RNA–Protein interactions for RNA: ENST00000580508.1

RBFOX3-204, Transcript of RNA binding fox-1 homolog 3, humanhuman

TSL 2

Gene RBFOX3, Length 260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3-204ENST00000580508 MRPL52Q86TS9 123 aaKnown RBP13.38□□□□□ -0.27
RBFOX3-204ENST00000580508 TMEM101Q96IK0 257 aa13.38□□□□□ -0.27
RBFOX3-204ENST00000580508 CARD19Q96LW7 228 aa13.38□□□□□ -0.27
RBFOX3-204ENST00000580508 A8MWL6 223 aa13.37□□□□□ -0.27
RBFOX3-204ENST00000580508 GATCO43716 136 aaKnown RBP13.37□□□□□ -0.27
RBFOX3-204ENST00000580508 CDC42SE2Q9NRR3 84 aa13.37□□□□□ -0.27
RBFOX3-204ENST00000580508 TMEM250H0YL14 139 aa13.36□□□□□ -0.27
RBFOX3-204ENST00000580508 POLR2KP53803 58 aaKnown RBP13.36□□□□□ -0.27
RBFOX3-204ENST00000580508 CD164L2Q6UWJ8 174 aa13.36□□□□□ -0.27
RBFOX3-204ENST00000580508 TCTE3Q8IZS6 198 aa13.36□□□□□ -0.27
RBFOX3-204ENST00000580508 TMEM242Q9NWH2 141 aa13.36□□□□□ -0.27
RBFOX3-204ENST00000580508 SYCNQ0VAF6 134 aa13.35□□□□□ -0.27
RBFOX3-204ENST00000580508 CT83Q5H943 113 aa13.35□□□□□ -0.27
RBFOX3-204ENST00000580508 REG3GQ6UW15 175 aa13.35□□□□□ -0.27
RBFOX3-204ENST00000580508 MRAP2Q96G30 205 aa13.35□□□□□ -0.27
RBFOX3-204ENST00000580508 ST20Q9HBF5 79 aa13.35□□□□□ -0.27
RBFOX3-204ENST00000580508 TRBV27A0A0K0K1C4 114 aa13.34□□□□□ -0.27
RBFOX3-204ENST00000580508 SS18Q15532 418 aa13.34□□□□□ -0.27
RBFOX3-204ENST00000580508 Q6ZRP5 223 aa13.34□□□□□ -0.27
RBFOX3-204ENST00000580508 ZNF561-AS1K7EIQ3 104 aa13.32□□□□□ -0.28
RBFOX3-204ENST00000580508 PTTG1IPP53801 180 aa13.32□□□□□ -0.28
RBFOX3-204ENST00000580508 ZNF664Q8N3J9 261 aa13.32□□□□□ -0.28
RBFOX3-204ENST00000580508 TMEM191AQ9H0A3 160 aa13.32□□□□□ -0.28
RBFOX3-204ENST00000580508 CAMPP49913 170 aa13.31□□□□□ -0.28
RBFOX3-204ENST00000580508 C7orf77A4D0Y5 90 aa13.3□□□□□ -0.28
RBFOX3-204ENST00000580508 RAB4AP20338 218 aa13.3□□□□□ -0.28
RBFOX3-204ENST00000580508 A0A1B0GUT8 65 aa13.29□□□□□ -0.28
RBFOX3-204ENST00000580508 BORCS7Q96B45 105 aa13.29□□□□□ -0.28
RBFOX3-204ENST00000580508 IGLV4-69A0A075B6H9 119 aa13.28□□□□□ -0.28
RBFOX3-204ENST00000580508 LOC107984640A0A0U1RRK4 108 aa13.28□□□□□ -0.28
RBFOX3-204ENST00000580508 HIGD1CA8MV81 97 aa13.28□□□□□ -0.28
RBFOX3-204ENST00000580508 TSKUQ8WUA8 353 aa13.28□□□□□ -0.28
RBFOX3-204ENST00000580508 CSDC2Q9Y534 153 aaKnown RBP13.28□□□□□ -0.28
RBFOX3-204ENST00000580508 A0A1W2PNN7 141 aa13.27□□□□□ -0.29
RBFOX3-204ENST00000580508 C1orf196B1AJZ1 125 aa13.27□□□□□ -0.29
RBFOX3-204ENST00000580508 NUP35Q8NFH5 326 aa13.27□□□□□ -0.29
RBFOX3-204ENST00000580508 ISOC2Q96AB3 205 aa13.27□□□□□ -0.29
RBFOX3-204ENST00000580508 BLOC1S1P78537 153 aa13.26□□□□□ -0.29
RBFOX3-204ENST00000580508 GAGE2BQ13066 116 aa13.26□□□□□ -0.29
RBFOX3-204ENST00000580508 AMN1Q8IY45 258 aa13.26□□□□□ -0.29
RBFOX3-204ENST00000580508 COX7A2LO14548 114 aa13.25□□□□□ -0.29
RBFOX3-204ENST00000580508 LINC01551Q86U37 167 aa13.25□□□□□ -0.29
RBFOX3-204ENST00000580508 UBE2D4Q9Y2X8 147 aa13.25□□□□□ -0.29
RBFOX3-204ENST00000580508 VCYO14598 125 aa13.24□□□□□ -0.29
RBFOX3-204ENST00000580508 OSTCQ9NRP0 149 aa13.24□□□□□ -0.29
RBFOX3-204ENST00000580508 APOMO95445 188 aa13.23□□□□□ -0.29
RBFOX3-204ENST00000580508 MALP21145 153 aa13.23□□□□□ -0.29
RBFOX3-204ENST00000580508 ALKAL2Q6UX46 152 aa13.23□□□□□ -0.29
RBFOX3-204ENST00000580508 NRACQ8N912 160 aa13.23□□□□□ -0.29
RBFOX3-204ENST00000580508 C2orf48Q96LS8 159 aa13.23□□□□□ -0.29
RBFOX3-204ENST00000580508 SMKR1H3BMG3 65 aa13.22□□□□□ -0.29
RBFOX3-204ENST00000580508 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.22□□□□□ -0.29
RBFOX3-204ENST00000580508 CEBPGP53567 150 aa13.22□□□□□ -0.29
RBFOX3-204ENST00000580508 CAMK2N2Q96S95 79 aa13.22□□□□□ -0.29
RBFOX3-204ENST00000580508 SMIM7Q9BQ49 75 aa13.22□□□□□ -0.29
RBFOX3-204ENST00000580508 SUMO2P61956 95 aaKnown RBP13.21□□□□□ -0.29
RBFOX3-204ENST00000580508 C9orf116Q5BN46 136 aaPredicted RBP13.21□□□□□ -0.29
RBFOX3-204ENST00000580508 PSORS1C2Q9UIG4 136 aa13.21□□□□□ -0.29
RBFOX3-204ENST00000580508 PPP1R17O96001 155 aa13.2□□□□□ -0.3
RBFOX3-204ENST00000580508 FCER1GP30273 86 aa13.2□□□□□ -0.3
RBFOX3-204ENST00000580508 SMAGPQ0VAQ4 97 aa13.2□□□□□ -0.3
RBFOX3-204ENST00000580508 RNASE13Q5GAN3 156 aaKnown RBP13.2□□□□□ -0.3
RBFOX3-204ENST00000580508 TIMM21Q9BVV7 248 aa13.2□□□□□ -0.3
RBFOX3-204ENST00000580508 TRAV13-1A0A0B4J241 112 aa13.19□□□□□ -0.3
RBFOX3-204ENST00000580508 V9GYV3 84 aa13.19□□□□□ -0.3
RBFOX3-204ENST00000580508 RIGQ13278 110 aa13.18□□□□□ -0.3
RBFOX3-204ENST00000580508 RNF151Q2KHN1 245 aa13.18□□□□□ -0.3
RBFOX3-204ENST00000580508 Q6ZUT4 128 aa13.18□□□□□ -0.3
RBFOX3-204ENST00000580508 C5orf38Q86SI9 138 aa13.18□□□□□ -0.3
RBFOX3-204ENST00000580508 KIR2DL4Q99706 377 aa13.18□□□□□ -0.3
RBFOX3-204ENST00000580508 ZNF727A8MUV8 499 aa13.17□□□□□ -0.3
RBFOX3-204ENST00000580508 PPP1R2P9O14990 202 aa13.16□□□□□ -0.3
RBFOX3-204ENST00000580508 MT-ND6P03923 174 aa13.16□□□□□ -0.3
RBFOX3-204ENST00000580508 EIF5A2Q9GZV4 153 aaKnown RBP13.16□□□□□ -0.3
RBFOX3-204ENST00000580508 SRP19P09132 144 aaKnown RBP13.15□□□□□ -0.3
RBFOX3-204ENST00000580508 RPL18AQ02543 176 aaKnown RBP13.15□□□□□ -0.3
RBFOX3-204ENST00000580508 SPAG11BQ08648 103 aa13.15□□□□□ -0.3
RBFOX3-204ENST00000580508 PHF5AQ7RTV0 110 aaKnown RBP13.15□□□□□ -0.3
RBFOX3-204ENST00000580508 FAM104AQ969W3 186 aa13.15□□□□□ -0.3
RBFOX3-204ENST00000580508 OPRPNQ99935 248 aaPredicted RBP13.15□□□□□ -0.3
RBFOX3-204ENST00000580508 MRPL51Q4U2R6 128 aaKnown RBP13.14□□□□□ -0.31
RBFOX3-204ENST00000580508 FAM104BQ5XKR9 115 aa13.14□□□□□ -0.31
RBFOX3-204ENST00000580508 OR10D4PQ8NGN7 298 aa13.14□□□□□ -0.31
RBFOX3-204ENST00000580508 RPL32P62910 135 aaKnown RBP13.13□□□□□ -0.31
RBFOX3-204ENST00000580508 C1orf137Q5JT78 98 aa13.13□□□□□ -0.31
RBFOX3-204ENST00000580508 TMEM18Q96B42 140 aa13.13□□□□□ -0.31
RBFOX3-204ENST00000580508 MRPL35Q9NZE8 188 aaKnown RBP13.13□□□□□ -0.31
RBFOX3-204ENST00000580508 TRBV24-1A0A075B6N3 115 aa13.12□□□□□ -0.31
RBFOX3-204ENST00000580508 C20orf78Q9BR46 151 aa13.12□□□□□ -0.31
RBFOX3-204ENST00000580508 NAT8BQ9UHF3 227 aa13.12□□□□□ -0.31
RBFOX3-204ENST00000580508 IGHV3OR16-9A0A0B4J2B5 98 aa13.11□□□□□ -0.31
RBFOX3-204ENST00000580508 LINC00862A6NCI5 91 aa13.11□□□□□ -0.31
RBFOX3-204ENST00000580508 F8WDY8 70 aa13.11□□□□□ -0.31
RBFOX3-204ENST00000580508 LPAP08519 4548 aa13.1□□□□□ -0.31
RBFOX3-204ENST00000580508 RPL39P62891 51 aaKnown RBP13.1□□□□□ -0.31
RBFOX3-204ENST00000580508 IGLV7-43P04211 117 aa13.09□□□□□ -0.31
RBFOX3-204ENST00000580508 FAM74A3Q4VXF1 159 aa13.09□□□□□ -0.31
RBFOX3-204ENST00000580508 AKAP14Q86UN6 197 aa13.09□□□□□ -0.31
RBFOX3-204ENST00000580508 TCAPO15273 167 aa13.08□□□□□ -0.32
RBFOX3-204ENST00000580508 TLX1NBP0CAT3 122 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms