RNA–Protein interactions for RNA: ENST00000625245.2

SMN1-211, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN1, Length 885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-211ENST00000625245 ST20Q9HBF5 79 aa11.78□□□□□ -0.52
SMN1-211ENST00000625245 TRBV6-5A0A0K0K1A5 114 aa11.77□□□□□ -0.53
SMN1-211ENST00000625245 GAS8-AS1O95177 125 aa11.77□□□□□ -0.53
SMN1-211ENST00000625245 TSHBP01222 138 aa11.77□□□□□ -0.53
SMN1-211ENST00000625245 ESDP10768 282 aa11.77□□□□□ -0.53
SMN1-211ENST00000625245 A8MWL6 223 aa11.76□□□□□ -0.53
SMN1-211ENST00000625245 GAGE2BQ13066 116 aa11.76□□□□□ -0.53
SMN1-211ENST00000625245 SRSF9Q13242 221 aaKnown RBP eCLIP11.76□□□□□ -0.53
SMN1-211ENST00000625245 CD164L2Q6UWJ8 174 aa11.76□□□□□ -0.53
SMN1-211ENST00000625245 BORCS7Q96B45 105 aa11.76□□□□□ -0.53
SMN1-211ENST00000625245 RNF213Q63HN8 5207 aa11.76□□□□□ -0.53
SMN1-211ENST00000625245 SLC51BQ86UW2 128 aa11.75□□□□□ -0.53
SMN1-211ENST00000625245 ZNF664Q8N3J9 261 aa11.75□□□□□ -0.53
SMN1-211ENST00000625245 CDC42SE2Q9NRR3 84 aa11.75□□□□□ -0.53
SMN1-211ENST00000625245 CAMPP49913 170 aa11.74□□□□□ -0.53
SMN1-211ENST00000625245 PTTG1IPP53801 180 aa11.74□□□□□ -0.53
SMN1-211ENST00000625245 LOC107984640A0A0U1RRK4 108 aa11.73□□□□□ -0.53
SMN1-211ENST00000625245 MALP21145 153 aa11.73□□□□□ -0.53
SMN1-211ENST00000625245 CEBPGP53567 150 aa11.73□□□□□ -0.53
SMN1-211ENST00000625245 FAM231DQ6ZW35 169 aa11.73□□□□□ -0.53
SMN1-211ENST00000625245 ISOC2Q96AB3 205 aa11.73□□□□□ -0.53
SMN1-211ENST00000625245 IGLV4-69A0A075B6H9 119 aa11.72□□□□□ -0.53
SMN1-211ENST00000625245 C7orf77A4D0Y5 90 aa11.72□□□□□ -0.53
SMN1-211ENST00000625245 MRPL52Q86TS9 123 aaKnown RBP11.72□□□□□ -0.53
SMN1-211ENST00000625245 POLR2KP53803 58 aaKnown RBP11.71□□□□□ -0.53
SMN1-211ENST00000625245 FAM210AQ96ND0 272 aa11.71□□□□□ -0.53
SMN1-211ENST00000625245 A0A1B0GUT8 65 aa11.7□□□□□ -0.54
SMN1-211ENST00000625245 A0A1W2PNN7 141 aa11.7□□□□□ -0.54
SMN1-211ENST00000625245 TMEM250H0YL14 139 aa11.7□□□□□ -0.54
SMN1-211ENST00000625245 COX7A2LO14548 114 aa11.7□□□□□ -0.54
SMN1-211ENST00000625245 TMEM191AQ9H0A3 160 aa11.7□□□□□ -0.54
SMN1-211ENST00000625245 TRBV27A0A0K0K1C4 114 aa11.69□□□□□ -0.54
SMN1-211ENST00000625245 C1orf196B1AJZ1 125 aa11.69□□□□□ -0.54
SMN1-211ENST00000625245 RAB4AP20338 218 aa11.69□□□□□ -0.54
SMN1-211ENST00000625245 FCER1GP30273 86 aa11.69□□□□□ -0.54
SMN1-211ENST00000625245 CT83Q5H943 113 aa11.69□□□□□ -0.54
SMN1-211ENST00000625245 CAMK2N2Q96S95 79 aa11.69□□□□□ -0.54
SMN1-211ENST00000625245 HIGD1CA8MV81 97 aa11.68□□□□□ -0.54
SMN1-211ENST00000625245 RNASE13Q5GAN3 156 aaKnown RBP11.68□□□□□ -0.54
SMN1-211ENST00000625245 AMN1Q8IY45 258 aa11.68□□□□□ -0.54
SMN1-211ENST00000625245 TCTE3Q8IZS6 198 aa11.68□□□□□ -0.54
SMN1-211ENST00000625245 NUP35Q8NFH5 326 aa11.68□□□□□ -0.54
SMN1-211ENST00000625245 TRAV13-1A0A0B4J241 112 aa11.67□□□□□ -0.54
SMN1-211ENST00000625245 SMKR1H3BMG3 65 aa11.67□□□□□ -0.54
SMN1-211ENST00000625245 VCYO14598 125 aa11.67□□□□□ -0.54
SMN1-211ENST00000625245 MT-ND6P03923 174 aa11.67□□□□□ -0.54
SMN1-211ENST00000625245 APOMO95445 188 aa11.66□□□□□ -0.54
SMN1-211ENST00000625245 BLOC1S1P78537 153 aa11.66□□□□□ -0.54
SMN1-211ENST00000625245 RPL18AQ02543 176 aaKnown RBP11.66□□□□□ -0.54
SMN1-211ENST00000625245 C9orf116Q5BN46 136 aaPredicted RBP11.66□□□□□ -0.54
SMN1-211ENST00000625245 C5orf38Q86SI9 138 aa11.66□□□□□ -0.54
SMN1-211ENST00000625245 TSKUQ8WUA8 353 aa11.66□□□□□ -0.54
SMN1-211ENST00000625245 PSORS1C2Q9UIG4 136 aa11.66□□□□□ -0.54
SMN1-211ENST00000625245 SMAGPQ0VAQ4 97 aa11.65□□□□□ -0.54
SMN1-211ENST00000625245 OPRPNQ99935 248 aaPredicted RBP11.65□□□□□ -0.54
SMN1-211ENST00000625245 ALKAL2Q6UX46 152 aa11.64□□□□□ -0.55
SMN1-211ENST00000625245 SMIM7Q9BQ49 75 aa11.64□□□□□ -0.55
SMN1-211ENST00000625245 UBE2D4Q9Y2X8 147 aa11.64□□□□□ -0.55
SMN1-211ENST00000625245 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.63□□□□□ -0.55
SMN1-211ENST00000625245 RIGQ13278 110 aa11.63□□□□□ -0.55
SMN1-211ENST00000625245 C1orf137Q5JT78 98 aa11.63□□□□□ -0.55
SMN1-211ENST00000625245 PHF5AQ7RTV0 110 aaKnown RBP11.63□□□□□ -0.55
SMN1-211ENST00000625245 C2orf48Q96LS8 159 aa11.63□□□□□ -0.55
SMN1-211ENST00000625245 CSDC2Q9Y534 153 aaKnown RBP11.63□□□□□ -0.55
SMN1-211ENST00000625245 SUMO2P61956 95 aaKnown RBP11.62□□□□□ -0.55
SMN1-211ENST00000625245 SPAG11BQ08648 103 aa11.62□□□□□ -0.55
SMN1-211ENST00000625245 LINC01551Q86U37 167 aa11.62□□□□□ -0.55
SMN1-211ENST00000625245 KIR2DL4Q99706 377 aa11.62□□□□□ -0.55
SMN1-211ENST00000625245 EIF5A2Q9GZV4 153 aaKnown RBP11.62□□□□□ -0.55
SMN1-211ENST00000625245 OSTCQ9NRP0 149 aa11.62□□□□□ -0.55
SMN1-211ENST00000625245 PPP1R17O96001 155 aa11.61□□□□□ -0.55
SMN1-211ENST00000625245 Q6ZUT4 128 aa11.61□□□□□ -0.55
SMN1-211ENST00000625245 NRACQ8N912 160 aa11.61□□□□□ -0.55
SMN1-211ENST00000625245 ZNF727A8MUV8 499 aa11.6□□□□□ -0.55
SMN1-211ENST00000625245 TMEM18Q96B42 140 aa11.59□□□□□ -0.55
SMN1-211ENST00000625245 PPP1R2P9O14990 202 aa11.57□□□□□ -0.56
SMN1-211ENST00000625245 RNF151Q2KHN1 245 aa11.57□□□□□ -0.56
SMN1-211ENST00000625245 MRPL51Q4U2R6 128 aaKnown RBP11.57□□□□□ -0.56
SMN1-211ENST00000625245 ORAOV1Q8WV07 137 aa11.57□□□□□ -0.56
SMN1-211ENST00000625245 V9GYV3 84 aa11.57□□□□□ -0.56
SMN1-211ENST00000625245 PRR26Q8N8Z3 221 aa11.56□□□□□ -0.56
SMN1-211ENST00000625245 TIMM21Q9BVV7 248 aa11.56□□□□□ -0.56
SMN1-211ENST00000625245 A0A087WZ39 114 aa11.55□□□□□ -0.56
SMN1-211ENST00000625245 IGLV7-43P04211 117 aa11.55□□□□□ -0.56
SMN1-211ENST00000625245 SRP19P09132 144 aaKnown RBP11.55□□□□□ -0.56
SMN1-211ENST00000625245 OR10D4PQ8NGN7 298 aa11.55□□□□□ -0.56
SMN1-211ENST00000625245 DIRC1Q969H9 104 aa11.55□□□□□ -0.56
SMN1-211ENST00000625245 RPL39P62891 51 aaKnown RBP11.54□□□□□ -0.56
SMN1-211ENST00000625245 FAM104BQ5XKR9 115 aa11.54□□□□□ -0.56
SMN1-211ENST00000625245 IMMP2LQ96T52 175 aa11.54□□□□□ -0.56
SMN1-211ENST00000625245 MRPL35Q9NZE8 188 aaKnown RBP11.54□□□□□ -0.56
SMN1-211ENST00000625245 NAT8BQ9UHF3 227 aa11.54□□□□□ -0.56
SMN1-211ENST00000625245 LPAP08519 4548 aa11.54□□□□□ -0.56
SMN1-211ENST00000625245 FAM168BA1KXE4 195 aa11.53□□□□□ -0.56
SMN1-211ENST00000625245 NDUFA1O15239 70 aa11.53□□□□□ -0.56
SMN1-211ENST00000625245 CKS2P33552 79 aa11.52□□□□□ -0.57
SMN1-211ENST00000625245 C10orf25Q5T742 122 aa11.52□□□□□ -0.57
SMN1-211ENST00000625245 C20orf78Q9BR46 151 aa11.52□□□□□ -0.57
SMN1-211ENST00000625245 LINC00862A6NCI5 91 aa11.51□□□□□ -0.57
SMN1-211ENST00000625245 F8WDY8 70 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms