RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 PRSS47A8MTI9 375 aa5.58□□□□□ -1.52
SMG6-216ENST00000575176 PPP1R2P9O14990 202 aa5.58□□□□□ -1.52
SMG6-216ENST00000575176 RAB14P61106 215 aa5.58□□□□□ -1.52
SMG6-216ENST00000575176 CIRBPQ14011 172 aaKnown RBP5.58□□□□□ -1.52
SMG6-216ENST00000575176 Q5VSD8 79 aa5.58□□□□□ -1.52
SMG6-216ENST00000575176 Q6ZUT4 128 aa5.58□□□□□ -1.52
SMG6-216ENST00000575176 OR5A1Q8NGJ0 315 aa5.58□□□□□ -1.52
SMG6-216ENST00000575176 ANAPC16Q96DE5 110 aa5.58□□□□□ -1.52
SMG6-216ENST00000575176 C20orf78Q9BR46 151 aa5.58□□□□□ -1.52
SMG6-216ENST00000575176 CARHSP1Q9Y2V2 147 aaKnown RBP5.58□□□□□ -1.52
SMG6-216ENST00000575176 CSDC2Q9Y534 153 aaKnown RBP5.58□□□□□ -1.52
SMG6-216ENST00000575176 PHOX2AO14813 284 aa5.57□□□□□ -1.52
SMG6-216ENST00000575176 UBE2L6O14933 153 aa5.57□□□□□ -1.52
SMG6-216ENST00000575176 PMCHP20382 165 aa5.57□□□□□ -1.52
SMG6-216ENST00000575176 RPL39P62891 51 aaKnown RBP5.57□□□□□ -1.52
SMG6-216ENST00000575176 TMEM136Q6ZRR5 245 aa5.57□□□□□ -1.52
SMG6-216ENST00000575176 COMMD7Q86VX2 200 aa5.57□□□□□ -1.52
SMG6-216ENST00000575176 C9orf163Q8N9P6 203 aa5.57□□□□□ -1.52
SMG6-216ENST00000575176 CHCHD10Q8WYQ3 142 aaPredicted RBP5.57□□□□□ -1.52
SMG6-216ENST00000575176 SEC11CQ9BY50 192 aa5.57□□□□□ -1.52
SMG6-216ENST00000575176 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.57□□□□□ -1.52
SMG6-216ENST00000575176 DMBT1Q9UGM3 2413 aaPredicted RBP5.57□□□□□ -1.52
SMG6-216ENST00000575176 GVQW2A0A096LPI5 108 aaPredicted RBP5.56□□□□□ -1.52
SMG6-216ENST00000575176 LINC00959A0A1B0GUT2 108 aa5.56□□□□□ -1.52
SMG6-216ENST00000575176 GAGE12HA6NDE8 117 aa5.56□□□□□ -1.52
SMG6-216ENST00000575176 VCYO14598 125 aa5.56□□□□□ -1.52
SMG6-216ENST00000575176 SMR3BP02814 79 aaPredicted RBP5.56□□□□□ -1.52
SMG6-216ENST00000575176 CIRBP-AS1Q8TBR5 109 aa5.56□□□□□ -1.52
SMG6-216ENST00000575176 TIMM21Q9BVV7 248 aa5.56□□□□□ -1.52
SMG6-216ENST00000575176 PPP1R17O96001 155 aa5.55□□□□□ -1.52
SMG6-216ENST00000575176 PPBPP02775 128 aa5.55□□□□□ -1.52
SMG6-216ENST00000575176 MT-ND4LP03901 98 aa5.55□□□□□ -1.52
SMG6-216ENST00000575176 CKS2P33552 79 aa5.55□□□□□ -1.52
SMG6-216ENST00000575176 C14orf177Q52M58 125 aa5.55□□□□□ -1.52
SMG6-216ENST00000575176 RNASE13Q5GAN3 156 aaKnown RBP5.55□□□□□ -1.52
SMG6-216ENST00000575176 RNASEKQ6P5S7 137 aaKnown RBP5.55□□□□□ -1.52
SMG6-216ENST00000575176 SDIM1Q6ZPB5 146 aa5.55□□□□□ -1.52
SMG6-216ENST00000575176 ORMDL3Q8N138 153 aa5.55□□□□□ -1.52
SMG6-216ENST00000575176 IMMP2LQ96T52 175 aa5.55□□□□□ -1.52
SMG6-216ENST00000575176 CHAC1Q9BUX1 264 aa5.55□□□□□ -1.52
SMG6-216ENST00000575176 F8W036 122 aa5.54□□□□□ -1.52
SMG6-216ENST00000575176 TCAPO15273 167 aa5.54□□□□□ -1.52
SMG6-216ENST00000575176 CCL25O15444 150 aa5.54□□□□□ -1.52
SMG6-216ENST00000575176 S100A8P05109 93 aa5.54□□□□□ -1.52
SMG6-216ENST00000575176 AMMECR1LQ6DCA0 310 aa5.54□□□□□ -1.52
SMG6-216ENST00000575176 DGAT2L7PQ6IED9 249 aa5.54□□□□□ -1.52
SMG6-216ENST00000575176 LINC00173Q6ZV60 143 aa5.54□□□□□ -1.52
SMG6-216ENST00000575176 ZNF664Q8N3J9 261 aa5.54□□□□□ -1.52
SMG6-216ENST00000575176 BTF3L4Q96K17 158 aa5.54□□□□□ -1.52
SMG6-216ENST00000575176 PRELID3AQ96N28 172 aa5.54□□□□□ -1.52
SMG6-216ENST00000575176 TNXBP22105 4242 aa5.54□□□□□ -1.52
SMG6-216ENST00000575176 IGKV3OR2-268A0A0C4DH90 116 aa5.53□□□□□ -1.52
SMG6-216ENST00000575176 EPM2AB3EWF7 344 aa5.53□□□□□ -1.52
SMG6-216ENST00000575176 ATP6V1G1O75348 118 aa5.53□□□□□ -1.52
SMG6-216ENST00000575176 CLRN3Q8NCR9 226 aa5.53□□□□□ -1.52
SMG6-216ENST00000575176 YPEL4Q96NS1 127 aa5.53□□□□□ -1.52
SMG6-216ENST00000575176 KIR2DL4Q99706 377 aa5.53□□□□□ -1.52
SMG6-216ENST00000575176 OPRPNQ99935 248 aaPredicted RBP5.53□□□□□ -1.52
SMG6-216ENST00000575176 LAMTOR2Q9Y2Q5 125 aa5.53□□□□□ -1.52
SMG6-216ENST00000575176 IGLV4-3A0A075B6K6 122 aa5.52□□□□□ -1.53
SMG6-216ENST00000575176 TRAV9-1A0A075B6T8 112 aa5.52□□□□□ -1.53
SMG6-216ENST00000575176 hDV102S1A0JD36 115 aa5.52□□□□□ -1.53
SMG6-216ENST00000575176 CHTF8P0CG12 524 aa5.52□□□□□ -1.53
SMG6-216ENST00000575176 FCER1GP30273 86 aa5.52□□□□□ -1.53
SMG6-216ENST00000575176 XCL1P47992 114 aa5.52□□□□□ -1.53
SMG6-216ENST00000575176 MRPS36P82909 103 aaKnown RBP5.52□□□□□ -1.53
SMG6-216ENST00000575176 HIGD2BQ4VC39 106 aa5.52□□□□□ -1.53
SMG6-216ENST00000575176 CD164L2Q6UWJ8 174 aa5.52□□□□□ -1.53
SMG6-216ENST00000575176 LINC00528Q8N1L1 170 aa5.52□□□□□ -1.53
SMG6-216ENST00000575176 SPACA4Q8TDM5 124 aa5.52□□□□□ -1.53
SMG6-216ENST00000575176 CTDSP1Q9GZU7 261 aa5.52□□□□□ -1.53
SMG6-216ENST00000575176 HMCN2Q8NDA2 5059 aa5.51□□□□□ -1.53
SMG6-216ENST00000575176 IGHV3OR16-9A0A0B4J2B5 98 aa5.51□□□□□ -1.53
SMG6-216ENST00000575176 LINC01546A6NGU7 62 aa5.51□□□□□ -1.53
SMG6-216ENST00000575176 HNRNPA3P51991 378 aaKnown RBP5.51□□□□□ -1.53
SMG6-216ENST00000575176 Q8N8P6 123 aa5.51□□□□□ -1.53
SMG6-216ENST00000575176 LINC00526Q96FQ7 95 aa5.51□□□□□ -1.53
SMG6-216ENST00000575176 SPANXA1Q9NS26 97 aa5.51□□□□□ -1.53
SMG6-216ENST00000575176 PYGO1Q9Y3Y4 419 aa5.51□□□□□ -1.53
SMG6-216ENST00000575176 RHEBQ15382 184 aa5.5□□□□□ -1.53
SMG6-216ENST00000575176 URB1-AS1Q96HZ7 61 aa5.5□□□□□ -1.53
SMG6-216ENST00000575176 TMEM101Q96IK0 257 aa5.5□□□□□ -1.53
SMG6-216ENST00000575176 A0A096LNJ9 63 aa5.49□□□□□ -1.53
SMG6-216ENST00000575176 IGHV1-58A0A0C4DH39 117 aa5.49□□□□□ -1.53
SMG6-216ENST00000575176 IGIPA6NJ69 53 aa5.49□□□□□ -1.53
SMG6-216ENST00000575176 KIAA1644Q3SXP7 199 aa5.49□□□□□ -1.53
SMG6-216ENST00000575176 ZC2HC1BQ5TFG8 222 aa5.49□□□□□ -1.53
SMG6-216ENST00000575176 PRSS3P2Q8NHM4 247 aa5.49□□□□□ -1.53
SMG6-216ENST00000575176 AMELXQ99217 191 aa5.49□□□□□ -1.53
SMG6-216ENST00000575176 ALKBH7Q9BT30 221 aaPredicted RBP5.49□□□□□ -1.53
SMG6-216ENST00000575176 GNB1LQ9BYB4 327 aa5.49□□□□□ -1.53
SMG6-216ENST00000575176 MAP1LC3AQ9H492 121 aa5.49□□□□□ -1.53
SMG6-216ENST00000575176 A0A096LNI7 61 aa5.48□□□□□ -1.53
SMG6-216ENST00000575176 TRAV13-1A0A0B4J241 112 aa5.48□□□□□ -1.53
SMG6-216ENST00000575176 LOC389332A0A1B0GUA5 103 aa5.48□□□□□ -1.53
SMG6-216ENST00000575176 C1orf196B1AJZ1 125 aa5.48□□□□□ -1.53
SMG6-216ENST00000575176 IFI27P40305 119 aaPredicted RBP5.48□□□□□ -1.53
SMG6-216ENST00000575176 LINC00242Q5T6M2 205 aa5.48□□□□□ -1.53
SMG6-216ENST00000575176 FAM19A3Q7Z5A8 133 aa5.48□□□□□ -1.53
SMG6-216ENST00000575176 PLAC8Q9NZF1 115 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms