RNA–Protein interactions for RNA: ENST00000601357.6

SSBP4-209, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 606 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-209ENST00000601357 FAT3Q8TDW7 4589 aa14.43□□□□□ -0.1
SSBP4-209ENST00000601357 GVQW2A0A096LPI5 108 aaPredicted RBP14.42□□□□□ -0.1
SSBP4-209ENST00000601357 NRACQ8N912 160 aa14.42□□□□□ -0.1
SSBP4-209ENST00000601357 SPACA4Q8TDM5 124 aa14.42□□□□□ -0.1
SSBP4-209ENST00000601357 NAT8Q9UHE5 227 aa14.42□□□□□ -0.1
SSBP4-209ENST00000601357 LINC00959A0A1B0GUT2 108 aa14.41□□□□□ -0.1
SSBP4-209ENST00000601357 SMIM27A0A1W2PRY6 76 aa14.41□□□□□ -0.1
SSBP4-209ENST00000601357 SMKR1H3BMG3 65 aa14.41□□□□□ -0.1
SSBP4-209ENST00000601357 ADIRFQ15847 76 aa14.41□□□□□ -0.1
SSBP4-209ENST00000601357 HIGD2BQ4VC39 106 aa14.41□□□□□ -0.1
SSBP4-209ENST00000601357 CDC42SE2Q9NRR3 84 aa14.41□□□□□ -0.1
SSBP4-209ENST00000601357 CHTF8P0CG12 524 aa14.4□□□□□ -0.1
SSBP4-209ENST00000601357 HNRNPA3P51991 378 aaKnown RBP14.4□□□□□ -0.1
SSBP4-209ENST00000601357 SMDT1Q9H4I9 107 aa14.4□□□□□ -0.1
SSBP4-209ENST00000601357 C7orf77A4D0Y5 90 aa14.39□□□□□ -0.11
SSBP4-209ENST00000601357 VCYO14598 125 aa14.39□□□□□ -0.11
SSBP4-209ENST00000601357 PPP1R17O96001 155 aa14.39□□□□□ -0.11
SSBP4-209ENST00000601357 OXTP01178 125 aa14.39□□□□□ -0.11
SSBP4-209ENST00000601357 PEA15Q15121 130 aa14.39□□□□□ -0.11
SSBP4-209ENST00000601357 A0A087WYN8 130 aa14.38□□□□□ -0.11
SSBP4-209ENST00000601357 CCL25O15444 150 aa14.38□□□□□ -0.11
SSBP4-209ENST00000601357 XCL1P47992 114 aa14.38□□□□□ -0.11
SSBP4-209ENST00000601357 SUMO2P61956 95 aaKnown RBP14.38□□□□□ -0.11
SSBP4-209ENST00000601357 FAM104BQ5XKR9 115 aa14.38□□□□□ -0.11
SSBP4-209ENST00000601357 ZNF664Q8N3J9 261 aa14.37□□□□□ -0.11
SSBP4-209ENST00000601357 COX6A2Q02221 97 aa14.36□□□□□ -0.11
SSBP4-209ENST00000601357 MRPL51Q4U2R6 128 aaKnown RBP14.36□□□□□ -0.11
SSBP4-209ENST00000601357 PLAC8Q9NZF1 115 aa14.36□□□□□ -0.11
SSBP4-209ENST00000601357 CSDC2Q9Y534 153 aaKnown RBP14.35□□□□□ -0.11
SSBP4-209ENST00000601357 A0A1B0GW15 77 aa14.34□□□□□ -0.11
SSBP4-209ENST00000601357 PPP1R2P9O14990 202 aa14.34□□□□□ -0.11
SSBP4-209ENST00000601357 FCER1GP30273 86 aa14.34□□□□□ -0.11
SSBP4-209ENST00000601357 SS18Q15532 418 aa14.34□□□□□ -0.11
SSBP4-209ENST00000601357 CD164L2Q6UWJ8 174 aa14.34□□□□□ -0.11
SSBP4-209ENST00000601357 PRSS3P2Q8NHM4 247 aa14.34□□□□□ -0.11
SSBP4-209ENST00000601357 DPH3Q96FX2 82 aa14.34□□□□□ -0.11
SSBP4-209ENST00000601357 UBE2D4Q9Y2X8 147 aa14.34□□□□□ -0.11
SSBP4-209ENST00000601357 TRBV24-1A0A075B6N3 115 aa14.33□□□□□ -0.12
SSBP4-209ENST00000601357 IGHV1-58A0A0C4DH39 117 aa14.33□□□□□ -0.12
SSBP4-209ENST00000601357 LINC00862A6NCI5 91 aa14.33□□□□□ -0.12
SSBP4-209ENST00000601357 CAMPP49913 170 aa14.33□□□□□ -0.12
SSBP4-209ENST00000601357 KIR2DL4Q99706 377 aa14.33□□□□□ -0.12
SSBP4-209ENST00000601357 C20orf78Q9BR46 151 aa14.32□□□□□ -0.12
SSBP4-209ENST00000601357 RPL32P62910 135 aaKnown RBP14.31□□□□□ -0.12
SSBP4-209ENST00000601357 A0A1B0GXF2 115 aa14.3□□□□□ -0.12
SSBP4-209ENST00000601357 SMAGPQ0VAQ4 97 aa14.29□□□□□ -0.12
SSBP4-209ENST00000601357 LINC00526Q96FQ7 95 aa14.29□□□□□ -0.12
SSBP4-209ENST00000601357 TIMM21Q9BVV7 248 aa14.29□□□□□ -0.12
SSBP4-209ENST00000601357 C1orf196B1AJZ1 125 aa14.28□□□□□ -0.12
SSBP4-209ENST00000601357 CKS2P33552 79 aa14.28□□□□□ -0.12
SSBP4-209ENST00000601357 HBBP68871 147 aa14.28□□□□□ -0.12
SSBP4-209ENST00000601357 HMCN2Q8NDA2 5059 aa14.28□□□□□ -0.12
SSBP4-209ENST00000601357 A0A096LNI7 61 aa14.27□□□□□ -0.13
SSBP4-209ENST00000601357 IGKV2-24A0A0C4DH68 120 aa14.27□□□□□ -0.13
SSBP4-209ENST00000601357 TNFRSF6BO95407 300 aa14.27□□□□□ -0.13
SSBP4-209ENST00000601357 MAJINQ3KP22 176 aa14.27□□□□□ -0.13
SSBP4-209ENST00000601357 MRPL54Q6P161 138 aaKnown RBP14.27□□□□□ -0.13
SSBP4-209ENST00000601357 S100A8P05109 93 aa14.26□□□□□ -0.13
SSBP4-209ENST00000601357 RNASE13Q5GAN3 156 aaKnown RBP14.26□□□□□ -0.13
SSBP4-209ENST00000601357 CARD19Q96LW7 228 aa14.26□□□□□ -0.13
SSBP4-209ENST00000601357 D6R8Y8 96 aa14.25□□□□□ -0.13
SSBP4-209ENST00000601357 F8W036 122 aa14.25□□□□□ -0.13
SSBP4-209ENST00000601357 PHOX2AO14813 284 aa14.25□□□□□ -0.13
SSBP4-209ENST00000601357 TCAPO15273 167 aa14.25□□□□□ -0.13
SSBP4-209ENST00000601357 Q6ZRU5 148 aa14.25□□□□□ -0.13
SSBP4-209ENST00000601357 Q6ZUT4 128 aa14.25□□□□□ -0.13
SSBP4-209ENST00000601357 TMEM18Q96B42 140 aa14.25□□□□□ -0.13
SSBP4-209ENST00000601357 SMIM2Q9BVW6 85 aa14.25□□□□□ -0.13
SSBP4-209ENST00000601357 ZNF561-AS1K7EIQ3 104 aa14.24□□□□□ -0.13
SSBP4-209ENST00000601357 STPG4Q8N801 248 aa14.24□□□□□ -0.13
SSBP4-209ENST00000601357 FAM104AQ969W3 186 aa14.24□□□□□ -0.13
SSBP4-209ENST00000601357 COX7A2LO14548 114 aa14.23□□□□□ -0.13
SSBP4-209ENST00000601357 SYCNQ0VAF6 134 aa14.23□□□□□ -0.13
SSBP4-209ENST00000601357 SERTAD4-AS1Q5TG53 156 aa14.23□□□□□ -0.13
SSBP4-209ENST00000601357 C7orf33Q8WU49 177 aa14.23□□□□□ -0.13
SSBP4-209ENST00000601357 LINC00474Q9P2X8 69 aa14.23□□□□□ -0.13
SSBP4-209ENST00000601357 PKIGQ9Y2B9 76 aa14.23□□□□□ -0.13
SSBP4-209ENST00000601357 TRAV13-1A0A0B4J241 112 aa14.22□□□□□ -0.13
SSBP4-209ENST00000601357 NPYP01303 97 aa14.22□□□□□ -0.13
SSBP4-209ENST00000601357 PPBPP02775 128 aa14.22□□□□□ -0.13
SSBP4-209ENST00000601357 RPL39P62891 51 aaKnown RBP14.22□□□□□ -0.13
SSBP4-209ENST00000601357 IGLV4-69A0A075B6H9 119 aa14.21□□□□□ -0.13
SSBP4-209ENST00000601357 ATP5L2Q7Z4Y8 100 aa14.21□□□□□ -0.13
SSBP4-209ENST00000601357 MALP21145 153 aa14.2□□□□□ -0.14
SSBP4-209ENST00000601357 MT1HL1P0DM35 61 aa14.19□□□□□ -0.14
SSBP4-209ENST00000601357 SPANXA1Q9NS26 97 aa14.19□□□□□ -0.14
SSBP4-209ENST00000601357 PRR3P79522 188 aaKnown RBP14.17□□□□□ -0.14
SSBP4-209ENST00000601357 MRPS36P82909 103 aaKnown RBP14.17□□□□□ -0.14
SSBP4-209ENST00000601357 C5orf38Q86SI9 138 aa14.17□□□□□ -0.14
SSBP4-209ENST00000601357 ORMDL3Q8N138 153 aa14.17□□□□□ -0.14
SSBP4-209ENST00000601357 PNRC1Q12796 327 aaPredicted RBP14.16□□□□□ -0.14
SSBP4-209ENST00000601357 C2orf48Q96LS8 159 aa14.16□□□□□ -0.14
SSBP4-209ENST00000601357 PTTG1IPP53801 180 aa14.15□□□□□ -0.14
SSBP4-209ENST00000601357 OPRPNQ99935 248 aaPredicted RBP14.15□□□□□ -0.14
SSBP4-209ENST00000601357 LOC107984640A0A0U1RRK4 108 aa14.14□□□□□ -0.15
SSBP4-209ENST00000601357 TMEM136Q6ZRR5 245 aa14.14□□□□□ -0.15
SSBP4-209ENST00000601357 PRELID3AQ96N28 172 aa14.14□□□□□ -0.15
SSBP4-209ENST00000601357 CAMK2N2Q96S95 79 aa14.14□□□□□ -0.15
SSBP4-209ENST00000601357 IGHV3OR16-9A0A0B4J2B5 98 aa14.13□□□□□ -0.15
SSBP4-209ENST00000601357 PRSS47A8MTI9 375 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms