RNA–Protein interactions for RNA: ENST00000583732.1

SREBF1-222, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 4

Gene SREBF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-222	ENST00000583732		A0A0J9YXV3	536 aa		9.42	□□□□□ -0.9
SREBF1-222	ENST00000583732		A8MWL6	223 aa		9.42	□□□□□ -0.9
SREBF1-222	ENST00000583732	ZNF561-AS1	K7EIQ3	104 aa		9.42	□□□□□ -0.9
SREBF1-222	ENST00000583732	LINC00474	Q9P2X8	69 aa		9.42	□□□□□ -0.9
SREBF1-222	ENST00000583732	PKIG	Q9Y2B9	76 aa		9.42	□□□□□ -0.9
SREBF1-222	ENST00000583732	SYCN	Q0VAF6	134 aa		9.41	□□□□□ -0.9
SREBF1-222	ENST00000583732	REG3G	Q6UW15	175 aa		9.41	□□□□□ -0.9
SREBF1-222	ENST00000583732	SPINK6	Q6UWN8	80 aa		9.41	□□□□□ -0.9
SREBF1-222	ENST00000583732	FAM231D	Q6ZW35	169 aa		9.41	□□□□□ -0.9
SREBF1-222	ENST00000583732	TCTE3	Q8IZS6	198 aa		9.41	□□□□□ -0.9
SREBF1-222	ENST00000583732	CAMP	P49913	170 aa		9.4	□□□□□ -0.9
SREBF1-222	ENST00000583732	GAGE2B	Q13066	116 aa		9.4	□□□□□ -0.9
SREBF1-222	ENST00000583732	CD164L2	Q6UWJ8	174 aa		9.4	□□□□□ -0.9
SREBF1-222	ENST00000583732	CDC42SE2	Q9NRR3	84 aa		9.4	□□□□□ -0.9
SREBF1-222	ENST00000583732	RNF213	Q63HN8	5207 aa		9.4	□□□□□ -0.9
SREBF1-222	ENST00000583732	C7orf77	A4D0Y5	90 aa		9.39	□□□□□ -0.91
SREBF1-222	ENST00000583732	TMEM250	H0YL14	139 aa		9.39	□□□□□ -0.91
SREBF1-222	ENST00000583732	SMKR1	H3BMG3	65 aa		9.39	□□□□□ -0.91
SREBF1-222	ENST00000583732	RNASE13	Q5GAN3	156 aa	Known RBP	9.39	□□□□□ -0.91
SREBF1-222	ENST00000583732		Q6ZRP5	223 aa		9.39	□□□□□ -0.91
SREBF1-222	ENST00000583732	ZNF664	Q8N3J9	261 aa		9.39	□□□□□ -0.91
SREBF1-222	ENST00000583732	IGLV4-69	A0A075B6H9	119 aa		9.38	□□□□□ -0.91
SREBF1-222	ENST00000583732	MAL	P21145	153 aa		9.38	□□□□□ -0.91
SREBF1-222	ENST00000583732	PTTG1IP	P53801	180 aa		9.38	□□□□□ -0.91
SREBF1-222	ENST00000583732	POLR2K	P53803	58 aa	Known RBP	9.38	□□□□□ -0.91
SREBF1-222	ENST00000583732	CT83	Q5H943	113 aa		9.38	□□□□□ -0.91
SREBF1-222	ENST00000583732	ALKAL2	Q6UX46	152 aa		9.38	□□□□□ -0.91
SREBF1-222	ENST00000583732	MRPL52	Q86TS9	123 aa	Known RBP	9.38	□□□□□ -0.91
SREBF1-222	ENST00000583732	AMN1	Q8IY45	258 aa		9.38	□□□□□ -0.91
SREBF1-222	ENST00000583732	TMEM191A	Q9H0A3	160 aa		9.38	□□□□□ -0.91
SREBF1-222	ENST00000583732	LOC107984640	A0A0U1RRK4	108 aa		9.37	□□□□□ -0.91
SREBF1-222	ENST00000583732		A0A1B0GUT8	65 aa		9.37	□□□□□ -0.91
SREBF1-222	ENST00000583732	HIGD1C	A8MV81	97 aa		9.37	□□□□□ -0.91
SREBF1-222	ENST00000583732	RAB4A	P20338	218 aa		9.37	□□□□□ -0.91
SREBF1-222	ENST00000583732	KRTAP10-8	P60410	259 aa		9.37	□□□□□ -0.91
SREBF1-222	ENST00000583732	ISOC2	Q96AB3	205 aa		9.37	□□□□□ -0.91
SREBF1-222	ENST00000583732	FCER1G	P30273	86 aa		9.36	□□□□□ -0.91
SREBF1-222	ENST00000583732	BLOC1S1	P78537	153 aa		9.36	□□□□□ -0.91
SREBF1-222	ENST00000583732	SRSF9	Q13242	221 aa	Known RBP eCLIP	9.36	□□□□□ -0.91
SREBF1-222	ENST00000583732	TSKU	Q8WUA8	353 aa		9.36	□□□□□ -0.91
SREBF1-222	ENST00000583732	CAMK2N2	Q96S95	79 aa		9.36	□□□□□ -0.91
SREBF1-222	ENST00000583732	SMIM7	Q9BQ49	75 aa		9.36	□□□□□ -0.91
SREBF1-222	ENST00000583732	TRBV27	A0A0K0K1C4	114 aa		9.35	□□□□□ -0.91
SREBF1-222	ENST00000583732		A0A1W2PNN7	141 aa		9.35	□□□□□ -0.91
SREBF1-222	ENST00000583732	COX7A2L	O14548	114 aa		9.35	□□□□□ -0.91
SREBF1-222	ENST00000583732	RPL18A	Q02543	176 aa	Known RBP	9.35	□□□□□ -0.91
SREBF1-222	ENST00000583732	TRAV13-1	A0A0B4J241	112 aa		9.34	□□□□□ -0.91
SREBF1-222	ENST00000583732	C5orf38	Q86SI9	138 aa		9.34	□□□□□ -0.91
SREBF1-222	ENST00000583732	LINC01551	Q86U37	167 aa		9.34	□□□□□ -0.91
SREBF1-222	ENST00000583732	NUP35	Q8NFH5	326 aa		9.34	□□□□□ -0.91
SREBF1-222	ENST00000583732	C1orf196	B1AJZ1	125 aa		9.33	□□□□□ -0.92
SREBF1-222	ENST00000583732	VCY	O14598	125 aa		9.33	□□□□□ -0.92
SREBF1-222	ENST00000583732		Q6ZUT4	128 aa		9.33	□□□□□ -0.92
SREBF1-222	ENST00000583732	EIF5A2	Q9GZV4	153 aa	Known RBP	9.33	□□□□□ -0.92
SREBF1-222	ENST00000583732	UBE2D4	Q9Y2X8	147 aa		9.33	□□□□□ -0.92
SREBF1-222	ENST00000583732	ZNF727	A8MUV8	499 aa		9.32	□□□□□ -0.92
SREBF1-222	ENST00000583732	APOM	O95445	188 aa		9.32	□□□□□ -0.92
SREBF1-222	ENST00000583732	MT-ND6	P03923	174 aa		9.32	□□□□□ -0.92
SREBF1-222	ENST00000583732	RIG	Q13278	110 aa		9.32	□□□□□ -0.92
SREBF1-222	ENST00000583732	C9orf116	Q5BN46	136 aa	Predicted RBP	9.32	□□□□□ -0.92
SREBF1-222	ENST00000583732	NRAC	Q8N912	160 aa		9.32	□□□□□ -0.92
SREBF1-222	ENST00000583732	FAM210A	Q96ND0	272 aa		9.32	□□□□□ -0.92
SREBF1-222	ENST00000583732	OPRPN	Q99935	248 aa	Predicted RBP	9.32	□□□□□ -0.92
SREBF1-222	ENST00000583732	OSTC	Q9NRP0	149 aa		9.32	□□□□□ -0.92
SREBF1-222	ENST00000583732	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	9.31	□□□□□ -0.92
SREBF1-222	ENST00000583732	SUMO2	P61956	95 aa	Known RBP	9.31	□□□□□ -0.92
SREBF1-222	ENST00000583732	SPAG11B	Q08648	103 aa		9.31	□□□□□ -0.92
SREBF1-222	ENST00000583732	PHF5A	Q7RTV0	110 aa	Known RBP	9.31	□□□□□ -0.92
SREBF1-222	ENST00000583732	KIR2DL4	Q99706	377 aa		9.31	□□□□□ -0.92
SREBF1-222	ENST00000583732	PSORS1C2	Q9UIG4	136 aa		9.31	□□□□□ -0.92
SREBF1-222	ENST00000583732	SMAGP	Q0VAQ4	97 aa		9.3	□□□□□ -0.92
SREBF1-222	ENST00000583732	C1orf137	Q5JT78	98 aa		9.3	□□□□□ -0.92
SREBF1-222	ENST00000583732		V9GYV3	84 aa		9.3	□□□□□ -0.92
SREBF1-222	ENST00000583732	MRPL51	Q4U2R6	128 aa	Known RBP	9.29	□□□□□ -0.92
SREBF1-222	ENST00000583732	AKAP14	Q86UN6	197 aa		9.29	□□□□□ -0.92
SREBF1-222	ENST00000583732	C2orf48	Q96LS8	159 aa		9.29	□□□□□ -0.92
SREBF1-222	ENST00000583732	CSDC2	Q9Y534	153 aa	Known RBP	9.29	□□□□□ -0.92
SREBF1-222	ENST00000583732	hCG_2014768	A0A024R1R8	64 aa		9.28	□□□□□ -0.92
SREBF1-222	ENST00000583732	PPP1R17	O96001	155 aa		9.28	□□□□□ -0.92
SREBF1-222	ENST00000583732	SRP19	P09132	144 aa	Known RBP	9.28	□□□□□ -0.92
SREBF1-222	ENST00000583732	PPP1R2P9	O14990	202 aa		9.27	□□□□□ -0.93
SREBF1-222	ENST00000583732	RPL39	P62891	51 aa	Known RBP	9.27	□□□□□ -0.93
SREBF1-222	ENST00000583732	ORAOV1	Q8WV07	137 aa		9.27	□□□□□ -0.93
SREBF1-222	ENST00000583732	TMEM18	Q96B42	140 aa		9.27	□□□□□ -0.93
SREBF1-222	ENST00000583732	LPA	P08519	4548 aa		9.26	□□□□□ -0.93
SREBF1-222	ENST00000583732	NAT8B	Q9UHF3	227 aa		9.26	□□□□□ -0.93
SREBF1-222	ENST00000583732	ADIRF	Q15847	76 aa		9.25	□□□□□ -0.93
SREBF1-222	ENST00000583732	FAM104B	Q5XKR9	115 aa		9.25	□□□□□ -0.93
SREBF1-222	ENST00000583732	OR10D4P	Q8NGN7	298 aa		9.25	□□□□□ -0.93
SREBF1-222	ENST00000583732	TIMM21	Q9BVV7	248 aa		9.25	□□□□□ -0.93
SREBF1-222	ENST00000583732	FAM168B	A1KXE4	195 aa		9.24	□□□□□ -0.93
SREBF1-222	ENST00000583732	CKS2	P33552	79 aa		9.24	□□□□□ -0.93
SREBF1-222	ENST00000583732	RPL23	P62829	140 aa	Known RBP	9.24	□□□□□ -0.93
SREBF1-222	ENST00000583732	TMEM241	Q24JQ0	296 aa		9.23	□□□□□ -0.93
SREBF1-222	ENST00000583732	RNF151	Q2KHN1	245 aa		9.23	□□□□□ -0.93
SREBF1-222	ENST00000583732	FAM74A3	Q4VXF1	159 aa		9.23	□□□□□ -0.93
SREBF1-222	ENST00000583732	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	9.23	□□□□□ -0.93
SREBF1-222	ENST00000583732	PRR26	Q8N8Z3	221 aa		9.23	□□□□□ -0.93
SREBF1-222	ENST00000583732		A0A087WZ39	114 aa		9.22	□□□□□ -0.93
SREBF1-222	ENST00000583732	IFITM10	A6NMD0	228 aa		9.22	□□□□□ -0.93

Retrieved 100 of 20,778 RNA–protein pairs in 307.8 ms