RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 BORCS7Q96B45 105 aa6.56□□□□□ -1.36
CHMP2A-202ENST00000596708 MRAP2Q96G30 205 aa6.56□□□□□ -1.36
CHMP2A-202ENST00000596708 ST20Q9HBF5 79 aa6.56□□□□□ -1.36
CHMP2A-202ENST00000596708 TMEM242Q9NWH2 141 aa6.56□□□□□ -1.36
CHMP2A-202ENST00000596708 TRBV6-5A0A0K0K1A5 114 aa6.55□□□□□ -1.36
CHMP2A-202ENST00000596708 A8MWL6 223 aa6.55□□□□□ -1.36
CHMP2A-202ENST00000596708 ESDP10768 282 aa6.55□□□□□ -1.36
CHMP2A-202ENST00000596708 SRSF9Q13242 221 aaKnown RBP eCLIP6.55□□□□□ -1.36
CHMP2A-202ENST00000596708 CD164L2Q6UWJ8 174 aa6.55□□□□□ -1.36
CHMP2A-202ENST00000596708 ISOC2Q96AB3 205 aa6.55□□□□□ -1.36
CHMP2A-202ENST00000596708 CDC42SE2Q9NRR3 84 aa6.55□□□□□ -1.36
CHMP2A-202ENST00000596708 LOC107984640A0A0U1RRK4 108 aa6.54□□□□□ -1.36
CHMP2A-202ENST00000596708 GAS8-AS1O95177 125 aa6.54□□□□□ -1.36
CHMP2A-202ENST00000596708 TSHBP01222 138 aa6.54□□□□□ -1.36
CHMP2A-202ENST00000596708 MALP21145 153 aa6.54□□□□□ -1.36
CHMP2A-202ENST00000596708 CAMPP49913 170 aa6.54□□□□□ -1.36
CHMP2A-202ENST00000596708 PTTG1IPP53801 180 aa6.54□□□□□ -1.36
CHMP2A-202ENST00000596708 SLC51BQ86UW2 128 aa6.54□□□□□ -1.36
CHMP2A-202ENST00000596708 ZNF664Q8N3J9 261 aa6.54□□□□□ -1.36
CHMP2A-202ENST00000596708 IGLV4-69A0A075B6H9 119 aa6.53□□□□□ -1.36
CHMP2A-202ENST00000596708 C7orf77A4D0Y5 90 aa6.53□□□□□ -1.36
CHMP2A-202ENST00000596708 CEBPGP53567 150 aa6.53□□□□□ -1.36
CHMP2A-202ENST00000596708 FAM231DQ6ZW35 169 aa6.53□□□□□ -1.36
CHMP2A-202ENST00000596708 FAM210AQ96ND0 272 aa6.53□□□□□ -1.36
CHMP2A-202ENST00000596708 POLR2KP53803 58 aaKnown RBP6.52□□□□□ -1.37
CHMP2A-202ENST00000596708 MRPL52Q86TS9 123 aaKnown RBP6.52□□□□□ -1.37
CHMP2A-202ENST00000596708 CAMK2N2Q96S95 79 aa6.52□□□□□ -1.37
CHMP2A-202ENST00000596708 RNF213Q63HN8 5207 aa6.52□□□□□ -1.37
CHMP2A-202ENST00000596708 A0A1B0GUT8 65 aa6.51□□□□□ -1.37
CHMP2A-202ENST00000596708 A0A1W2PNN7 141 aa6.51□□□□□ -1.37
CHMP2A-202ENST00000596708 C1orf196B1AJZ1 125 aa6.51□□□□□ -1.37
CHMP2A-202ENST00000596708 TMEM250H0YL14 139 aa6.51□□□□□ -1.37
CHMP2A-202ENST00000596708 COX7A2LO14548 114 aa6.51□□□□□ -1.37
CHMP2A-202ENST00000596708 RAB4AP20338 218 aa6.51□□□□□ -1.37
CHMP2A-202ENST00000596708 FCER1GP30273 86 aa6.51□□□□□ -1.37
CHMP2A-202ENST00000596708 NUP35Q8NFH5 326 aa6.51□□□□□ -1.37
CHMP2A-202ENST00000596708 TMEM191AQ9H0A3 160 aa6.51□□□□□ -1.37
CHMP2A-202ENST00000596708 TRAV13-1A0A0B4J241 112 aa6.5□□□□□ -1.37
CHMP2A-202ENST00000596708 TRBV27A0A0K0K1C4 114 aa6.5□□□□□ -1.37
CHMP2A-202ENST00000596708 HIGD1CA8MV81 97 aa6.5□□□□□ -1.37
CHMP2A-202ENST00000596708 VCYO14598 125 aa6.5□□□□□ -1.37
CHMP2A-202ENST00000596708 MT-ND6P03923 174 aa6.5□□□□□ -1.37
CHMP2A-202ENST00000596708 RPL18AQ02543 176 aaKnown RBP6.5□□□□□ -1.37
CHMP2A-202ENST00000596708 SMAGPQ0VAQ4 97 aa6.5□□□□□ -1.37
CHMP2A-202ENST00000596708 C9orf116Q5BN46 136 aaPredicted RBP6.5□□□□□ -1.37
CHMP2A-202ENST00000596708 RNASE13Q5GAN3 156 aaKnown RBP6.5□□□□□ -1.37
CHMP2A-202ENST00000596708 CT83Q5H943 113 aa6.5□□□□□ -1.37
CHMP2A-202ENST00000596708 C5orf38Q86SI9 138 aa6.5□□□□□ -1.37
CHMP2A-202ENST00000596708 AMN1Q8IY45 258 aa6.5□□□□□ -1.37
CHMP2A-202ENST00000596708 PSORS1C2Q9UIG4 136 aa6.5□□□□□ -1.37
CHMP2A-202ENST00000596708 SMKR1H3BMG3 65 aa6.49□□□□□ -1.37
CHMP2A-202ENST00000596708 APOMO95445 188 aa6.49□□□□□ -1.37
CHMP2A-202ENST00000596708 BLOC1S1P78537 153 aa6.49□□□□□ -1.37
CHMP2A-202ENST00000596708 C1orf137Q5JT78 98 aa6.49□□□□□ -1.37
CHMP2A-202ENST00000596708 LCE2DQ5TA82 110 aaPredicted RBP6.49□□□□□ -1.37
CHMP2A-202ENST00000596708 TSKUQ8WUA8 353 aa6.49□□□□□ -1.37
CHMP2A-202ENST00000596708 C2orf48Q96LS8 159 aa6.49□□□□□ -1.37
CHMP2A-202ENST00000596708 OPRPNQ99935 248 aaPredicted RBP6.49□□□□□ -1.37
CHMP2A-202ENST00000596708 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.48□□□□□ -1.37
CHMP2A-202ENST00000596708 PHF5AQ7RTV0 110 aaKnown RBP6.48□□□□□ -1.37
CHMP2A-202ENST00000596708 TCTE3Q8IZS6 198 aa6.48□□□□□ -1.37
CHMP2A-202ENST00000596708 TMEM18Q96B42 140 aa6.48□□□□□ -1.37
CHMP2A-202ENST00000596708 KIR2DL4Q99706 377 aa6.48□□□□□ -1.37
CHMP2A-202ENST00000596708 UBE2D4Q9Y2X8 147 aa6.48□□□□□ -1.37
CHMP2A-202ENST00000596708 PPP1R17O96001 155 aa6.47□□□□□ -1.37
CHMP2A-202ENST00000596708 SUMO2P61956 95 aaKnown RBP6.47□□□□□ -1.37
CHMP2A-202ENST00000596708 SPAG11BQ08648 103 aa6.47□□□□□ -1.37
CHMP2A-202ENST00000596708 RIGQ13278 110 aa6.47□□□□□ -1.37
CHMP2A-202ENST00000596708 ALKAL2Q6UX46 152 aa6.47□□□□□ -1.37
CHMP2A-202ENST00000596708 SMIM7Q9BQ49 75 aa6.47□□□□□ -1.37
CHMP2A-202ENST00000596708 EIF5A2Q9GZV4 153 aaKnown RBP6.47□□□□□ -1.37
CHMP2A-202ENST00000596708 OSTCQ9NRP0 149 aa6.47□□□□□ -1.37
CHMP2A-202ENST00000596708 CSDC2Q9Y534 153 aaKnown RBP6.47□□□□□ -1.37
CHMP2A-202ENST00000596708 ZNF727A8MUV8 499 aa6.46□□□□□ -1.38
CHMP2A-202ENST00000596708 Q6ZUT4 128 aa6.46□□□□□ -1.38
CHMP2A-202ENST00000596708 LINC01551Q86U37 167 aa6.46□□□□□ -1.38
CHMP2A-202ENST00000596708 PPP1R2P9O14990 202 aa6.45□□□□□ -1.38
CHMP2A-202ENST00000596708 RNF151Q2KHN1 245 aa6.45□□□□□ -1.38
CHMP2A-202ENST00000596708 NRACQ8N912 160 aa6.45□□□□□ -1.38
CHMP2A-202ENST00000596708 LPAP08519 4548 aa6.45□□□□□ -1.38
CHMP2A-202ENST00000596708 A0A087WZ39 114 aa6.44□□□□□ -1.38
CHMP2A-202ENST00000596708 IGLV7-43P04211 117 aa6.44□□□□□ -1.38
CHMP2A-202ENST00000596708 PRR26Q8N8Z3 221 aa6.44□□□□□ -1.38
CHMP2A-202ENST00000596708 OR10D4PQ8NGN7 298 aa6.44□□□□□ -1.38
CHMP2A-202ENST00000596708 ORAOV1Q8WV07 137 aa6.44□□□□□ -1.38
CHMP2A-202ENST00000596708 DIRC1Q969H9 104 aa6.44□□□□□ -1.38
CHMP2A-202ENST00000596708 IMMP2LQ96T52 175 aa6.44□□□□□ -1.38
CHMP2A-202ENST00000596708 TIMM21Q9BVV7 248 aa6.44□□□□□ -1.38
CHMP2A-202ENST00000596708 V9GYV3 84 aa6.44□□□□□ -1.38
CHMP2A-202ENST00000596708 NDUFA1O15239 70 aa6.43□□□□□ -1.38
CHMP2A-202ENST00000596708 MRPL51Q4U2R6 128 aaKnown RBP6.43□□□□□ -1.38
CHMP2A-202ENST00000596708 MRPL35Q9NZE8 188 aaKnown RBP6.43□□□□□ -1.38
CHMP2A-202ENST00000596708 NAT8BQ9UHF3 227 aa6.43□□□□□ -1.38
CHMP2A-202ENST00000596708 FAM168BA1KXE4 195 aa6.42□□□□□ -1.38
CHMP2A-202ENST00000596708 LINC00862A6NCI5 91 aa6.42□□□□□ -1.38
CHMP2A-202ENST00000596708 F8WDY8 70 aa6.42□□□□□ -1.38
CHMP2A-202ENST00000596708 SRP19P09132 144 aaKnown RBP6.42□□□□□ -1.38
CHMP2A-202ENST00000596708 CKS2P33552 79 aa6.42□□□□□ -1.38
CHMP2A-202ENST00000596708 RPL39P62891 51 aaKnown RBP6.42□□□□□ -1.38
CHMP2A-202ENST00000596708 TMEM241Q24JQ0 296 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms