RNA–Protein interactions for RNA: ENST00000571886.1

GTF3C1-213, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-213ENST00000571886 FGF6P10767 208 aa6.66□□□□□ -1.34
GTF3C1-213ENST00000571886 RNASEKQ6P5S7 137 aaKnown RBP6.66□□□□□ -1.34
GTF3C1-213ENST00000571886 ANAPC16Q96DE5 110 aa6.66□□□□□ -1.34
GTF3C1-213ENST00000571886 TRBV27A0A0K0K1C4 114 aa6.65□□□□□ -1.34
GTF3C1-213ENST00000571886 Q6ZSA8 131 aa6.65□□□□□ -1.34
GTF3C1-213ENST00000571886 BTF3L4Q96K17 158 aa6.65□□□□□ -1.34
GTF3C1-213ENST00000571886 FAT1Q14517 4588 aa6.65□□□□□ -1.34
GTF3C1-213ENST00000571886 VPS13BQ7Z7G8 4022 aa6.64□□□□□ -1.35
GTF3C1-213ENST00000571886 TRAV8-4A0A0B4J246 113 aa6.64□□□□□ -1.35
GTF3C1-213ENST00000571886 SLPIP03973 132 aa6.64□□□□□ -1.35
GTF3C1-213ENST00000571886 SUMO2P61956 95 aaKnown RBP6.64□□□□□ -1.35
GTF3C1-213ENST00000571886 SNRPEP62304 92 aaKnown RBP6.64□□□□□ -1.35
GTF3C1-213ENST00000571886 HBBP68871 147 aa6.64□□□□□ -1.35
GTF3C1-213ENST00000571886 S100A12P80511 92 aa6.64□□□□□ -1.35
GTF3C1-213ENST00000571886 AMMECR1LQ6DCA0 310 aa6.64□□□□□ -1.35
GTF3C1-213ENST00000571886 IMMP2LQ96T52 175 aa6.64□□□□□ -1.35
GTF3C1-213ENST00000571886 GAGE12HA6NDE8 117 aa6.63□□□□□ -1.35
GTF3C1-213ENST00000571886 H7C423 109 aa6.63□□□□□ -1.35
GTF3C1-213ENST00000571886 VCYO14598 125 aa6.63□□□□□ -1.35
GTF3C1-213ENST00000571886 PPP1R2P9O14990 202 aa6.63□□□□□ -1.35
GTF3C1-213ENST00000571886 NPYP01303 97 aa6.63□□□□□ -1.35
GTF3C1-213ENST00000571886 CKS2P33552 79 aa6.63□□□□□ -1.35
GTF3C1-213ENST00000571886 A0A1B0GW15 77 aa6.62□□□□□ -1.35
GTF3C1-213ENST00000571886 EPM2AB3EWF7 344 aa6.62□□□□□ -1.35
GTF3C1-213ENST00000571886 D6R8Y8 96 aa6.62□□□□□ -1.35
GTF3C1-213ENST00000571886 TNFRSF6BO95407 300 aa6.62□□□□□ -1.35
GTF3C1-213ENST00000571886 AKR1D1P51857 326 aa6.62□□□□□ -1.35
GTF3C1-213ENST00000571886 C14orf177Q52M58 125 aa6.62□□□□□ -1.35
GTF3C1-213ENST00000571886 Q5VSD8 79 aa6.62□□□□□ -1.35
GTF3C1-213ENST00000571886 SMIM6P0DI80 62 aa6.61□□□□□ -1.35
GTF3C1-213ENST00000571886 S100PP25815 95 aa6.61□□□□□ -1.35
GTF3C1-213ENST00000571886 LCE2DQ5TA82 110 aaPredicted RBP6.61□□□□□ -1.35
GTF3C1-213ENST00000571886 MRPL52Q86TS9 123 aaKnown RBP6.61□□□□□ -1.35
GTF3C1-213ENST00000571886 C15orf56Q8N910 161 aa6.61□□□□□ -1.35
GTF3C1-213ENST00000571886 OR5A1Q8NGJ0 315 aa6.61□□□□□ -1.35
GTF3C1-213ENST00000571886 CHCHD10Q8WYQ3 142 aaPredicted RBP6.61□□□□□ -1.35
GTF3C1-213ENST00000571886 CDC42SE2Q9NRR3 84 aa6.61□□□□□ -1.35
GTF3C1-213ENST00000571886 TGIF2-C20orf24A0A0A6YYL0 155 aa6.6□□□□□ -1.35
GTF3C1-213ENST00000571886 LINC00959A0A1B0GUT2 108 aa6.6□□□□□ -1.35
GTF3C1-213ENST00000571886 PANO1I0J062 215 aa6.6□□□□□ -1.35
GTF3C1-213ENST00000571886 PHOX2AO14813 284 aa6.6□□□□□ -1.35
GTF3C1-213ENST00000571886 TCAPO15273 167 aa6.6□□□□□ -1.35
GTF3C1-213ENST00000571886 PPP1R17O96001 155 aa6.6□□□□□ -1.35
GTF3C1-213ENST00000571886 ZNF25P17030 456 aaPredicted RBP6.6□□□□□ -1.35
GTF3C1-213ENST00000571886 FCER1GP30273 86 aa6.6□□□□□ -1.35
GTF3C1-213ENST00000571886 FABP9Q0Z7S8 132 aa6.6□□□□□ -1.35
GTF3C1-213ENST00000571886 FOXI1Q12951 378 aa6.6□□□□□ -1.35
GTF3C1-213ENST00000571886 RNASE13Q5GAN3 156 aaKnown RBP6.6□□□□□ -1.35
GTF3C1-213ENST00000571886 DGAT2L7PQ6IED9 249 aa6.6□□□□□ -1.35
GTF3C1-213ENST00000571886 SCXQ7RTU7 201 aa6.6□□□□□ -1.35
GTF3C1-213ENST00000571886 ATP5L2Q7Z4Y8 100 aa6.6□□□□□ -1.35
GTF3C1-213ENST00000571886 C9orf163Q8N9P6 203 aa6.6□□□□□ -1.35
GTF3C1-213ENST00000571886 FAM104AQ969W3 186 aa6.6□□□□□ -1.35
GTF3C1-213ENST00000571886 C12orf57Q99622 126 aa6.6□□□□□ -1.35
GTF3C1-213ENST00000571886 C20orf78Q9BR46 151 aa6.6□□□□□ -1.35
GTF3C1-213ENST00000571886 UBE2D4Q9Y2X8 147 aa6.6□□□□□ -1.35
GTF3C1-213ENST00000571886 SRRM2Q9UQ35 2752 aaKnown RBP6.6□□□□□ -1.35
GTF3C1-213ENST00000571886 TRAV9-1A0A075B6T8 112 aa6.59□□□□□ -1.35
GTF3C1-213ENST00000571886 hDV102S1A0JD36 115 aa6.59□□□□□ -1.35
GTF3C1-213ENST00000571886 RPL39P62891 51 aaKnown RBP6.59□□□□□ -1.35
GTF3C1-213ENST00000571886 RPL32P62910 135 aaKnown RBP6.59□□□□□ -1.35
GTF3C1-213ENST00000571886 HIGD2BQ4VC39 106 aa6.59□□□□□ -1.35
GTF3C1-213ENST00000571886 COA6Q5JTJ3 125 aaKnown RBP6.59□□□□□ -1.35
GTF3C1-213ENST00000571886 TMEM136Q6ZRR5 245 aa6.59□□□□□ -1.35
GTF3C1-213ENST00000571886 ZNF664Q8N3J9 261 aa6.59□□□□□ -1.35
GTF3C1-213ENST00000571886 CIRBP-AS1Q8TBR5 109 aa6.59□□□□□ -1.35
GTF3C1-213ENST00000571886 TMEM101Q96IK0 257 aa6.59□□□□□ -1.35
GTF3C1-213ENST00000571886 KIR2DL4Q99706 377 aa6.59□□□□□ -1.35
GTF3C1-213ENST00000571886 SMIM2Q9BVW6 85 aa6.59□□□□□ -1.35
GTF3C1-213ENST00000571886 CCL25O15444 150 aa6.58□□□□□ -1.36
GTF3C1-213ENST00000571886 HIST1H2BKO60814 126 aa6.58□□□□□ -1.36
GTF3C1-213ENST00000571886 HIST1H2BJP06899 126 aa6.58□□□□□ -1.36
GTF3C1-213ENST00000571886 HIST1H2BOP23527 126 aa6.58□□□□□ -1.36
GTF3C1-213ENST00000571886 HIST1H2BBP33778 126 aa6.58□□□□□ -1.36
GTF3C1-213ENST00000571886 XCL1P47992 114 aa6.58□□□□□ -1.36
GTF3C1-213ENST00000571886 HIST1H2BDP58876 126 aa6.58□□□□□ -1.36
GTF3C1-213ENST00000571886 HIST1H2BCP62807 126 aa6.58□□□□□ -1.36
GTF3C1-213ENST00000571886 HIST2H2BEQ16778 126 aa6.58□□□□□ -1.36
GTF3C1-213ENST00000571886 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.58□□□□□ -1.36
GTF3C1-213ENST00000571886 SDIM1Q6ZPB5 146 aa6.58□□□□□ -1.36
GTF3C1-213ENST00000571886 HIST1H2BHQ93079 126 aa6.58□□□□□ -1.36
GTF3C1-213ENST00000571886 HIST1H2BNQ99877 126 aa6.58□□□□□ -1.36
GTF3C1-213ENST00000571886 HIST1H2BMQ99879 126 aa6.58□□□□□ -1.36
GTF3C1-213ENST00000571886 OPRPNQ99935 248 aaPredicted RBP6.58□□□□□ -1.36
GTF3C1-213ENST00000571886 CHAC1Q9BUX1 264 aa6.58□□□□□ -1.36
GTF3C1-213ENST00000571886 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.58□□□□□ -1.36
GTF3C1-213ENST00000571886 PPBPP02775 128 aa6.57□□□□□ -1.36
GTF3C1-213ENST00000571886 TRGC2P03986 189 aa6.57□□□□□ -1.36
GTF3C1-213ENST00000571886 NDUFA6P56556 154 aa6.57□□□□□ -1.36
GTF3C1-213ENST00000571886 CNBPP62633 177 aaKnown RBP6.57□□□□□ -1.36
GTF3C1-213ENST00000571886 Q6ZUT4 128 aa6.57□□□□□ -1.36
GTF3C1-213ENST00000571886 ORMDL3Q8N138 153 aa6.57□□□□□ -1.36
GTF3C1-213ENST00000571886 LINC00526Q96FQ7 95 aa6.57□□□□□ -1.36
GTF3C1-213ENST00000571886 PRELID3AQ96N28 172 aa6.57□□□□□ -1.36
GTF3C1-213ENST00000571886 CSDC2Q9Y534 153 aaKnown RBP6.57□□□□□ -1.36
GTF3C1-213ENST00000571886 LOC389332A0A1B0GUA5 103 aa6.56□□□□□ -1.36
GTF3C1-213ENST00000571886 FAM229AH3BQW9 127 aa6.56□□□□□ -1.36
GTF3C1-213ENST00000571886 INAFM2P0DMQ5 153 aa6.56□□□□□ -1.36
GTF3C1-213ENST00000571886 S100A2P29034 98 aa6.56□□□□□ -1.36
GTF3C1-213ENST00000571886 LINC00528Q8N1L1 170 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms