RNA–Protein interactions for RNA: ENST00000593251.5

RETREG3-212, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-212ENST00000593251 ZNF561-AS1K7EIQ3 104 aa10.79□□□□□ -0.68
RETREG3-212ENST00000593251 TSHBP01222 138 aa10.79□□□□□ -0.68
RETREG3-212ENST00000593251 ESDP10768 282 aa10.79□□□□□ -0.68
RETREG3-212ENST00000593251 SS18Q15532 418 aa10.79□□□□□ -0.68
RETREG3-212ENST00000593251 PTTG1IPP53801 180 aa10.78□□□□□ -0.68
RETREG3-212ENST00000593251 GAGE2BQ13066 116 aa10.78□□□□□ -0.68
RETREG3-212ENST00000593251 TRBV6-5A0A0K0K1A5 114 aa10.77□□□□□ -0.69
RETREG3-212ENST00000593251 GATCO43716 136 aaKnown RBP10.77□□□□□ -0.69
RETREG3-212ENST00000593251 CAMPP49913 170 aa10.77□□□□□ -0.69
RETREG3-212ENST00000593251 CD164L2Q6UWJ8 174 aa10.77□□□□□ -0.69
RETREG3-212ENST00000593251 MRAP2Q96G30 205 aa10.77□□□□□ -0.69
RETREG3-212ENST00000593251 ST20Q9HBF5 79 aa10.77□□□□□ -0.69
RETREG3-212ENST00000593251 CDC42SE2Q9NRR3 84 aa10.77□□□□□ -0.69
RETREG3-212ENST00000593251 LPAP08519 4548 aa10.77□□□□□ -0.69
RETREG3-212ENST00000593251 IGLV4-69A0A075B6H9 119 aa10.76□□□□□ -0.69
RETREG3-212ENST00000593251 A8MWL6 223 aa10.76□□□□□ -0.69
RETREG3-212ENST00000593251 LOC107984640A0A0U1RRK4 108 aa10.75□□□□□ -0.69
RETREG3-212ENST00000593251 A0A1W2PNN7 141 aa10.75□□□□□ -0.69
RETREG3-212ENST00000593251 SLC51BQ86UW2 128 aa10.75□□□□□ -0.69
RETREG3-212ENST00000593251 ZNF664Q8N3J9 261 aa10.75□□□□□ -0.69
RETREG3-212ENST00000593251 FAM210AQ96ND0 272 aa10.75□□□□□ -0.69
RETREG3-212ENST00000593251 MRPL52Q86TS9 123 aaKnown RBP10.74□□□□□ -0.69
RETREG3-212ENST00000593251 BORCS7Q96B45 105 aa10.74□□□□□ -0.69
RETREG3-212ENST00000593251 POLR2KP53803 58 aaKnown RBP10.73□□□□□ -0.69
RETREG3-212ENST00000593251 C7orf77A4D0Y5 90 aa10.72□□□□□ -0.69
RETREG3-212ENST00000593251 MALP21145 153 aa10.72□□□□□ -0.69
RETREG3-212ENST00000593251 RNASE13Q5GAN3 156 aaKnown RBP10.72□□□□□ -0.69
RETREG3-212ENST00000593251 FAM231DQ6ZW35 169 aa10.72□□□□□ -0.69
RETREG3-212ENST00000593251 NUP35Q8NFH5 326 aa10.72□□□□□ -0.69
RETREG3-212ENST00000593251 ISOC2Q96AB3 205 aa10.72□□□□□ -0.69
RETREG3-212ENST00000593251 PSORS1C2Q9UIG4 136 aa10.72□□□□□ -0.69
RETREG3-212ENST00000593251 TMEM250H0YL14 139 aa10.71□□□□□ -0.69
RETREG3-212ENST00000593251 COX7A2LO14548 114 aa10.71□□□□□ -0.69
RETREG3-212ENST00000593251 CAMK2N2Q96S95 79 aa10.71□□□□□ -0.69
RETREG3-212ENST00000593251 TRBV27A0A0K0K1C4 114 aa10.7□□□□□ -0.7
RETREG3-212ENST00000593251 MT-ND6P03923 174 aa10.7□□□□□ -0.7
RETREG3-212ENST00000593251 RPL18AQ02543 176 aaKnown RBP10.7□□□□□ -0.7
RETREG3-212ENST00000593251 C9orf116Q5BN46 136 aaPredicted RBP10.7□□□□□ -0.7
RETREG3-212ENST00000593251 PHF5AQ7RTV0 110 aaKnown RBP10.7□□□□□ -0.7
RETREG3-212ENST00000593251 C1orf196B1AJZ1 125 aa10.69□□□□□ -0.7
RETREG3-212ENST00000593251 SMKR1H3BMG3 65 aa10.69□□□□□ -0.7
RETREG3-212ENST00000593251 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.69□□□□□ -0.7
RETREG3-212ENST00000593251 RAB4AP20338 218 aa10.69□□□□□ -0.7
RETREG3-212ENST00000593251 CEBPGP53567 150 aa10.69□□□□□ -0.7
RETREG3-212ENST00000593251 CT83Q5H943 113 aa10.69□□□□□ -0.7
RETREG3-212ENST00000593251 AMN1Q8IY45 258 aa10.69□□□□□ -0.7
RETREG3-212ENST00000593251 TCTE3Q8IZS6 198 aa10.69□□□□□ -0.7
RETREG3-212ENST00000593251 TMEM191AQ9H0A3 160 aa10.69□□□□□ -0.7
RETREG3-212ENST00000593251 TRAV13-1A0A0B4J241 112 aa10.68□□□□□ -0.7
RETREG3-212ENST00000593251 A0A1B0GUT8 65 aa10.68□□□□□ -0.7
RETREG3-212ENST00000593251 APOMO95445 188 aa10.68□□□□□ -0.7
RETREG3-212ENST00000593251 BLOC1S1P78537 153 aa10.68□□□□□ -0.7
RETREG3-212ENST00000593251 C1orf137Q5JT78 98 aa10.68□□□□□ -0.7
RETREG3-212ENST00000593251 C5orf38Q86SI9 138 aa10.68□□□□□ -0.7
RETREG3-212ENST00000593251 OPRPNQ99935 248 aaPredicted RBP10.68□□□□□ -0.7
RETREG3-212ENST00000593251 HIGD1CA8MV81 97 aa10.67□□□□□ -0.7
RETREG3-212ENST00000593251 FCER1GP30273 86 aa10.67□□□□□ -0.7
RETREG3-212ENST00000593251 SMAGPQ0VAQ4 97 aa10.67□□□□□ -0.7
RETREG3-212ENST00000593251 UBE2D4Q9Y2X8 147 aa10.67□□□□□ -0.7
RETREG3-212ENST00000593251 TSKUQ8WUA8 353 aa10.66□□□□□ -0.7
RETREG3-212ENST00000593251 C2orf48Q96LS8 159 aa10.66□□□□□ -0.7
RETREG3-212ENST00000593251 VCYO14598 125 aa10.65□□□□□ -0.7
RETREG3-212ENST00000593251 Q6ZUT4 128 aa10.65□□□□□ -0.7
RETREG3-212ENST00000593251 PRR26Q8N8Z3 221 aa10.65□□□□□ -0.7
RETREG3-212ENST00000593251 PPP1R17O96001 155 aa10.64□□□□□ -0.71
RETREG3-212ENST00000593251 SPAG11BQ08648 103 aa10.64□□□□□ -0.71
RETREG3-212ENST00000593251 CSDC2Q9Y534 153 aaKnown RBP10.64□□□□□ -0.71
RETREG3-212ENST00000593251 NRACQ8N912 160 aa10.63□□□□□ -0.71
RETREG3-212ENST00000593251 SMIM7Q9BQ49 75 aa10.63□□□□□ -0.71
RETREG3-212ENST00000593251 SUMO2P61956 95 aaKnown RBP10.62□□□□□ -0.71
RETREG3-212ENST00000593251 RIGQ13278 110 aa10.62□□□□□ -0.71
RETREG3-212ENST00000593251 ALKAL2Q6UX46 152 aa10.62□□□□□ -0.71
RETREG3-212ENST00000593251 LINC01551Q86U37 167 aa10.62□□□□□ -0.71
RETREG3-212ENST00000593251 KRTAP11-1Q8IUC1 163 aa10.62□□□□□ -0.71
RETREG3-212ENST00000593251 OSTCQ9NRP0 149 aa10.62□□□□□ -0.71
RETREG3-212ENST00000593251 FAM168BA1KXE4 195 aa10.61□□□□□ -0.71
RETREG3-212ENST00000593251 IGLV7-43P04211 117 aa10.61□□□□□ -0.71
RETREG3-212ENST00000593251 TMEM18Q96B42 140 aa10.61□□□□□ -0.71
RETREG3-212ENST00000593251 KIR2DL4Q99706 377 aa10.61□□□□□ -0.71
RETREG3-212ENST00000593251 EIF5A2Q9GZV4 153 aaKnown RBP10.61□□□□□ -0.71
RETREG3-212ENST00000593251 RNF151Q2KHN1 245 aa10.6□□□□□ -0.71
RETREG3-212ENST00000593251 A0A087WZ39 114 aa10.59□□□□□ -0.71
RETREG3-212ENST00000593251 ZNF727A8MUV8 499 aa10.59□□□□□ -0.71
RETREG3-212ENST00000593251 PPP1R2P9O14990 202 aa10.59□□□□□ -0.71
RETREG3-212ENST00000593251 ORAOV1Q8WV07 137 aa10.59□□□□□ -0.71
RETREG3-212ENST00000593251 DIRC1Q969H9 104 aa10.59□□□□□ -0.71
RETREG3-212ENST00000593251 RPL39P62891 51 aaKnown RBP10.58□□□□□ -0.72
RETREG3-212ENST00000593251 C10orf25Q5T742 122 aa10.58□□□□□ -0.72
RETREG3-212ENST00000593251 OR10D4PQ8NGN7 298 aa10.58□□□□□ -0.72
RETREG3-212ENST00000593251 TIMM21Q9BVV7 248 aa10.58□□□□□ -0.72
RETREG3-212ENST00000593251 V9GYV3 84 aa10.58□□□□□ -0.72
RETREG3-212ENST00000593251 H0Y9J4 135 aa10.57□□□□□ -0.72
RETREG3-212ENST00000593251 MRPL51Q4U2R6 128 aaKnown RBP10.57□□□□□ -0.72
RETREG3-212ENST00000593251 FAM19A5Q7Z5A7 132 aaPredicted RBP10.57□□□□□ -0.72
RETREG3-212ENST00000593251 FAM104AQ969W3 186 aa10.57□□□□□ -0.72
RETREG3-212ENST00000593251 MRPL35Q9NZE8 188 aaKnown RBP10.57□□□□□ -0.72
RETREG3-212ENST00000593251 NDUFA1O15239 70 aa10.55□□□□□ -0.72
RETREG3-212ENST00000593251 FAM104BQ5XKR9 115 aa10.55□□□□□ -0.72
RETREG3-212ENST00000593251 UNQ6190/PRO20217Q6UXQ8 127 aa10.55□□□□□ -0.72
RETREG3-212ENST00000593251 IMMP2LQ96T52 175 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms