RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 ATP5L2Q7Z4Y8 100 aa9.23□□□□□ -0.93
LIG1-218ENST00000599322 FAM30AQ9NZY2 134 aa9.23□□□□□ -0.93
LIG1-218ENST00000599322 VPS13BQ7Z7G8 4022 aa9.22□□□□□ -0.93
LIG1-218ENST00000599322 GAS8-AS1O95177 125 aa9.22□□□□□ -0.93
LIG1-218ENST00000599322 PLA2G1BP04054 148 aaKnown RBP9.22□□□□□ -0.93
LIG1-218ENST00000599322 HAMPP81172 84 aa9.22□□□□□ -0.93
LIG1-218ENST00000599322 CHCHD10Q8WYQ3 142 aaPredicted RBP9.22□□□□□ -0.93
LIG1-218ENST00000599322 KRTAP26-1Q6PEX3 210 aa9.21□□□□□ -0.94
LIG1-218ENST00000599322 Q6ZSA8 131 aa9.21□□□□□ -0.94
LIG1-218ENST00000599322 MRPL52Q86TS9 123 aaKnown RBP9.21□□□□□ -0.94
LIG1-218ENST00000599322 NRACQ8N912 160 aa9.21□□□□□ -0.94
LIG1-218ENST00000599322 CHAC1Q9BUX1 264 aa9.21□□□□□ -0.94
LIG1-218ENST00000599322 TNFRSF6BO95407 300 aa9.2□□□□□ -0.94
LIG1-218ENST00000599322 UQCC3Q6UW78 93 aa9.2□□□□□ -0.94
LIG1-218ENST00000599322 ZNF664Q8N3J9 261 aa9.2□□□□□ -0.94
LIG1-218ENST00000599322 C9orf163Q8N9P6 203 aa9.2□□□□□ -0.94
LIG1-218ENST00000599322 DPH3Q96FX2 82 aa9.2□□□□□ -0.94
LIG1-218ENST00000599322 TRBV24-1A0A075B6N3 115 aa9.19□□□□□ -0.94
LIG1-218ENST00000599322 D6R8Y8 96 aa9.19□□□□□ -0.94
LIG1-218ENST00000599322 PHOX2AO14813 284 aa9.19□□□□□ -0.94
LIG1-218ENST00000599322 CCL25O15444 150 aa9.19□□□□□ -0.94
LIG1-218ENST00000599322 RAB5AP20339 215 aa9.19□□□□□ -0.94
LIG1-218ENST00000599322 RPL32P62910 135 aaKnown RBP9.19□□□□□ -0.94
LIG1-218ENST00000599322 TMEM136Q6ZRR5 245 aa9.19□□□□□ -0.94
LIG1-218ENST00000599322 ORMDL3Q8N138 153 aa9.19□□□□□ -0.94
LIG1-218ENST00000599322 IGHV3-64A0A075B6Q5 118 aa9.18□□□□□ -0.94
LIG1-218ENST00000599322 LINC00959A0A1B0GUT2 108 aa9.18□□□□□ -0.94
LIG1-218ENST00000599322 A0A1B0GXF2 115 aa9.18□□□□□ -0.94
LIG1-218ENST00000599322 XCL1P47992 114 aa9.18□□□□□ -0.94
LIG1-218ENST00000599322 CNBPP62633 177 aaKnown RBP9.18□□□□□ -0.94
LIG1-218ENST00000599322 SCXQ7RTU7 201 aa9.18□□□□□ -0.94
LIG1-218ENST00000599322 CDC42SE2Q9NRR3 84 aa9.18□□□□□ -0.94
LIG1-218ENST00000599322 PKIGQ9Y2B9 76 aa9.18□□□□□ -0.94
LIG1-218ENST00000599322 CSDC2Q9Y534 153 aaKnown RBP9.18□□□□□ -0.94
LIG1-218ENST00000599322 MYCBP2O75592 4640 aa9.17□□□□□ -0.94
LIG1-218ENST00000599322 C1orf196B1AJZ1 125 aa9.17□□□□□ -0.94
LIG1-218ENST00000599322 LINC00528Q8N1L1 170 aa9.17□□□□□ -0.94
LIG1-218ENST00000599322 SMIM2Q9BVW6 85 aa9.17□□□□□ -0.94
LIG1-218ENST00000599322 DNAH8Q96JB1 4490 aa9.17□□□□□ -0.94
LIG1-218ENST00000599322 MALP21145 153 aa9.16□□□□□ -0.94
LIG1-218ENST00000599322 PRELID3AQ96N28 172 aa9.16□□□□□ -0.94
LIG1-218ENST00000599322 TIMM21Q9BVV7 248 aa9.16□□□□□ -0.94
LIG1-218ENST00000599322 DMBT1Q9UGM3 2413 aaPredicted RBP9.15□□□□□ -0.94
LIG1-218ENST00000599322 IGHV1-58A0A0C4DH39 117 aa9.15□□□□□ -0.94
LIG1-218ENST00000599322 CD164L2Q6UWJ8 174 aa9.15□□□□□ -0.94
LIG1-218ENST00000599322 CIRBP-AS1Q8TBR5 109 aa9.15□□□□□ -0.94
LIG1-218ENST00000599322 CTDSP1Q9GZU7 261 aa9.15□□□□□ -0.94
LIG1-218ENST00000599322 LAMTOR2Q9Y2Q5 125 aa9.15□□□□□ -0.94
LIG1-218ENST00000599322 ZNF561-AS1K7EIQ3 104 aa9.14□□□□□ -0.95
LIG1-218ENST00000599322 NPYP01303 97 aa9.14□□□□□ -0.95
LIG1-218ENST00000599322 S100PP25815 95 aa9.14□□□□□ -0.95
LIG1-218ENST00000599322 HIGD2BQ4VC39 106 aa9.14□□□□□ -0.95
LIG1-218ENST00000599322 IMMP2LQ96T52 175 aa9.14□□□□□ -0.95
LIG1-218ENST00000599322 MAP1LC3AQ9H492 121 aa9.14□□□□□ -0.95
LIG1-218ENST00000599322 UBE2D4Q9Y2X8 147 aa9.14□□□□□ -0.95
LIG1-218ENST00000599322 TMEM218A2RU14 115 aa9.13□□□□□ -0.95
LIG1-218ENST00000599322 FOXI1Q12951 378 aa9.13□□□□□ -0.95
LIG1-218ENST00000599322 NDUFA5Q16718 116 aa9.13□□□□□ -0.95
LIG1-218ENST00000599322 C15orf56Q8N910 161 aa9.13□□□□□ -0.95
LIG1-218ENST00000599322 SPANXA1Q9NS26 97 aa9.13□□□□□ -0.95
LIG1-218ENST00000599322 FLG2Q5D862 2391 aaPredicted RBP9.13□□□□□ -0.95
LIG1-218ENST00000599322 GVQW2A0A096LPI5 108 aaPredicted RBP9.12□□□□□ -0.95
LIG1-218ENST00000599322 TRAV13-1A0A0B4J241 112 aa9.12□□□□□ -0.95
LIG1-218ENST00000599322 COX7A2LO14548 114 aa9.12□□□□□ -0.95
LIG1-218ENST00000599322 APOMO95445 188 aa9.12□□□□□ -0.95
LIG1-218ENST00000599322 IFITM2Q01629 132 aa9.12□□□□□ -0.95
LIG1-218ENST00000599322 SDIM1Q6ZPB5 146 aa9.12□□□□□ -0.95
LIG1-218ENST00000599322 LOC389332A0A1B0GUA5 103 aa9.11□□□□□ -0.95
LIG1-218ENST00000599322 G0S2P27469 103 aa9.11□□□□□ -0.95
LIG1-218ENST00000599322 IFI27P40305 119 aaPredicted RBP9.11□□□□□ -0.95
LIG1-218ENST00000599322 SEC11CQ9BY50 192 aa9.11□□□□□ -0.95
LIG1-218ENST00000599322 SRRM2Q9UQ35 2752 aaKnown RBP9.11□□□□□ -0.95
LIG1-218ENST00000599322 TRAV9-1A0A075B6T8 112 aa9.1□□□□□ -0.95
LIG1-218ENST00000599322 COMMD7Q86VX2 200 aa9.1□□□□□ -0.95
LIG1-218ENST00000599322 RPL39P62891 51 aaKnown RBP9.09□□□□□ -0.95
LIG1-218ENST00000599322 RNASE13Q5GAN3 156 aaKnown RBP9.09□□□□□ -0.95
LIG1-218ENST00000599322 Q6ZUT4 128 aa9.09□□□□□ -0.95
LIG1-218ENST00000599322 IFITM10A6NMD0 228 aa9.08□□□□□ -0.96
LIG1-218ENST00000599322 K7EMI3 77 aa9.08□□□□□ -0.96
LIG1-218ENST00000599322 MRPS36P82909 103 aaKnown RBP9.08□□□□□ -0.96
LIG1-218ENST00000599322 ORMDL2Q53FV1 153 aa9.08□□□□□ -0.96
LIG1-218ENST00000599322 Q6ZN92 141 aa9.08□□□□□ -0.96
LIG1-218ENST00000599322 Q8N8P6 123 aa9.08□□□□□ -0.96
LIG1-218ENST00000599322 CARD19Q96LW7 228 aa9.08□□□□□ -0.96
LIG1-218ENST00000599322 LINC00474Q9P2X8 69 aa9.08□□□□□ -0.96
LIG1-218ENST00000599322 PRSS47A8MTI9 375 aa9.07□□□□□ -0.96
LIG1-218ENST00000599322 SLPIP03973 132 aa9.07□□□□□ -0.96
LIG1-218ENST00000599322 RPL37AP61513 92 aaKnown RBP9.07□□□□□ -0.96
LIG1-218ENST00000599322 COX6A2Q02221 97 aa9.07□□□□□ -0.96
LIG1-218ENST00000599322 SYCNQ0VAF6 134 aa9.07□□□□□ -0.96
LIG1-218ENST00000599322 COX19Q49B96 90 aa9.07□□□□□ -0.96
LIG1-218ENST00000599322 NXT2Q9NPJ8 142 aaKnown RBP9.07□□□□□ -0.96
LIG1-218ENST00000599322 CYSLTR1Q9Y271 337 aa9.07□□□□□ -0.96
LIG1-218ENST00000599322 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.07□□□□□ -0.96
LIG1-218ENST00000599322 C5orf38Q86SI9 138 aa9.06□□□□□ -0.96
LIG1-218ENST00000599322 C2orf88Q9BSF0 95 aa9.06□□□□□ -0.96
LIG1-218ENST00000599322 PYGO1Q9Y3Y4 419 aa9.06□□□□□ -0.96
LIG1-218ENST00000599322 TGIF2-C20orf24A0A0A6YYL0 155 aa9.05□□□□□ -0.96
LIG1-218ENST00000599322 IGKV2-24A0A0C4DH68 120 aa9.05□□□□□ -0.96
LIG1-218ENST00000599322 ADCYAP1P18509 176 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms