RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 TRAV26-2A0A0B4J265 109 aa9.53□□□□□ -0.88
VAPA-209ENST00000585042 PPP1R17O96001 155 aa9.53□□□□□ -0.88
VAPA-209ENST00000585042 AMTP48728 403 aa9.53□□□□□ -0.88
VAPA-209ENST00000585042 SPACA4Q8TDM5 124 aa9.53□□□□□ -0.88
VAPA-209ENST00000585042 MRAP2Q96G30 205 aa9.53□□□□□ -0.88
VAPA-209ENST00000585042 PKHD1L1Q86WI1 4243 aa9.53□□□□□ -0.88
VAPA-209ENST00000585042 H7C423 109 aa9.52□□□□□ -0.89
VAPA-209ENST00000585042 LORP23490 312 aaPredicted RBP9.52□□□□□ -0.89
VAPA-209ENST00000585042 ANAPC16Q96DE5 110 aa9.52□□□□□ -0.89
VAPA-209ENST00000585042 F8W036 122 aa9.51□□□□□ -0.89
VAPA-209ENST00000585042 EIF4EBP3O60516 100 aaPredicted RBP9.51□□□□□ -0.89
VAPA-209ENST00000585042 NCR2O95944 276 aa9.51□□□□□ -0.89
VAPA-209ENST00000585042 RPS10P46783 165 aaKnown RBP9.51□□□□□ -0.89
VAPA-209ENST00000585042 CAMPP49913 170 aa9.51□□□□□ -0.89
VAPA-209ENST00000585042 C7orf33Q8WU49 177 aa9.51□□□□□ -0.89
VAPA-209ENST00000585042 ST20Q9HBF5 79 aa9.51□□□□□ -0.89
VAPA-209ENST00000585042 RAB4AP20338 218 aa9.5□□□□□ -0.89
VAPA-209ENST00000585042 AMN1Q8IY45 258 aa9.5□□□□□ -0.89
VAPA-209ENST00000585042 C15orf56Q8N910 161 aa9.5□□□□□ -0.89
VAPA-209ENST00000585042 RPL39LQ96EH5 51 aaKnown RBP9.5□□□□□ -0.89
VAPA-209ENST00000585042 TRBV6-5A0A0K0K1A5 114 aa9.49□□□□□ -0.89
VAPA-209ENST00000585042 TMEM218A2RU14 115 aa9.49□□□□□ -0.89
VAPA-209ENST00000585042 LINC00862A6NCI5 91 aa9.49□□□□□ -0.89
VAPA-209ENST00000585042 GAGE12HA6NDE8 117 aa9.49□□□□□ -0.89
VAPA-209ENST00000585042 SDHAF1A6NFY7 115 aa9.49□□□□□ -0.89
VAPA-209ENST00000585042 PMCHP20382 165 aa9.49□□□□□ -0.89
VAPA-209ENST00000585042 HBBP68871 147 aa9.49□□□□□ -0.89
VAPA-209ENST00000585042 I3L3M4 83 aa9.48□□□□□ -0.89
VAPA-209ENST00000585042 APCSP02743 223 aa9.48□□□□□ -0.89
VAPA-209ENST00000585042 CHTF8P0CG12 524 aa9.48□□□□□ -0.89
VAPA-209ENST00000585042 FAM104BQ5XKR9 115 aa9.48□□□□□ -0.89
VAPA-209ENST00000585042 AMMECR1LQ6DCA0 310 aa9.48□□□□□ -0.89
VAPA-209ENST00000585042 MRPL54Q6P161 138 aaKnown RBP9.48□□□□□ -0.89
VAPA-209ENST00000585042 ATP5L2Q7Z4Y8 100 aa9.48□□□□□ -0.89
VAPA-209ENST00000585042 COMMD7Q86VX2 200 aa9.48□□□□□ -0.89
VAPA-209ENST00000585042 COX6A2Q02221 97 aa9.47□□□□□ -0.89
VAPA-209ENST00000585042 PKIGQ9Y2B9 76 aa9.47□□□□□ -0.89
VAPA-209ENST00000585042 GVQW2A0A096LPI5 108 aaPredicted RBP9.46□□□□□ -0.9
VAPA-209ENST00000585042 VCYO14598 125 aa9.46□□□□□ -0.9
VAPA-209ENST00000585042 PHOX2AO14813 284 aa9.46□□□□□ -0.9
VAPA-209ENST00000585042 ZNF25P17030 456 aaPredicted RBP9.46□□□□□ -0.9
VAPA-209ENST00000585042 CKS2P33552 79 aa9.46□□□□□ -0.9
VAPA-209ENST00000585042 CHCHD10Q8WYQ3 142 aaPredicted RBP9.46□□□□□ -0.9
VAPA-209ENST00000585042 SEC11CQ9BY50 192 aa9.46□□□□□ -0.9
VAPA-209ENST00000585042 LINC00474Q9P2X8 69 aa9.46□□□□□ -0.9
VAPA-209ENST00000585042 UBR4Q5T4S7 5183 aa9.46□□□□□ -0.9
VAPA-209ENST00000585042 MRPL51Q4U2R6 128 aaKnown RBP9.45□□□□□ -0.9
VAPA-209ENST00000585042 CTDSP1Q9GZU7 261 aa9.45□□□□□ -0.9
VAPA-209ENST00000585042 TRBV27A0A0K0K1C4 114 aa9.44□□□□□ -0.9
VAPA-209ENST00000585042 A0A1B0GXF2 115 aa9.44□□□□□ -0.9
VAPA-209ENST00000585042 PPBPP02775 128 aa9.44□□□□□ -0.9
VAPA-209ENST00000585042 MAJINQ3KP22 176 aa9.44□□□□□ -0.9
VAPA-209ENST00000585042 RNASEKQ6P5S7 137 aaKnown RBP9.44□□□□□ -0.9
VAPA-209ENST00000585042 OR5A1Q8NGJ0 315 aa9.44□□□□□ -0.9
VAPA-209ENST00000585042 PRSS3P2Q8NHM4 247 aa9.44□□□□□ -0.9
VAPA-209ENST00000585042 LINC01600Q96MT4 127 aa9.44□□□□□ -0.9
VAPA-209ENST00000585042 IMMP2LQ96T52 175 aa9.44□□□□□ -0.9
VAPA-209ENST00000585042 KIR2DL4Q99706 377 aa9.44□□□□□ -0.9
VAPA-209ENST00000585042 IGKV3OR2-268A0A0C4DH90 116 aa9.43□□□□□ -0.9
VAPA-209ENST00000585042 SMKR1H3BMG3 65 aa9.43□□□□□ -0.9
VAPA-209ENST00000585042 TCAPO15273 167 aa9.43□□□□□ -0.9
VAPA-209ENST00000585042 FGF6P10767 208 aa9.43□□□□□ -0.9
VAPA-209ENST00000585042 FCER1GP30273 86 aa9.43□□□□□ -0.9
VAPA-209ENST00000585042 POLR2KP53803 58 aaKnown RBP9.43□□□□□ -0.9
VAPA-209ENST00000585042 SUMO2P61956 95 aaKnown RBP9.43□□□□□ -0.9
VAPA-209ENST00000585042 SMAGPQ0VAQ4 97 aa9.43□□□□□ -0.9
VAPA-209ENST00000585042 HIGD2BQ4VC39 106 aa9.43□□□□□ -0.9
VAPA-209ENST00000585042 STPG4Q8N801 248 aa9.43□□□□□ -0.9
VAPA-209ENST00000585042 BTF3L4Q96K17 158 aa9.43□□□□□ -0.9
VAPA-209ENST00000585042 C20orf78Q9BR46 151 aa9.43□□□□□ -0.9
VAPA-209ENST00000585042 GAS8-AS1O95177 125 aa9.42□□□□□ -0.9
VAPA-209ENST00000585042 FOXI1Q12951 378 aa9.42□□□□□ -0.9
VAPA-209ENST00000585042 TMEM101Q96IK0 257 aa9.42□□□□□ -0.9
VAPA-209ENST00000585042 TRBV24-1A0A075B6N3 115 aa9.41□□□□□ -0.9
VAPA-209ENST00000585042 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.41□□□□□ -0.9
VAPA-209ENST00000585042 IGKV2-29A2NJV5 120 aaPredicted RBP9.41□□□□□ -0.9
VAPA-209ENST00000585042 ADCYAP1P18509 176 aa9.41□□□□□ -0.9
VAPA-209ENST00000585042 S100PP25815 95 aa9.41□□□□□ -0.9
VAPA-209ENST00000585042 PRR3P79522 188 aaKnown RBP9.41□□□□□ -0.9
VAPA-209ENST00000585042 NRACQ8N912 160 aa9.41□□□□□ -0.9
VAPA-209ENST00000585042 TMEM242Q9NWH2 141 aa9.41□□□□□ -0.9
VAPA-209ENST00000585042 IGHV1-58A0A0C4DH39 117 aa9.4□□□□□ -0.9
VAPA-209ENST00000585042 IGKV2-24A0A0C4DH68 120 aa9.4□□□□□ -0.9
VAPA-209ENST00000585042 LINC00959A0A1B0GUT2 108 aa9.4□□□□□ -0.9
VAPA-209ENST00000585042 D6R8Y8 96 aa9.4□□□□□ -0.9
VAPA-209ENST00000585042 TNFRSF6BO95407 300 aa9.4□□□□□ -0.9
VAPA-209ENST00000585042 TSHBP01222 138 aa9.4□□□□□ -0.9
VAPA-209ENST00000585042 SLC7A5P1Q8MH63 180 aa9.4□□□□□ -0.9
VAPA-209ENST00000585042 ORMDL3Q8N138 153 aa9.4□□□□□ -0.9
VAPA-209ENST00000585042 TRAV9-1A0A075B6T8 112 aa9.39□□□□□ -0.91
VAPA-209ENST00000585042 C7orf77A4D0Y5 90 aa9.39□□□□□ -0.91
VAPA-209ENST00000585042 ESDP10768 282 aa9.39□□□□□ -0.91
VAPA-209ENST00000585042 RPL32P62910 135 aaKnown RBP9.39□□□□□ -0.91
VAPA-209ENST00000585042 SPINK6Q6UWN8 80 aa9.39□□□□□ -0.91
VAPA-209ENST00000585042 TMEM136Q6ZRR5 245 aa9.39□□□□□ -0.91
VAPA-209ENST00000585042 TMEM18Q96B42 140 aa9.39□□□□□ -0.91
VAPA-209ENST00000585042 A0A096LNI7 61 aa9.38□□□□□ -0.91
VAPA-209ENST00000585042 SS18Q15532 418 aa9.38□□□□□ -0.91
VAPA-209ENST00000585042 MRPL52Q86TS9 123 aaKnown RBP9.38□□□□□ -0.91
VAPA-209ENST00000585042 MRPL18Q9H0U6 180 aaKnown RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms