa7.82□□□□□ -1.16
SOX2-OT-247ENST00000628347 IGKV2-24A0A0C4DH68 120 aa7.82□□□□□ -1.16
SOX2-OT-247ENST00000628347 RAB4AP20338 218 aa7.82□□□□□ -1.16
SOX2-OT-247ENST00000628347 XCL1P47992 114 aa7.82□□□□□ -1.16
SOX2-OT-247ENST00000628347 STPG4Q8N801 248 aa7.82□□□□□ -1.16
SOX2-OT-247ENST00000628347 LINC00474Q9P2X8 69 aa7.82□□□□□ -1.16
SOX2-OT-247ENST00000628347 LRP2P98164 4655 aa7.81□□□□□ -1.16
SOX2-OT-247ENST00000628347 C7orf77A4D0Y5 90 aa7.81□□□□□ -1.16
SOX2-OT-247ENST00000628347 CEBPGP53567 150 aa7.81□□□□□ -1.16
SOX2-OT-247ENST00000628347 PRR3P79522 188 aaKnown RBP7.81□□□□□ -1.16
SOX2-OT-247ENST00000628347 SS18Q15532 418 aa7.81□□□□□ -1.16
SOX2-OT-247ENST00000628347 CD164L2Q6UWJ8 174 aa7.81□□□□□ -1.16
SOX2-OT-247ENST00000628347 EIF5A2Q9GZV4 153 aaKnown RBP7.81□□□□□ -1.16
SOX2-OT-247ENST00000628347 SRP19P09132 144 aaKnown RBP7.8□□□□□ -1.16
SOX2-OT-247ENST00000628347 AMN1Q8IY45 258 aa7.8□□□□□ -1.16
SOX2-OT-247ENST00000628347 ZNF664Q8N3J9 261 aa7.8□□□□□ -1.16
SOX2-OT-247ENST00000628347 CARD19Q96LW7 228 aa7.8□□□□□ -1.16
SOX2-OT-247ENST00000628347 CSDC2Q9Y534 153 aaKnown RBP7.8□□□□□ -1.16
SOX2-OT-247ENST00000628347 ZNF727A8MUV8 499 aa7.79□□□□□ -1.16
SOX2-OT-247ENST00000628347 VCYO14598 125 aa7.79□□□□□ -1.16
SOX2-OT-247ENST00000628347 PPP1R17O96001 155 aa7.79□□□□□ -1.16
SOX2-OT-247ENST00000628347 RIGQ13278 110 aa7.79□□□□□ -1.16
SOX2-OT-247ENST00000628347 V9GYV3 84 aa7.79□□□□□ -1.16
SOX2-OT-247ENST00000628347 ZNF561-AS1K7EIQ3 104 aa7.78□□□□□ -1.16
SOX2-OT-247ENST00000628347 SYCNQ0VAF6 134 aa7.78□□□□□ -1.16
SOX2-OT-247ENST00000628347 SMAGPQ0VAQ4 97 aa7.78□□□□□ -1.16
SOX2-OT-247ENST00000628347 NRACQ8N912 160 aa7.78□□□□□ -1.16
SOX2-OT-247ENST00000628347 NUP35Q8NFH5 326 aa7.78□□□□□ -1.16
SOX2-OT-247ENST00000628347 LINC01600Q96MT4 127 aa7.78□□□□□ -1.16
SOX2-OT-247ENST00000628347 C1orf196B1AJZ1 125 aa7.77□□□□□ -1.17
SOX2-OT-247ENST00000628347 PPP1R2P9O14990 202 aa7.77□□□□□ -1.17
SOX2-OT-247ENST00000628347 SUMO2P61956 95 aaKnown RBP7.77□□□□□ -1.17
SOX2-OT-247ENST00000628347 ISOC2Q96AB3 205 aa7.77□□□□□ -1.17
SOX2-OT-247ENST00000628347 LINC00526Q96FQ7 95 aa7.77□□□□□ -1.17
SOX2-OT-247ENST00000628347 UBE2D4Q9Y2X8 147 aa7.77□□□□□ -1.17
SOX2-OT-247ENST00000628347 SMKR1H3BMG3 65 aa7.76□□□□□ -1.17
SOX2-OT-247ENST00000628347 FCER1GP30273 86 aa7.76□□□□□ -1.17
SOX2-OT-247ENST00000628347 CAMPP49913 170 aa7.76□□□□□ -1.17
SOX2-OT-247ENST00000628347 FAM74A3Q4VXF1 159 aa7.76□□□□□ -1.17
SOX2-OT-247ENST00000628347 KIR2DL4Q99706 377 aa7.76□□□□□ -1.17
SOX2-OT-247ENST00000628347 NAT8BQ9UHF3 227 aa7.76□□□□□ -1.17
SOX2-OT-247ENST00000628347 LOC107984640A0A0U1RRK4 108 aa7.75□□□□□ -1.17
SOX2-OT-247ENST00000628347 COX7A2LO14548 114 aa7.75□□□□□ -1.17
SOX2-OT-247ENST00000628347 PTTG1IPP53801 180 aa7.75□□□□□ -1.17
SOX2-OT-247ENST00000628347 RPL23P62829 140 aaKnown RBP7.75□□□□□ -1.17
SOX2-OT-247ENST00000628347 RPL32P62910 135 aaKnown RBP7.75□□□□□ -1.17
SOX2-OT-247ENST00000628347 TMEM241Q24JQ0 296 aa7.75□□□□□ -1.17
SOX2-OT-247ENST00000628347 FAM104BQ5XKR9 115 aa7.75□□□□□ -1.17
SOX2-OT-247ENST00000628347 SPINK6Q6UWN8 80 aa7.75□□□□□ -1.17
SOX2-OT-247ENST00000628347 TIMM21Q9BVV7 248 aa7.75□□□□□ -1.17
SOX2-OT-247ENST00000628347 hCG_2014768A0A024R1R8 64 aa7.74□□□□□ -1.17
SOX2-OT-247ENST00000628347 IGLV4-69A0A075B6H9 119 aa7.74□□□□□ -1.17
SOX2-OT-247ENST00000628347 LINC00862A6NCI5 91 aa7.74□□□□□ -1.17
SOX2-OT-247ENST00000628347 MALP21145 153 aa7.74□□□□□ -1.17
SOX2-OT-247ENST00000628347 SRSF9Q13242 221 aaKnown RBP eCLIP7.74□□□□□ -1.17
SOX2-OT-247ENST00000628347 MRPL51Q4U2R6 128 aaKnown RBP7.74□□□□□ -1.17
SOX2-OT-247ENST00000628347 Q6ZRP5 223 aa7.74□□□□□ -1.17
SOX2-OT-247ENST00000628347 TMEM18Q96B42 140 aa7.74□□□□□ -1.17
SOX2-OT-247ENST00000628347 C2orf48Q96LS8 159 aa7.74□□□□□ -1.17
SOX2-OT-247ENST00000628347 C20orf78Q9BR46 151 aa7.74□□□□□ -1.17
SOX2-OT-247ENST00000628347 TRBV24-1A0A075B6N3 115 aa7.73□□□□□ -1.17
SOX2-OT-247ENST00000628347 A0A0J9YXV3 536 aa7.73□□□□□ -1.17
SOX2-OT-247ENST00000628347 A0A1B0GW15 77 aa7.73□□□□□ -1.17
SOX2-OT-247ENST00000628347 SMIM27A0A1W2PRY6 76 aa7.73□□□□□ -1.17
SOX2-OT-247ENST00000628347 TCAPO15273 167 aa7.73□□□□□ -1.17
SOX2-OT-247ENST00000628347 REG3GQ6UW15 175 aa7.73□□□□□ -1.17
SOX2-OT-247ENST00000628347 KRTAP10-8P60410 259 aa7.72□□□□□ -1.17
SOX2-OT-247ENST00000628347 Q6ZUT4 128 aa7.72□□□□□ -1.17
SOX2-OT-247ENST00000628347 NAT8Q9UHE5 227 aa7.72□□□□□ -1.17
SOX2-OT-247ENST00000628347 TRAV13-1A0A0B4J241 112 aa7.71□□□□□ -1.18
SOX2-OT-247ENST00000628347 APOMO95445 188 aa7.71□□□□□ -1.18
SOX2-OT-247ENST00000628347 GAGE2BQ13066 116 aa7.71□□□□□ -1.18
SOX2-OT-247ENST00000628347 ADIRFQ15847 76 aa7.71□□□□□ -1.18
SOX2-OT-247ENST00000628347 RNF151Q2KHN1 245 aa7.71□□□□□ -1.18
SOX2-OT-247ENST00000628347 RNASE13Q5GAN3 156 aaKnown RBP7.71□□□□□ -1.18
SOX2-OT-247ENST00000628347 CAMK2N2Q96S95 79 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms