RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 CCL24O00175 119 aa12.5□□□□□ -0.41
SHKBP1-205ENST00000594973 NXPH4O95158 308 aa12.5□□□□□ -0.41
SHKBP1-205ENST00000594973 TSHBP01222 138 aa12.5□□□□□ -0.41
SHKBP1-205ENST00000594973 DNAJC30Q96LL9 226 aa12.5□□□□□ -0.41
SHKBP1-205ENST00000594973 M0R2P5 195 aa12.49□□□□□ -0.41
SHKBP1-205ENST00000594973 TIMM17AQ99595 171 aa12.49□□□□□ -0.41
SHKBP1-205ENST00000594973 IMUPQ9GZP8 106 aa12.49□□□□□ -0.41
SHKBP1-205ENST00000594973 RBMY1A1P0DJD3 496 aaKnown RBP12.49□□□□□ -0.41
SHKBP1-205ENST00000594973 RBMY1CP0DJD4 496 aa12.49□□□□□ -0.41
SHKBP1-205ENST00000594973 RBMY1FQ15415 496 aaKnown RBP12.49□□□□□ -0.41
SHKBP1-205ENST00000594973 FAM74A4Q5TZK3 123 aa12.49□□□□□ -0.41
SHKBP1-205ENST00000594973 MAP6D1Q9H9H5 199 aa12.49□□□□□ -0.41
SHKBP1-205ENST00000594973 TMEM170BQ5T4T1 132 aa12.48□□□□□ -0.41
SHKBP1-205ENST00000594973 C2orf82Q6UX34 121 aa12.48□□□□□ -0.41
SHKBP1-205ENST00000594973 CHCHD5Q9BSY4 110 aa12.48□□□□□ -0.41
SHKBP1-205ENST00000594973 KIF25-AS1Q9Y6Z4 181 aa12.48□□□□□ -0.41
SHKBP1-205ENST00000594973 RBMY1BA6NDE4 496 aaKnown RBP12.48□□□□□ -0.41
SHKBP1-205ENST00000594973 RBMY1EA6NEQ0 496 aaKnown RBP12.48□□□□□ -0.41
SHKBP1-205ENST00000594973 F5H697 171 aa12.48□□□□□ -0.41
SHKBP1-205ENST00000594973 RBMY1DP0C7P1 496 aaKnown RBP12.48□□□□□ -0.41
SHKBP1-205ENST00000594973 Q1RN00 199 aa12.48□□□□□ -0.41
SHKBP1-205ENST00000594973 POM121L12Q8N7R1 296 aa12.48□□□□□ -0.41
SHKBP1-205ENST00000594973 C9orf85Q96MD7 179 aa12.48□□□□□ -0.41
SHKBP1-205ENST00000594973 LEPROTO15243 131 aa12.47□□□□□ -0.41
SHKBP1-205ENST00000594973 LINC00315P59091 139 aa12.47□□□□□ -0.41
SHKBP1-205ENST00000594973 ZNF876PQ49A33 203 aa12.47□□□□□ -0.41
SHKBP1-205ENST00000594973 TMEM101Q96IK0 257 aa12.47□□□□□ -0.41
SHKBP1-205ENST00000594973 PRM2P04554 102 aa12.46□□□□□ -0.41
SHKBP1-205ENST00000594973 ZNF56Q15929 161 aa12.46□□□□□ -0.41
SHKBP1-205ENST00000594973 MUSTN1Q8IVN3 82 aa12.46□□□□□ -0.41
SHKBP1-205ENST00000594973 TP53TG1Q9Y2A0 90 aa12.46□□□□□ -0.41
SHKBP1-205ENST00000594973 H7C2G1 150 aa12.46□□□□□ -0.41
SHKBP1-205ENST00000594973 HILS1P60008 231 aa12.46□□□□□ -0.41
SHKBP1-205ENST00000594973 DEFB104AQ8WTQ1 72 aa12.46□□□□□ -0.41
SHKBP1-205ENST00000594973 C16orf95Q9H693 158 aa12.46□□□□□ -0.41
SHKBP1-205ENST00000594973 JMJD1CQ15652 2540 aa12.46□□□□□ -0.42
SHKBP1-205ENST00000594973 ZNF256Q9Y2P7 627 aaPredicted RBP12.45□□□□□ -0.42
SHKBP1-205ENST00000594973 EMP1P54849 157 aa12.45□□□□□ -0.42
SHKBP1-205ENST00000594973 C5orf47Q569G3 176 aa12.45□□□□□ -0.42
SHKBP1-205ENST00000594973 SUMO4Q6EEV6 95 aa12.45□□□□□ -0.42
SHKBP1-205ENST00000594973 ZNRF2Q8NHG8 242 aa12.45□□□□□ -0.42
SHKBP1-205ENST00000594973 H7C423 109 aa12.44□□□□□ -0.42
SHKBP1-205ENST00000594973 TRIAP1O43715 76 aa12.44□□□□□ -0.42
SHKBP1-205ENST00000594973 CSDC2Q9Y534 153 aaKnown RBP12.44□□□□□ -0.42
SHKBP1-205ENST00000594973 SDHAF1A6NFY7 115 aa12.44□□□□□ -0.42
SHKBP1-205ENST00000594973 SPANXCQ9NY87 97 aa12.44□□□□□ -0.42
SHKBP1-205ENST00000594973 TRGV11A0A075B6L2 103 aa12.43□□□□□ -0.42
SHKBP1-205ENST00000594973 LY6G6DO95868 133 aa12.43□□□□□ -0.42
SHKBP1-205ENST00000594973 ACYP1P07311 99 aa12.43□□□□□ -0.42
SHKBP1-205ENST00000594973 TMEM223A0PJW6 202 aa12.42□□□□□ -0.42
SHKBP1-205ENST00000594973 COX6CP09669 75 aa12.42□□□□□ -0.42
SHKBP1-205ENST00000594973 ODF3L2Q3SX64 289 aa12.42□□□□□ -0.42
SHKBP1-205ENST00000594973 POLR2KP53803 58 aaKnown RBP12.42□□□□□ -0.42
SHKBP1-205ENST00000594973 NSUN5P1Q3KNT7 163 aa12.42□□□□□ -0.42
SHKBP1-205ENST00000594973 C3orf22Q8N5N4 141 aa12.42□□□□□ -0.42
SHKBP1-205ENST00000594973 A8MTW9 85 aa12.41□□□□□ -0.42
SHKBP1-205ENST00000594973 ATP5G1P05496 136 aa12.41□□□□□ -0.42
SHKBP1-205ENST00000594973 VCYO14598 125 aa12.4□□□□□ -0.42
SHKBP1-205ENST00000594973 NDUFA7O95182 113 aa12.4□□□□□ -0.42
SHKBP1-205ENST00000594973 UQCRQO14949 82 aa12.4□□□□□ -0.42
SHKBP1-205ENST00000594973 LINC00694P0DN24 101 aa12.4□□□□□ -0.42
SHKBP1-205ENST00000594973 ICOSQ9Y6W8 199 aa12.4□□□□□ -0.42
SHKBP1-205ENST00000594973 NOTCH3Q9UM47 2321 aa12.4□□□□□ -0.43
SHKBP1-205ENST00000594973 NSD1Q96L73 2696 aaPredicted RBP12.39□□□□□ -0.43
SHKBP1-205ENST00000594973 A0A1B0GX51 115 aa12.39□□□□□ -0.43
SHKBP1-205ENST00000594973 C9orf153Q5TBE3 101 aa12.39□□□□□ -0.43
SHKBP1-205ENST00000594973 TRAV25A0A0B4J276 109 aa12.38□□□□□ -0.43
SHKBP1-205ENST00000594973 FAM236AA0A1B0GUQ0 79 aa12.38□□□□□ -0.43
SHKBP1-205ENST00000594973 FAM236BA0A1B0GV22 79 aa12.38□□□□□ -0.43
SHKBP1-205ENST00000594973 XCL2Q9UBD3 114 aa12.38□□□□□ -0.43
SHKBP1-205ENST00000594973 IGHV3-73A0A0B4J1V6 119 aa12.38□□□□□ -0.43
SHKBP1-205ENST00000594973 RPL39P62891 51 aaKnown RBP12.38□□□□□ -0.43
SHKBP1-205ENST00000594973 STHQ8IWL8 128 aa12.38□□□□□ -0.43
SHKBP1-205ENST00000594973 LINC00526Q96FQ7 95 aa12.38□□□□□ -0.43
SHKBP1-205ENST00000594973 LST1O00453 97 aa12.37□□□□□ -0.43
SHKBP1-205ENST00000594973 PROK1P58294 105 aa12.37□□□□□ -0.43
SHKBP1-205ENST00000594973 C3orf56Q8N813 242 aa12.37□□□□□ -0.43
SHKBP1-205ENST00000594973 SPXQ9BT56 116 aa12.37□□□□□ -0.43
SHKBP1-205ENST00000594973 HIVEP1P15822 2718 aa12.36□□□□□ -0.43
SHKBP1-205ENST00000594973 A0A0J9YXY3 114 aa12.36□□□□□ -0.43
SHKBP1-205ENST00000594973 J3KT08 172 aa12.36□□□□□ -0.43
SHKBP1-205ENST00000594973 M0QY20 66 aa12.36□□□□□ -0.43
SHKBP1-205ENST00000594973 INSP01308 110 aa12.36□□□□□ -0.43
SHKBP1-205ENST00000594973 IGHV3OR16-12A0A075B7B8 117 aa12.36□□□□□ -0.43
SHKBP1-205ENST00000594973 ADARB2-AS1A8MUL3 147 aa12.36□□□□□ -0.43
SHKBP1-205ENST00000594973 INAFM1C9JVW0 142 aa12.36□□□□□ -0.43
SHKBP1-205ENST00000594973 TRBV27A0A0K0K1C4 114 aa12.34□□□□□ -0.43
SHKBP1-205ENST00000594973 ZNF22P17026 224 aaPredicted RBP12.34□□□□□ -0.43
SHKBP1-205ENST00000594973 RPS28P62857 69 aaKnown RBP12.34□□□□□ -0.43
SHKBP1-205ENST00000594973 FN1P02751 2386 aaKnown RBP12.34□□□□□ -0.43
SHKBP1-205ENST00000594973 C2CD3Q4AC94 2353 aa12.34□□□□□ -0.43
SHKBP1-205ENST00000594973 SMIM9A6NGZ8 99 aa12.34□□□□□ -0.43
SHKBP1-205ENST00000594973 LINC00643Q86TS7 51 aa12.34□□□□□ -0.43
SHKBP1-205ENST00000594973 TRBV6-5A0A0K0K1A5 114 aa12.33□□□□□ -0.44
SHKBP1-205ENST00000594973 HERVK_113P63121 156 aa12.33□□□□□ -0.44
SHKBP1-205ENST00000594973 ZNF415Q09FC8 603 aa12.33□□□□□ -0.44
SHKBP1-205ENST00000594973 LITAFQ99732 161 aa12.33□□□□□ -0.44
SHKBP1-205ENST00000594973 VWFP04275 2813 aa12.33□□□□□ -0.44
SHKBP1-205ENST00000594973 WIPF1O43516 503 aa12.33□□□□□ -0.44
SHKBP1-205ENST00000594973 WFDC10AQ9H1F0 79 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms