RNA–Protein interactions for RNA: ENST00000576601.1

CIITA-211, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 4

Gene CIITA, Length 626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-211ENST00000576601 SMIM15Q7Z3B0 74 aa8.53□□□□□ -1.04
CIITA-211ENST00000576601 TMEM250H0YL14 139 aa8.52□□□□□ -1.05
CIITA-211ENST00000576601 I3L3M4 83 aa8.52□□□□□ -1.05
CIITA-211ENST00000576601 ZNF25P17030 456 aaPredicted RBP8.52□□□□□ -1.05
CIITA-211ENST00000576601 PMCHP20382 165 aa8.52□□□□□ -1.05
CIITA-211ENST00000576601 HIGD1CA8MV81 97 aa8.51□□□□□ -1.05
CIITA-211ENST00000576601 A8MWL6 223 aa8.51□□□□□ -1.05
CIITA-211ENST00000576601 SMKR1H3BMG3 65 aa8.51□□□□□ -1.05
CIITA-211ENST00000576601 TEX261Q6UWH6 196 aa8.51□□□□□ -1.05
CIITA-211ENST00000576601 CARD19Q96LW7 228 aa8.51□□□□□ -1.05
CIITA-211ENST00000576601 RNASE13Q5GAN3 156 aaKnown RBP8.5□□□□□ -1.05
CIITA-211ENST00000576601 CT83Q5H943 113 aa8.5□□□□□ -1.05
CIITA-211ENST00000576601 LINC01551Q86U37 167 aa8.5□□□□□ -1.05
CIITA-211ENST00000576601 AMN1Q8IY45 258 aa8.5□□□□□ -1.05
CIITA-211ENST00000576601 MRAP2Q96G30 205 aa8.5□□□□□ -1.05
CIITA-211ENST00000576601 BTF3L4Q96K17 158 aa8.5□□□□□ -1.05
CIITA-211ENST00000576601 ST20Q9HBF5 79 aa8.5□□□□□ -1.05
CIITA-211ENST00000576601 IGHV1-58A0A0C4DH39 117 aa8.49□□□□□ -1.05
CIITA-211ENST00000576601 RAB4AP20338 218 aa8.49□□□□□ -1.05
CIITA-211ENST00000576601 POLR2KP53803 58 aaKnown RBP8.49□□□□□ -1.05
CIITA-211ENST00000576601 REG3GQ6UW15 175 aa8.49□□□□□ -1.05
CIITA-211ENST00000576601 SPINK6Q6UWN8 80 aa8.49□□□□□ -1.05
CIITA-211ENST00000576601 TMEM101Q96IK0 257 aa8.49□□□□□ -1.05
CIITA-211ENST00000576601 SMIM7Q9BQ49 75 aa8.49□□□□□ -1.05
CIITA-211ENST00000576601 TMEM191AQ9H0A3 160 aa8.49□□□□□ -1.05
CIITA-211ENST00000576601 CDC42SE2Q9NRR3 84 aa8.49□□□□□ -1.05
CIITA-211ENST00000576601 MUC17Q685J3 4493 aa8.48□□□□□ -1.05
CIITA-211ENST00000576601 hCG_2014768A0A024R1R8 64 aa8.48□□□□□ -1.05
CIITA-211ENST00000576601 A0A0U1RQV1 116 aa8.48□□□□□ -1.05
CIITA-211ENST00000576601 A0A1B0GUT8 65 aa8.48□□□□□ -1.05
CIITA-211ENST00000576601 SRSF9Q13242 221 aaKnown RBP eCLIP8.48□□□□□ -1.05
CIITA-211ENST00000576601 MRPL52Q86TS9 123 aaKnown RBP8.48□□□□□ -1.05
CIITA-211ENST00000576601 TSKUQ8WUA8 353 aa8.48□□□□□ -1.05
CIITA-211ENST00000576601 TRBV27A0A0K0K1C4 114 aa8.47□□□□□ -1.05
CIITA-211ENST00000576601 C7orf77A4D0Y5 90 aa8.47□□□□□ -1.05
CIITA-211ENST00000576601 BLOC1S1P78537 153 aa8.47□□□□□ -1.05
CIITA-211ENST00000576601 ZNF664Q8N3J9 261 aa8.47□□□□□ -1.05
CIITA-211ENST00000576601 IGLV4-69A0A075B6H9 119 aa8.46□□□□□ -1.06
CIITA-211ENST00000576601 SYCNQ0VAF6 134 aa8.46□□□□□ -1.06
CIITA-211ENST00000576601 SS18Q15532 418 aa8.46□□□□□ -1.06
CIITA-211ENST00000576601 CD164L2Q6UWJ8 174 aa8.46□□□□□ -1.06
CIITA-211ENST00000576601 AKAP14Q86UN6 197 aa8.46□□□□□ -1.06
CIITA-211ENST00000576601 NRACQ8N912 160 aa8.46□□□□□ -1.06
CIITA-211ENST00000576601 BORCS7Q96B45 105 aa8.46□□□□□ -1.06
CIITA-211ENST00000576601 V9GYV3 84 aa8.46□□□□□ -1.06
CIITA-211ENST00000576601 SRP19P09132 144 aaKnown RBP8.45□□□□□ -1.06
CIITA-211ENST00000576601 CAMPP49913 170 aa8.45□□□□□ -1.06
CIITA-211ENST00000576601 PTTG1IPP53801 180 aa8.45□□□□□ -1.06
CIITA-211ENST00000576601 Q6ZUT4 128 aa8.45□□□□□ -1.06
CIITA-211ENST00000576601 EIF5A2Q9GZV4 153 aaKnown RBP8.45□□□□□ -1.06
CIITA-211ENST00000576601 OSTCQ9NRP0 149 aa8.45□□□□□ -1.06
CIITA-211ENST00000576601 UBE2D4Q9Y2X8 147 aa8.45□□□□□ -1.06
CIITA-211ENST00000576601 ZNF727A8MUV8 499 aa8.44□□□□□ -1.06
CIITA-211ENST00000576601 ZNF561-AS1K7EIQ3 104 aa8.44□□□□□ -1.06
CIITA-211ENST00000576601 GAGE2BQ13066 116 aa8.44□□□□□ -1.06
CIITA-211ENST00000576601 NUP35Q8NFH5 326 aa8.44□□□□□ -1.06
CIITA-211ENST00000576601 FAM210AQ96ND0 272 aa8.44□□□□□ -1.06
CIITA-211ENST00000576601 A0A1W2PNN7 141 aa8.43□□□□□ -1.06
CIITA-211ENST00000576601 ISOC2Q96AB3 205 aa8.43□□□□□ -1.06
CIITA-211ENST00000576601 LINC00474Q9P2X8 69 aa8.43□□□□□ -1.06
CIITA-211ENST00000576601 TRAV13-1A0A0B4J241 112 aa8.42□□□□□ -1.06
CIITA-211ENST00000576601 COX7A2LO14548 114 aa8.42□□□□□ -1.06
CIITA-211ENST00000576601 FCER1GP30273 86 aa8.42□□□□□ -1.06
CIITA-211ENST00000576601 SUMO2P61956 95 aaKnown RBP8.42□□□□□ -1.06
CIITA-211ENST00000576601 FAM104AQ969W3 186 aa8.42□□□□□ -1.06
CIITA-211ENST00000576601 LOC107984640A0A0U1RRK4 108 aa8.41□□□□□ -1.06
CIITA-211ENST00000576601 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.41□□□□□ -1.06
CIITA-211ENST00000576601 MALP21145 153 aa8.41□□□□□ -1.06
CIITA-211ENST00000576601 MRPL51Q4U2R6 128 aaKnown RBP8.41□□□□□ -1.06
CIITA-211ENST00000576601 Q6ZRP5 223 aa8.41□□□□□ -1.06
CIITA-211ENST00000576601 C5orf38Q86SI9 138 aa8.41□□□□□ -1.06
CIITA-211ENST00000576601 C9JQL5 133 aa8.4□□□□□ -1.06
CIITA-211ENST00000576601 VCYO14598 125 aa8.4□□□□□ -1.06
CIITA-211ENST00000576601 RPL23P62829 140 aaKnown RBP8.4□□□□□ -1.06
CIITA-211ENST00000576601 RPL39P62891 51 aaKnown RBP8.4□□□□□ -1.06
CIITA-211ENST00000576601 RPL18AQ02543 176 aaKnown RBP8.4□□□□□ -1.06
CIITA-211ENST00000576601 RIGQ13278 110 aa8.4□□□□□ -1.06
CIITA-211ENST00000576601 CAMK2N2Q96S95 79 aa8.4□□□□□ -1.06
CIITA-211ENST00000576601 OPRPNQ99935 248 aaPredicted RBP8.4□□□□□ -1.06
CIITA-211ENST00000576601 PKIGQ9Y2B9 76 aa8.4□□□□□ -1.06
CIITA-211ENST00000576601 C1orf196B1AJZ1 125 aa8.39□□□□□ -1.07
CIITA-211ENST00000576601 CSDC2Q9Y534 153 aaKnown RBP8.39□□□□□ -1.07
CIITA-211ENST00000576601 APOMO95445 188 aa8.38□□□□□ -1.07
CIITA-211ENST00000576601 SPAG11BQ08648 103 aa8.38□□□□□ -1.07
CIITA-211ENST00000576601 ADIRFQ15847 76 aa8.38□□□□□ -1.07
CIITA-211ENST00000576601 C9orf116Q5BN46 136 aaPredicted RBP8.38□□□□□ -1.07
CIITA-211ENST00000576601 FAM104BQ5XKR9 115 aa8.38□□□□□ -1.07
CIITA-211ENST00000576601 PHF5AQ7RTV0 110 aaKnown RBP8.38□□□□□ -1.07
CIITA-211ENST00000576601 PSORS1C2Q9UIG4 136 aa8.38□□□□□ -1.07
CIITA-211ENST00000576601 SRSF3P84103 164 aaKnown RBP8.37□□□□□ -1.07
CIITA-211ENST00000576601 FAM74A3Q4VXF1 159 aa8.37□□□□□ -1.07
CIITA-211ENST00000576601 C2orf48Q96LS8 159 aa8.37□□□□□ -1.07
CIITA-211ENST00000576601 KIR2DL4Q99706 377 aa8.37□□□□□ -1.07
CIITA-211ENST00000576601 NAT8BQ9UHF3 227 aa8.37□□□□□ -1.07
CIITA-211ENST00000576601 SMIM27A0A1W2PRY6 76 aa8.36□□□□□ -1.07
CIITA-211ENST00000576601 FAM168BA1KXE4 195 aa8.36□□□□□ -1.07
CIITA-211ENST00000576601 KRTAP11-1Q8IUC1 163 aa8.36□□□□□ -1.07
CIITA-211ENST00000576601 TIMM21Q9BVV7 248 aa8.36□□□□□ -1.07
CIITA-211ENST00000576601 PPP1R2P9O14990 202 aa8.35□□□□□ -1.07
CIITA-211ENST00000576601 TNFRSF6BO95407 300 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms